RNA–Protein interactions for RNA: ENST00000555175.1

PSMC6-209, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-209ENST00000555175 S4R3F8 94 aa1.05□□□□□ -2.24
PSMC6-209ENST00000555175 F8P00451 2351 aa1.05□□□□□ -2.24
PSMC6-209ENST00000555175 SONP18583 2426 aaKnown RBP1.05□□□□□ -2.24
PSMC6-209ENST00000555175 ZZEF1O43149 2961 aa1.05□□□□□ -2.24
PSMC6-209ENST00000555175 JMJD1CQ15652 2540 aa1.05□□□□□ -2.24
PSMC6-209ENST00000555175 USP9XQ93008 2570 aaPredicted RBP1.04□□□□□ -2.24
PSMC6-209ENST00000555175 PTPN13Q12923 2485 aa1.04□□□□□ -2.24
PSMC6-209ENST00000555175 CEP350Q5VT06 3117 aa1.04□□□□□ -2.24
PSMC6-209ENST00000555175 DEFB123Q8N688 67 aa1.04□□□□□ -2.24
PSMC6-209ENST00000555175 DSPP15924 2871 aaKnown RBP1.04□□□□□ -2.24
PSMC6-209ENST00000555175 CCDC168Q8NDH2 2452 aa1.04□□□□□ -2.24
PSMC6-209ENST00000555175 UBR5O95071 2799 aaPredicted RBP1.03□□□□□ -2.24
PSMC6-209ENST00000555175 APCP25054 2843 aa1.03□□□□□ -2.24
PSMC6-209ENST00000555175 CHD7Q9P2D1 2997 aa1.03□□□□□ -2.24
PSMC6-209ENST00000555175 M0QZ58 72 aa1.03□□□□□ -2.24
PSMC6-209ENST00000555175 SETXQ7Z333 2677 aaKnown RBP1.03□□□□□ -2.24
PSMC6-209ENST00000555175 DNAH12Q6ZR08 3092 aa1.03□□□□□ -2.24
PSMC6-209ENST00000555175 GCN1Q92616 2671 aaKnown RBP1.02□□□□□ -2.25
PSMC6-209ENST00000555175 TEX15Q9BXT5 2789 aa1.02□□□□□ -2.25
PSMC6-209ENST00000555175 TACC2O95359 2948 aa1.02□□□□□ -2.25
PSMC6-209ENST00000555175 MTORP42345 2549 aa1.02□□□□□ -2.25
PSMC6-209ENST00000555175 HIVEP3Q5T1R4 2406 aa1.02□□□□□ -2.25
PSMC6-209ENST00000555175 ZFYVE26Q68DK2 2539 aa1.02□□□□□ -2.25
PSMC6-209ENST00000555175 CEP295Q9C0D2 2601 aa1.02□□□□□ -2.25
PSMC6-209ENST00000555175 CHD9Q3L8U1 2897 aa1.02□□□□□ -2.25
PSMC6-209ENST00000555175 UTP20O75691 2785 aaKnown RBP1.02□□□□□ -2.25
PSMC6-209ENST00000555175 CENPEQ02224 2701 aa1.01□□□□□ -2.25
PSMC6-209ENST00000555175 ANKRD11Q6UB99 2663 aaPredicted RBP1.01□□□□□ -2.25
PSMC6-209ENST00000555175 RPS29P62273 56 aaKnown RBP1.01□□□□□ -2.25
PSMC6-209ENST00000555175 DOPEY1Q5JWR5 2465 aa1.01□□□□□ -2.25
PSMC6-209ENST00000555175 FAM208BQ5VWN6 2430 aa1□□□□□ -2.25
PSMC6-209ENST00000555175 KALRNO60229 2985 aa1□□□□□ -2.25
PSMC6-209ENST00000555175 LRBAP50851 2863 aa1□□□□□ -2.25
PSMC6-209ENST00000555175 ASH1LQ9NR48 2969 aaKnown RBP1□□□□□ -2.25
PSMC6-209ENST00000555175 UNC79Q9P2D8 2635 aa1□□□□□ -2.25
PSMC6-209ENST00000555175 CHD8Q9HCK8 2581 aa1□□□□□ -2.25
PSMC6-209ENST00000555175 PKD1L2Q7Z442 2459 aa0.99□□□□□ -2.25
PSMC6-209ENST00000555175 PRUNE2Q8WUY3 3088 aa0.99□□□□□ -2.25
PSMC6-209ENST00000555175 COL6A5A8TX70 2615 aa0.99□□□□□ -2.25
PSMC6-209ENST00000555175 PIEZO1Q92508 2521 aa0.99□□□□□ -2.25
PSMC6-209ENST00000555175 CELSR2Q9HCU4 2923 aa0.99□□□□□ -2.25
PSMC6-209ENST00000555175 HRNRQ86YZ3 2850 aaPredicted RBP0.99□□□□□ -2.25
PSMC6-209ENST00000555175 FRYQ5TBA9 3013 aa0.99□□□□□ -2.25
PSMC6-209ENST00000555175 SRRM2Q9UQ35 2752 aaKnown RBP0.98□□□□□ -2.25
PSMC6-209ENST00000555175 LRRK2Q5S007 2527 aa0.98□□□□□ -2.25
PSMC6-209ENST00000555175 CFAP46Q8IYW2 2715 aa0.98□□□□□ -2.25
PSMC6-209ENST00000555175 OTOGQ6ZRI0 2925 aa0.98□□□□□ -2.25
PSMC6-209ENST00000555175 ACACBO00763 2458 aa0.97□□□□□ -2.25
PSMC6-209ENST00000555175 FRYLO94915 3013 aa0.97□□□□□ -2.25
PSMC6-209ENST00000555175 SRCAPQ6ZRS2 3230 aa0.97□□□□□ -2.25
PSMC6-209ENST00000555175 NF1P21359 2839 aa0.97□□□□□ -2.25
PSMC6-209ENST00000555175 PCNTO95613 3336 aa0.97□□□□□ -2.25
PSMC6-209ENST00000555175 NBEAL2Q6ZNJ1 2754 aa0.97□□□□□ -2.25
PSMC6-209ENST00000555175 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
PSMC6-209ENST00000555175 TTC28Q96AY4 2481 aa0.97□□□□□ -2.25
PSMC6-209ENST00000555175 ACANP16112 2415 aa0.97□□□□□ -2.25
PSMC6-209ENST00000555175 HECTD1Q9ULT8 2610 aa0.97□□□□□ -2.25
PSMC6-209ENST00000555175 TRIOO75962 3097 aa0.97□□□□□ -2.25
PSMC6-209ENST00000555175 EPG5Q9HCE0 2579 aa0.97□□□□□ -2.25
PSMC6-209ENST00000555175 FASNP49327 2511 aaKnown RBP0.96□□□□□ -2.26
PSMC6-209ENST00000555175 USP9YO00507 2555 aaPredicted RBP0.96□□□□□ -2.26
PSMC6-209ENST00000555175 ABCA12Q86UK0 2595 aa0.96□□□□□ -2.26
PSMC6-209ENST00000555175 Q5VSD8 79 aa0.96□□□□□ -2.26
PSMC6-209ENST00000555175 NBEAL1Q6ZS30 2694 aa0.96□□□□□ -2.26
PSMC6-209ENST00000555175 CFAP54Q96N23 3096 aa0.96□□□□□ -2.26
PSMC6-209ENST00000555175 CACNA1AO00555 2505 aa0.95□□□□□ -2.26
PSMC6-209ENST00000555175 COL6A3P12111 3177 aa0.95□□□□□ -2.26
PSMC6-209ENST00000555175 DMBT1Q9UGM3 2413 aaPredicted RBP0.95□□□□□ -2.26
PSMC6-209ENST00000555175 POLQO75417 2590 aa0.95□□□□□ -2.26
PSMC6-209ENST00000555175 SETD2Q9BYW2 2564 aaPredicted RBP0.95□□□□□ -2.26
PSMC6-209ENST00000555175 CENPFP49454 3210 aa0.95□□□□□ -2.26
PSMC6-209ENST00000555175 RANBP2P49792 3224 aaKnown RBP0.95□□□□□ -2.26
PSMC6-209ENST00000555175 TGP01266 2768 aa0.95□□□□□ -2.26
PSMC6-209ENST00000555175 VWFP04275 2813 aa0.94□□□□□ -2.26
PSMC6-209ENST00000555175 ATRQ13535 2644 aa0.94□□□□□ -2.26
PSMC6-209ENST00000555175 GOLGB1Q14789 3259 aaKnown RBP0.94□□□□□ -2.26
PSMC6-209ENST00000555175 MYO18BQ8IUG5 2567 aa0.94□□□□□ -2.26
PSMC6-209ENST00000555175 TENM3Q9P273 2699 aa0.94□□□□□ -2.26
PSMC6-209ENST00000555175 EP400Q96L91 3159 aa0.94□□□□□ -2.26
PSMC6-209ENST00000555175 NIPBLQ6KC79 2804 aaeCLIP0.93□□□□□ -2.26
PSMC6-209ENST00000555175 MEGF8Q7Z7M0 2845 aa0.93□□□□□ -2.26
PSMC6-209ENST00000555175 SPTBN5Q9NRC6 3674 aaKnown RBP0.93□□□□□ -2.26
PSMC6-209ENST00000555175 UTRNP46939 3433 aa0.93□□□□□ -2.26
PSMC6-209ENST00000555175 C9orf92A6NGG3 77 aa0.93□□□□□ -2.26
PSMC6-209ENST00000555175 TNP1P09430 55 aa0.93□□□□□ -2.26
PSMC6-209ENST00000555175 DCHS2Q6V1P9 2916 aa0.93□□□□□ -2.26
PSMC6-209ENST00000555175 C5orf42Q9H799 3197 aa0.93□□□□□ -2.26
PSMC6-209ENST00000555175 CRYBG3Q68DQ2 2970 aa0.93□□□□□ -2.26
PSMC6-209ENST00000555175 ITPR3Q14573 2671 aa0.92□□□□□ -2.26
PSMC6-209ENST00000555175 VPS13AQ96RL7 3174 aa0.92□□□□□ -2.26
PSMC6-209ENST00000555175 BDP1A6H8Y1 2624 aa0.92□□□□□ -2.26
PSMC6-209ENST00000555175 HIVEP1P15822 2718 aa0.92□□□□□ -2.26
PSMC6-209ENST00000555175 MXRA5Q9NR99 2828 aa0.92□□□□□ -2.26
PSMC6-209ENST00000555175 TENM4Q6N022 2769 aa0.92□□□□□ -2.26
PSMC6-209ENST00000555175 DMDP11532 3685 aa0.91□□□□□ -2.26
PSMC6-209ENST00000555175 ITPR2Q14571 2701 aa0.91□□□□□ -2.26
PSMC6-209ENST00000555175 VPS13DQ5THJ4 4388 aa0.91□□□□□ -2.26
PSMC6-209ENST00000555175 DMXL2Q8TDJ6 3036 aa0.91□□□□□ -2.26
PSMC6-209ENST00000555175 CFAP47Q6ZTR5 3102 aa0.91□□□□□ -2.26
PSMC6-209ENST00000555175 USP24Q9UPU5 2620 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 225.4 ms