RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
GTF2A1-204ENST00000556268 OCR1Q9BZK8 76 aa4.43□□□□□ -1.7
GTF2A1-204ENST00000556268 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
GTF2A1-204ENST00000556268 SNHG12Q9BXW3 62 aa4.42□□□□□ -1.7
GTF2A1-204ENST00000556268 KRTDAPP60985 99 aa4.41□□□□□ -1.7
GTF2A1-204ENST00000556268 H3BUT2 72 aa4.4□□□□□ -1.71
GTF2A1-204ENST00000556268 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.71
GTF2A1-204ENST00000556268 TEN1Q86WV5 123 aa4.4□□□□□ -1.71
GTF2A1-204ENST00000556268 SS18L2Q9UHA2 77 aa4.4□□□□□ -1.71
GTF2A1-204ENST00000556268 HRES1P13985 223 aa4.39□□□□□ -1.71
GTF2A1-204ENST00000556268 ATOH7Q8N100 152 aa4.39□□□□□ -1.71
GTF2A1-204ENST00000556268 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
GTF2A1-204ENST00000556268 BVES-AS1Q5T3Y7 98 aa4.37□□□□□ -1.71
GTF2A1-204ENST00000556268 LINC00846Q9NV44 126 aa4.36□□□□□ -1.71
GTF2A1-204ENST00000556268 A0A087WSZ3 146 aa4.35□□□□□ -1.71
GTF2A1-204ENST00000556268 FAM236DA0A1B0GTK5 79 aa4.35□□□□□ -1.71
GTF2A1-204ENST00000556268 FAM236CP0DP71 79 aa4.35□□□□□ -1.71
GTF2A1-204ENST00000556268 LINC00313P59037 77 aa4.35□□□□□ -1.71
GTF2A1-204ENST00000556268 RBM12B-AS1Q9P1G2 102 aa4.35□□□□□ -1.71
GTF2A1-204ENST00000556268 A0A1W2PNM2 257 aa4.33□□□□□ -1.72
GTF2A1-204ENST00000556268 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
GTF2A1-204ENST00000556268 C12orf57Q99622 126 aa4.33□□□□□ -1.72
GTF2A1-204ENST00000556268 Q6ZVQ6 151 aa4.32□□□□□ -1.72
GTF2A1-204ENST00000556268 H0YGX0 51 aa4.31□□□□□ -1.72
GTF2A1-204ENST00000556268 H3BMG7 143 aa4.31□□□□□ -1.72
GTF2A1-204ENST00000556268 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
GTF2A1-204ENST00000556268 SNCGO76070 127 aa4.3□□□□□ -1.72
GTF2A1-204ENST00000556268 LINC00472Q9H8W2 130 aa4.3□□□□□ -1.72
GTF2A1-204ENST00000556268 IGKV4-1P06312 121 aa4.29□□□□□ -1.72
GTF2A1-204ENST00000556268 TRBV7-4A0A0J9YYF1 115 aa4.28□□□□□ -1.72
GTF2A1-204ENST00000556268 A0A1B0GX51 115 aa4.28□□□□□ -1.72
GTF2A1-204ENST00000556268 HIST1H4GQ99525 98 aa4.28□□□□□ -1.72
GTF2A1-204ENST00000556268 SIGMAR1Q99720 223 aa4.28□□□□□ -1.72
GTF2A1-204ENST00000556268 HSBP1L1C9JCN9 74 aa4.27□□□□□ -1.73
GTF2A1-204ENST00000556268 MTURNQ8N3F0 131 aa4.27□□□□□ -1.73
GTF2A1-204ENST00000556268 DLEU1O43261 78 aa4.26□□□□□ -1.73
GTF2A1-204ENST00000556268 HIST1H2BLQ99880 126 aa4.26□□□□□ -1.73
GTF2A1-204ENST00000556268 COX8AP10176 69 aa4.25□□□□□ -1.73
GTF2A1-204ENST00000556268 FABP2P12104 132 aa4.25□□□□□ -1.73
GTF2A1-204ENST00000556268 SPINK7P58062 85 aa4.25□□□□□ -1.73
GTF2A1-204ENST00000556268 HIST3H2BBQ8N257 126 aa4.25□□□□□ -1.73
GTF2A1-204ENST00000556268 ANKRD29Q8N6D5 301 aa4.25□□□□□ -1.73
GTF2A1-204ENST00000556268 A0A0B4J2C4 111 aa4.24□□□□□ -1.73
GTF2A1-204ENST00000556268 A8MWP4 228 aa4.24□□□□□ -1.73
GTF2A1-204ENST00000556268 DEFB116Q30KQ4 102 aa4.24□□□□□ -1.73
GTF2A1-204ENST00000556268 IGHV6-1A0A0B4J1U7 121 aa4.23□□□□□ -1.73
GTF2A1-204ENST00000556268 RAB37Q96AX2 223 aa4.23□□□□□ -1.73
GTF2A1-204ENST00000556268 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
GTF2A1-204ENST00000556268 C8orf87E5RJ46 101 aa4.22□□□□□ -1.73
GTF2A1-204ENST00000556268 ZCCHC13Q8WW36 166 aaKnown RBP4.22□□□□□ -1.73
GTF2A1-204ENST00000556268 HIGD1BQ9P298 99 aa4.22□□□□□ -1.73
GTF2A1-204ENST00000556268 NEBP20929 6669 aa4.21□□□□□ -1.73
GTF2A1-204ENST00000556268 A0A1B0GVX0 72 aa4.2□□□□□ -1.74
GTF2A1-204ENST00000556268 H3BQ85 93 aa4.2□□□□□ -1.74
GTF2A1-204ENST00000556268 S100A2P29034 98 aa4.2□□□□□ -1.74
GTF2A1-204ENST00000556268 PRO1854Q9UHT4 67 aa4.2□□□□□ -1.74
GTF2A1-204ENST00000556268 TMEM256-PLSCR3K7ERE1 68 aa4.18□□□□□ -1.74
GTF2A1-204ENST00000556268 CCKP06307 115 aa4.18□□□□□ -1.74
GTF2A1-204ENST00000556268 TRACP01848 142 aa4.17□□□□□ -1.74
GTF2A1-204ENST00000556268 C2orf91Q6ZV80 131 aa4.17□□□□□ -1.74
GTF2A1-204ENST00000556268 CEND1Q8N111 149 aa4.17□□□□□ -1.74
GTF2A1-204ENST00000556268 C14orf144Q96I85 54 aa4.17□□□□□ -1.74
GTF2A1-204ENST00000556268 ORMDL1Q9P0S3 153 aa4.17□□□□□ -1.74
GTF2A1-204ENST00000556268 PRO0461Q9UI25 63 aa4.16□□□□□ -1.74
GTF2A1-204ENST00000556268 WFDC13Q8IUB5 93 aa4.15□□□□□ -1.75
GTF2A1-204ENST00000556268 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
GTF2A1-204ENST00000556268 J3KT08 172 aa4.14□□□□□ -1.75
GTF2A1-204ENST00000556268 A0A1B0GV72 72 aa4.13□□□□□ -1.75
GTF2A1-204ENST00000556268 DNAL4O96015 105 aa4.13□□□□□ -1.75
GTF2A1-204ENST00000556268 FXYD2P54710 66 aa4.13□□□□□ -1.75
GTF2A1-204ENST00000556268 RBM3P98179 157 aaKnown RBP4.12□□□□□ -1.75
GTF2A1-204ENST00000556268 H1FX-AS1Q4G0G2 97 aa4.12□□□□□ -1.75
GTF2A1-204ENST00000556268 S100A6P06703 90 aa4.11□□□□□ -1.75
GTF2A1-204ENST00000556268 Q6ZQT0 140 aa4.11□□□□□ -1.75
GTF2A1-204ENST00000556268 SPATA45Q537H7 98 aa4.1□□□□□ -1.75
GTF2A1-204ENST00000556268 C8orf17Q9NRJ1 99 aa4.1□□□□□ -1.75
GTF2A1-204ENST00000556268 NDUFB1O75438 58 aa4.09□□□□□ -1.75
GTF2A1-204ENST00000556268 COX6CP09669 75 aa4.09□□□□□ -1.75
GTF2A1-204ENST00000556268 DSCR8Q96T75 97 aa4.09□□□□□ -1.75
GTF2A1-204ENST00000556268 IGKV3D-7A0A0C4DH55 119 aa4.08□□□□□ -1.76
GTF2A1-204ENST00000556268 VPS25Q9BRG1 176 aa4.08□□□□□ -1.76
GTF2A1-204ENST00000556268 PSMB2P49721 201 aa4.07□□□□□ -1.76
GTF2A1-204ENST00000556268 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
GTF2A1-204ENST00000556268 A0A1B0GW54 56 aa4.06□□□□□ -1.76
GTF2A1-204ENST00000556268 C9JAW5 83 aa4.06□□□□□ -1.76
GTF2A1-204ENST00000556268 MT1BP07438 61 aa4.06□□□□□ -1.76
GTF2A1-204ENST00000556268 LYRM7Q5U5X0 104 aa4.06□□□□□ -1.76
GTF2A1-204ENST00000556268 VAMP8Q9BV40 100 aa4.06□□□□□ -1.76
GTF2A1-204ENST00000556268 A6NN06 94 aa4.05□□□□□ -1.76
GTF2A1-204ENST00000556268 K7ERJ3 54 aa4.05□□□□□ -1.76
GTF2A1-204ENST00000556268 PRR15Q8IV56 129 aa4.05□□□□□ -1.76
GTF2A1-204ENST00000556268 BAALC-AS2P0C853 105 aa4.04□□□□□ -1.76
GTF2A1-204ENST00000556268 HSD52Q0P140 79 aa4.03□□□□□ -1.76
GTF2A1-204ENST00000556268 KRTAP19-8Q3LI54 63 aa4.03□□□□□ -1.76
GTF2A1-204ENST00000556268 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
GTF2A1-204ENST00000556268 S100A1P23297 94 aa4.02□□□□□ -1.77
GTF2A1-204ENST00000556268 LOC110117498A0A087WWA1 95 aa4.01□□□□□ -1.77
GTF2A1-204ENST00000556268 TMEM254Q8TBM7 123 aa4.01□□□□□ -1.77
GTF2A1-204ENST00000556268 MRPL34Q9BQ48 92 aaKnown RBP4.01□□□□□ -1.77
GTF2A1-204ENST00000556268 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms