RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 A0A087X002 238 aa10.83□□□□□ -0.68
SDR39U1-220ENST00000556548 WFDC13Q8IUB5 93 aa10.78□□□□□ -0.68
SDR39U1-220ENST00000556548 Q96NJ1 140 aa10.78□□□□□ -0.68
SDR39U1-220ENST00000556548 HCG22E2RYF7 251 aa10.78□□□□□ -0.68
SDR39U1-220ENST00000556548 KRTAP13-2Q52LG2 175 aa10.77□□□□□ -0.69
SDR39U1-220ENST00000556548 ZCCHC13Q8WW36 166 aaKnown RBP10.77□□□□□ -0.69
SDR39U1-220ENST00000556548 A8MWP4 228 aa10.76□□□□□ -0.69
SDR39U1-220ENST00000556548 CYP4F30PQ9H0H9 118 aa10.76□□□□□ -0.69
SDR39U1-220ENST00000556548 APOBP04114 4563 aaKnown RBP10.75□□□□□ -0.69
SDR39U1-220ENST00000556548 KRTAP1-4P0C5Y4 121 aa10.74□□□□□ -0.69
SDR39U1-220ENST00000556548 SSBP3-AS1Q7Z2R9 100 aa10.73□□□□□ -0.69
SDR39U1-220ENST00000556548 RYR3Q15413 4870 aa10.73□□□□□ -0.69
SDR39U1-220ENST00000556548 FAT1Q14517 4588 aa10.72□□□□□ -0.69
SDR39U1-220ENST00000556548 A8MUN3 132 aa10.72□□□□□ -0.69
SDR39U1-220ENST00000556548 PLA2G1BP04054 148 aaKnown RBP10.7□□□□□ -0.7
SDR39U1-220ENST00000556548 SPINK6Q6UWN8 80 aa10.7□□□□□ -0.7
SDR39U1-220ENST00000556548 KTN1-AS1Q86SY8 53 aa10.69□□□□□ -0.7
SDR39U1-220ENST00000556548 NDUFB1O75438 58 aa10.68□□□□□ -0.7
SDR39U1-220ENST00000556548 CASC2Q6XLA1 102 aa10.67□□□□□ -0.7
SDR39U1-220ENST00000556548 Q5VV11 94 aa10.67□□□□□ -0.7
SDR39U1-220ENST00000556548 IGHV6-1A0A0B4J1U7 121 aa10.65□□□□□ -0.7
SDR39U1-220ENST00000556548 A8MU10 97 aa10.65□□□□□ -0.7
SDR39U1-220ENST00000556548 KRTAP29-1A8MX34 341 aaPredicted RBP10.65□□□□□ -0.7
SDR39U1-220ENST00000556548 PRR4Q16378 134 aa10.64□□□□□ -0.71
SDR39U1-220ENST00000556548 RBM12B-AS1Q9P1G2 102 aa10.64□□□□□ -0.71
SDR39U1-220ENST00000556548 CDK2AP2O75956 126 aa10.63□□□□□ -0.71
SDR39U1-220ENST00000556548 MMP24-AS1A0A0U1RRL7 71 aa10.63□□□□□ -0.71
SDR39U1-220ENST00000556548 TYMSOSQ8TAI1 123 aa10.61□□□□□ -0.71
SDR39U1-220ENST00000556548 CHKB-CPT1BH3BT56 60 aa10.6□□□□□ -0.71
SDR39U1-220ENST00000556548 A0A1B0GVX0 72 aa10.59□□□□□ -0.71
SDR39U1-220ENST00000556548 LIMD2Q9BT23 127 aa10.59□□□□□ -0.71
SDR39U1-220ENST00000556548 PRR26Q8N8Z3 221 aa10.59□□□□□ -0.71
SDR39U1-220ENST00000556548 NOTCH2NLQ7Z3S9 236 aa10.58□□□□□ -0.72
SDR39U1-220ENST00000556548 C8orf17Q9NRJ1 99 aa10.58□□□□□ -0.72
SDR39U1-220ENST00000556548 KRTAP10-4P60372 401 aaPredicted RBP10.57□□□□□ -0.72
SDR39U1-220ENST00000556548 NDUFS5O43920 106 aa10.56□□□□□ -0.72
SDR39U1-220ENST00000556548 ATP11AUNQ6ZP68 121 aa10.56□□□□□ -0.72
SDR39U1-220ENST00000556548 Q8N9P0 234 aaPredicted RBP10.55□□□□□ -0.72
SDR39U1-220ENST00000556548 SPTSSBQ8NFR3 76 aa10.54□□□□□ -0.72
SDR39U1-220ENST00000556548 C4orf48Q5BLP8 95 aa10.53□□□□□ -0.72
SDR39U1-220ENST00000556548 MP68P56378 58 aa10.52□□□□□ -0.73
SDR39U1-220ENST00000556548 ASB16-AS1Q495Z4 193 aa10.51□□□□□ -0.73
SDR39U1-220ENST00000556548 PRR15LQ9BU68 103 aa10.51□□□□□ -0.73
SDR39U1-220ENST00000556548 LINC00208Q96KT6 92 aa10.51□□□□□ -0.73
SDR39U1-220ENST00000556548 SPANXA2-OT1Q8N9U9 137 aa10.5□□□□□ -0.73
SDR39U1-220ENST00000556548 A6NN06 94 aa10.48□□□□□ -0.73
SDR39U1-220ENST00000556548 LCA10Q71F78 164 aa10.48□□□□□ -0.73
SDR39U1-220ENST00000556548 Q75L30 129 aa10.47□□□□□ -0.73
SDR39U1-220ENST00000556548 LINC00304Q8N9R0 145 aa10.45□□□□□ -0.74
SDR39U1-220ENST00000556548 A6NED7 52 aa10.45□□□□□ -0.74
SDR39U1-220ENST00000556548 MRPL34Q9BQ48 92 aaKnown RBP10.45□□□□□ -0.74
SDR39U1-220ENST00000556548 HSPG2P98160 4391 aa10.44□□□□□ -0.74
SDR39U1-220ENST00000556548 H0Y9P7 68 aa10.44□□□□□ -0.74
SDR39U1-220ENST00000556548 SPINK1P00995 79 aa10.44□□□□□ -0.74
SDR39U1-220ENST00000556548 LOC101927531A0A1B0GV80 90 aa10.43□□□□□ -0.74
SDR39U1-220ENST00000556548 FAM229AH3BQW9 127 aa10.42□□□□□ -0.74
SDR39U1-220ENST00000556548 H3BPC8 53 aa10.4□□□□□ -0.74
SDR39U1-220ENST00000556548 C7orf65Q6ZTY9 151 aa10.4□□□□□ -0.74
SDR39U1-220ENST00000556548 CDC42SE1Q9NRR8 79 aa10.4□□□□□ -0.74
SDR39U1-220ENST00000556548 LINC00313P59037 77 aa10.38□□□□□ -0.75
SDR39U1-220ENST00000556548 Q5VSD8 79 aa10.38□□□□□ -0.75
SDR39U1-220ENST00000556548 RYR1P21817 5038 aa10.37□□□□□ -0.75
SDR39U1-220ENST00000556548 TP53AIP1Q9HCN2 124 aa10.36□□□□□ -0.75
SDR39U1-220ENST00000556548 C8orf87E5RJ46 101 aa10.35□□□□□ -0.75
SDR39U1-220ENST00000556548 PKHD1L1Q86WI1 4243 aa10.34□□□□□ -0.75
SDR39U1-220ENST00000556548 LRP1Q07954 4544 aaKnown RBP10.34□□□□□ -0.75
SDR39U1-220ENST00000556548 SPAG11AQ6PDA7 123 aa10.34□□□□□ -0.75
SDR39U1-220ENST00000556548 EPPK1P58107 5090 aaKnown RBP10.33□□□□□ -0.76
SDR39U1-220ENST00000556548 KRTAP17-1Q9BYP8 105 aa10.33□□□□□ -0.76
SDR39U1-220ENST00000556548 KIAA1109Q2LD37 5005 aa10.32□□□□□ -0.76
SDR39U1-220ENST00000556548 COA5Q86WW8 74 aa10.32□□□□□ -0.76
SDR39U1-220ENST00000556548 Q5W150 140 aa10.29□□□□□ -0.76
SDR39U1-220ENST00000556548 RPS29P62273 56 aaKnown RBP10.28□□□□□ -0.76
SDR39U1-220ENST00000556548 RETNLBQ9BQ08 111 aa10.28□□□□□ -0.76
SDR39U1-220ENST00000556548 KRTAP16-1A8MUX0 517 aa10.25□□□□□ -0.77
SDR39U1-220ENST00000556548 LINC01558Q9Y6Z2 57 aa10.25□□□□□ -0.77
SDR39U1-220ENST00000556548 IGLV7-46A0A075B6I9 117 aa10.24□□□□□ -0.77
SDR39U1-220ENST00000556548 PCOTHQ58A44 107 aa10.23□□□□□ -0.77
SDR39U1-220ENST00000556548 TNXBP22105 4242 aa10.21□□□□□ -0.78
SDR39U1-220ENST00000556548 Q8N1X5 172 aa10.21□□□□□ -0.78
SDR39U1-220ENST00000556548 KRTAP13-3Q3SY46 172 aa10.18□□□□□ -0.78
SDR39U1-220ENST00000556548 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
SDR39U1-220ENST00000556548 C9orf92A6NGG3 77 aa10.17□□□□□ -0.78
SDR39U1-220ENST00000556548 MYCBP2O75592 4640 aa10.16□□□□□ -0.78
SDR39U1-220ENST00000556548 KRTAP10-8P60410 259 aa10.15□□□□□ -0.79
SDR39U1-220ENST00000556548 FAT3Q8TDW7 4589 aa10.14□□□□□ -0.79
SDR39U1-220ENST00000556548 SPINK7P58062 85 aa10.14□□□□□ -0.79
SDR39U1-220ENST00000556548 DMBT1Q9UGM3 2413 aaPredicted RBP10.04□□□□□ -0.8
SDR39U1-220ENST00000556548 PRAC1Q96KF2 57 aa10.02□□□□□ -0.81
SDR39U1-220ENST00000556548 IGKV2D-30A0A075B6S6 120 aa10.01□□□□□ -0.81
SDR39U1-220ENST00000556548 IGKV2-30P06310 120 aa10.01□□□□□ -0.81
SDR39U1-220ENST00000556548 H3BS24 57 aa10.01□□□□□ -0.81
SDR39U1-220ENST00000556548 HRES1P13985 223 aa10.01□□□□□ -0.81
SDR39U1-220ENST00000556548 LINC01554Q52M75 96 aa10.01□□□□□ -0.81
SDR39U1-220ENST00000556548 MT1HL1P0DM35 61 aa9.98□□□□□ -0.81
SDR39U1-220ENST00000556548 KRTAP4-5Q9BYR2 181 aa9.98□□□□□ -0.81
SDR39U1-220ENST00000556548 C20orf166-AS1Q96NR2 134 aa9.94□□□□□ -0.82
SDR39U1-220ENST00000556548 A8MUU9 505 aa9.93□□□□□ -0.82
SDR39U1-220ENST00000556548 ADM2Q7Z4H4 148 aa9.92□□□□□ -0.82
SDR39U1-220ENST00000556548 ABCA13Q86UQ4 5058 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms