RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 LINC00304Q8N9R0 145 aa3.37□□□□□ -1.87
VPS33B-207ENST00000557470 TRAV7A0A075B6U4 112 aa3.36□□□□□ -1.87
VPS33B-207ENST00000557470 TRAV13-2A0A0B4J235 113 aa3.36□□□□□ -1.87
VPS33B-207ENST00000557470 TRBV10-3A0A0K0K1G6 114 aa3.36□□□□□ -1.87
VPS33B-207ENST00000557470 SMIM2Q9BVW6 85 aa3.36□□□□□ -1.87
VPS33B-207ENST00000557470 XAGE1AQ9HD64 81 aa3.36□□□□□ -1.87
VPS33B-207ENST00000557470 A8MUN3 132 aa3.35□□□□□ -1.87
VPS33B-207ENST00000557470 H7BZZ5 65 aa3.35□□□□□ -1.87
VPS33B-207ENST00000557470 ZNF22P17026 224 aaPredicted RBP3.35□□□□□ -1.87
VPS33B-207ENST00000557470 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
VPS33B-207ENST00000557470 C8orf17Q9NRJ1 99 aa3.35□□□□□ -1.87
VPS33B-207ENST00000557470 IGKV2-30P06310 120 aa3.34□□□□□ -1.87
VPS33B-207ENST00000557470 FAM229BQ4G0N7 80 aa3.34□□□□□ -1.87
VPS33B-207ENST00000557470 KRTAP13-1Q8IUC0 172 aa3.34□□□□□ -1.87
VPS33B-207ENST00000557470 TOMM6Q96B49 74 aa3.34□□□□□ -1.87
VPS33B-207ENST00000557470 M0R378 163 aa3.33□□□□□ -1.88
VPS33B-207ENST00000557470 ERC2-IT1O76042 136 aa3.33□□□□□ -1.88
VPS33B-207ENST00000557470 DNAL4O96015 105 aa3.33□□□□□ -1.88
VPS33B-207ENST00000557470 Q1T7F1 81 aa3.33□□□□□ -1.88
VPS33B-207ENST00000557470 LCA10Q71F78 164 aa3.33□□□□□ -1.88
VPS33B-207ENST00000557470 LINC00167Q96N53 147 aa3.33□□□□□ -1.88
VPS33B-207ENST00000557470 TTTY13Q9BZ97 58 aa3.33□□□□□ -1.88
VPS33B-207ENST00000557470 CYSTM1Q9H1C7 97 aa3.33□□□□□ -1.88
VPS33B-207ENST00000557470 TOMM7Q9P0U1 55 aa3.33□□□□□ -1.88
VPS33B-207ENST00000557470 TMEM223A0PJW6 202 aa3.32□□□□□ -1.88
VPS33B-207ENST00000557470 TMEM256-PLSCR3K7ERE1 68 aa3.32□□□□□ -1.88
VPS33B-207ENST00000557470 BPY2O14599 106 aa3.32□□□□□ -1.88
VPS33B-207ENST00000557470 ZNF73O43830 326 aaPredicted RBP3.32□□□□□ -1.88
VPS33B-207ENST00000557470 ASB16-AS1Q495Z4 193 aa3.32□□□□□ -1.88
VPS33B-207ENST00000557470 SFTA2Q6UW10 78 aa3.32□□□□□ -1.88
VPS33B-207ENST00000557470 Q8IZM0 81 aa3.32□□□□□ -1.88
VPS33B-207ENST00000557470 C20orf197Q8N268 126 aa3.32□□□□□ -1.88
VPS33B-207ENST00000557470 SMCR5Q8TEV8 140 aa3.32□□□□□ -1.88
VPS33B-207ENST00000557470 TMEM141Q96I45 108 aa3.32□□□□□ -1.88
VPS33B-207ENST00000557470 A0A1B0GVX0 72 aa3.31□□□□□ -1.88
VPS33B-207ENST00000557470 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
VPS33B-207ENST00000557470 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
VPS33B-207ENST00000557470 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
VPS33B-207ENST00000557470 SCGB3A1Q96QR1 104 aa3.31□□□□□ -1.88
VPS33B-207ENST00000557470 IGIPA6NJ69 53 aa3.3□□□□□ -1.88
VPS33B-207ENST00000557470 PRLHP81277 87 aa3.3□□□□□ -1.88
VPS33B-207ENST00000557470 ATP11AUNQ6ZP68 121 aa3.3□□□□□ -1.88
VPS33B-207ENST00000557470 C7orf65Q6ZTY9 151 aa3.3□□□□□ -1.88
VPS33B-207ENST00000557470 AMELXQ99217 191 aa3.3□□□□□ -1.88
VPS33B-207ENST00000557470 IGKV2-28A0A075B6P5 120 aa3.29□□□□□ -1.88
VPS33B-207ENST00000557470 A0A1B0GW54 56 aa3.29□□□□□ -1.88
VPS33B-207ENST00000557470 C11orf86A6NJI1 115 aa3.29□□□□□ -1.88
VPS33B-207ENST00000557470 IGKV2D-28P01615 120 aa3.29□□□□□ -1.88
VPS33B-207ENST00000557470 CDKN2A-AS1Q9UH64 79 aa3.29□□□□□ -1.88
VPS33B-207ENST00000557470 F8WEM9 126 aa3.28□□□□□ -1.88
VPS33B-207ENST00000557470 K7ERS5 55 aa3.28□□□□□ -1.88
VPS33B-207ENST00000557470 H7C2G1 150 aa3.27□□□□□ -1.89
VPS33B-207ENST00000557470 LEPROTO15243 131 aa3.27□□□□□ -1.89
VPS33B-207ENST00000557470 BAALC-AS2P0C853 105 aa3.27□□□□□ -1.89
VPS33B-207ENST00000557470 SPAG11AQ6PDA7 123 aa3.27□□□□□ -1.89
VPS33B-207ENST00000557470 MT1HP80294 61 aa3.26□□□□□ -1.89
VPS33B-207ENST00000557470 KRTAP19-2Q3LHN2 52 aa3.26□□□□□ -1.89
VPS33B-207ENST00000557470 COX7B2Q8TF08 81 aa3.26□□□□□ -1.89
VPS33B-207ENST00000557470 CYP4F30PQ9H0H9 118 aa3.26□□□□□ -1.89
VPS33B-207ENST00000557470 IGKV3D-7A0A0C4DH55 119 aa3.25□□□□□ -1.89
VPS33B-207ENST00000557470 MUSTN1Q8IVN3 82 aa3.25□□□□□ -1.89
VPS33B-207ENST00000557470 SPRR4Q96PI1 79 aa3.25□□□□□ -1.89
VPS33B-207ENST00000557470 HIGD2AQ9BW72 106 aa3.25□□□□□ -1.89
VPS33B-207ENST00000557470 UBL5Q9BZL1 73 aa3.25□□□□□ -1.89
VPS33B-207ENST00000557470 Q8NDZ9 215 aa3.24□□□□□ -1.89
VPS33B-207ENST00000557470 OBSCN-AS1Q96MR7 158 aa3.24□□□□□ -1.89
VPS33B-207ENST00000557470 JMJD7-PLA2G4BH0Y9G9 81 aa3.23□□□□□ -1.89
VPS33B-207ENST00000557470 SPINK1P00995 79 aa3.23□□□□□ -1.89
VPS33B-207ENST00000557470 CLEC2BQ92478 149 aa3.23□□□□□ -1.89
VPS33B-207ENST00000557470 LIMD2Q9BT23 127 aa3.23□□□□□ -1.89
VPS33B-207ENST00000557470 KRTAP2-2Q9BYT5 123 aa3.23□□□□□ -1.89
VPS33B-207ENST00000557470 IGKV2D-30A0A075B6S6 120 aa3.22□□□□□ -1.89
VPS33B-207ENST00000557470 TRAV23DV6A0A075B6W5 121 aa3.22□□□□□ -1.89
VPS33B-207ENST00000557470 A0A087WVE0 104 aa3.22□□□□□ -1.89
VPS33B-207ENST00000557470 KRTAP10-6P60371 365 aaPredicted RBP3.22□□□□□ -1.89
VPS33B-207ENST00000557470 SOSTDC1Q6X4U4 206 aa3.22□□□□□ -1.89
VPS33B-207ENST00000557470 NDUFA12Q9UI09 145 aa3.22□□□□□ -1.89
VPS33B-207ENST00000557470 hDV103S1A0JD37 113 aa3.21□□□□□ -1.9
VPS33B-207ENST00000557470 A6NN06 94 aa3.21□□□□□ -1.9
VPS33B-207ENST00000557470 H0YGX0 51 aa3.21□□□□□ -1.9
VPS33B-207ENST00000557470 LINC01554Q52M75 96 aa3.21□□□□□ -1.9
VPS33B-207ENST00000557470 LINC00846Q9NV44 126 aa3.21□□□□□ -1.9
VPS33B-207ENST00000557470 TRBV7-4A0A0J9YYF1 115 aa3.2□□□□□ -1.9
VPS33B-207ENST00000557470 A6NED7 52 aa3.2□□□□□ -1.9
VPS33B-207ENST00000557470 H3BQ85 93 aa3.2□□□□□ -1.9
VPS33B-207ENST00000557470 TSPEAR-AS2P59090 65 aa3.2□□□□□ -1.9
VPS33B-207ENST00000557470 TMEM254Q8TBM7 123 aa3.2□□□□□ -1.9
VPS33B-207ENST00000557470 TRAV22A0A0B4J277 110 aa3.19□□□□□ -1.9
VPS33B-207ENST00000557470 A8MWP4 228 aa3.19□□□□□ -1.9
VPS33B-207ENST00000557470 PDE6GP18545 87 aa3.19□□□□□ -1.9
VPS33B-207ENST00000557470 RPS29P62273 56 aaKnown RBP3.19□□□□□ -1.9
VPS33B-207ENST00000557470 MOBPQ13875 183 aa3.19□□□□□ -1.9
VPS33B-207ENST00000557470 LINC00483Q53H64 154 aa3.19□□□□□ -1.9
VPS33B-207ENST00000557470 PCOTHQ58A44 107 aa3.19□□□□□ -1.9
VPS33B-207ENST00000557470 ZNF625Q96I27 306 aaPredicted RBP3.19□□□□□ -1.9
VPS33B-207ENST00000557470 SNURFQ9Y675 71 aa3.19□□□□□ -1.9
VPS33B-207ENST00000557470 COX17Q14061 63 aa3.18□□□□□ -1.9
VPS33B-207ENST00000557470 CDC42SE1Q9NRR8 79 aa3.18□□□□□ -1.9
VPS33B-207ENST00000557470 HCG22E2RYF7 251 aa3.17□□□□□ -1.9
VPS33B-207ENST00000557470 M0R2T5 61 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms