RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 Q75L30 129 aa8.94□□□□□ -0.98
XRCC3-211ENST00000555055 IGLV7-46A0A075B6I9 117 aa8.94□□□□□ -0.98
XRCC3-211ENST00000555055 PLAC8Q9NZF1 115 aa8.94□□□□□ -0.98
XRCC3-211ENST00000555055 PKHD1P08F94 4074 aa8.94□□□□□ -0.98
XRCC3-211ENST00000555055 CHKB-CPT1BH3BT56 60 aa8.91□□□□□ -0.98
XRCC3-211ENST00000555055 WWC2-AS2Q96NR7 200 aa8.91□□□□□ -0.98
XRCC3-211ENST00000555055 MOBPQ13875 183 aa8.91□□□□□ -0.98
XRCC3-211ENST00000555055 KTN1-AS1Q86SY8 53 aa8.91□□□□□ -0.98
XRCC3-211ENST00000555055 MMP24-AS1A0A0U1RRL7 71 aa8.9□□□□□ -0.98
XRCC3-211ENST00000555055 CIRBP-AS1Q8TBR5 109 aa8.9□□□□□ -0.98
XRCC3-211ENST00000555055 PRR15LQ9BU68 103 aa8.9□□□□□ -0.99
XRCC3-211ENST00000555055 ASB16-AS1Q495Z4 193 aa8.89□□□□□ -0.99
XRCC3-211ENST00000555055 TP53AIP1Q9HCN2 124 aa8.89□□□□□ -0.99
XRCC3-211ENST00000555055 COA5Q86WW8 74 aa8.89□□□□□ -0.99
XRCC3-211ENST00000555055 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
XRCC3-211ENST00000555055 ATP11AUNQ6ZP68 121 aa8.88□□□□□ -0.99
XRCC3-211ENST00000555055 ZNF861PO60384 105 aa8.88□□□□□ -0.99
XRCC3-211ENST00000555055 SACSQ9NZJ4 4579 aa8.87□□□□□ -0.99
XRCC3-211ENST00000555055 VPS13BQ7Z7G8 4022 aa8.86□□□□□ -0.99
XRCC3-211ENST00000555055 SPTSSBQ8NFR3 76 aa8.86□□□□□ -0.99
XRCC3-211ENST00000555055 KRTAP10-1P60331 282 aa8.85□□□□□ -0.99
XRCC3-211ENST00000555055 LINC01558Q9Y6Z2 57 aa8.83□□□□□ -1
XRCC3-211ENST00000555055 IGLV7-43P04211 117 aa8.82□□□□□ -1
XRCC3-211ENST00000555055 LINC00483Q53H64 154 aa8.82□□□□□ -1
XRCC3-211ENST00000555055 LCA10Q71F78 164 aa8.81□□□□□ -1
XRCC3-211ENST00000555055 CDC42SE1Q9NRR8 79 aa8.81□□□□□ -1
XRCC3-211ENST00000555055 NDUFS5O43920 106 aa8.8□□□□□ -1
XRCC3-211ENST00000555055 A6NED7 52 aa8.79□□□□□ -1
XRCC3-211ENST00000555055 Q96NJ1 140 aa8.79□□□□□ -1
XRCC3-211ENST00000555055 ZNF706Q9Y5V0 76 aaPredicted RBP8.78□□□□□ -1
XRCC3-211ENST00000555055 A6NN06 94 aa8.77□□□□□ -1.01
XRCC3-211ENST00000555055 SPINK6Q6UWN8 80 aa8.76□□□□□ -1.01
XRCC3-211ENST00000555055 C8orf17Q9NRJ1 99 aa8.76□□□□□ -1.01
XRCC3-211ENST00000555055 KMT2CQ8NEZ4 4911 aaKnown RBP8.75□□□□□ -1.01
XRCC3-211ENST00000555055 A0A087X002 238 aa8.73□□□□□ -1.01
XRCC3-211ENST00000555055 IGHV6-1A0A0B4J1U7 121 aa8.73□□□□□ -1.01
XRCC3-211ENST00000555055 NOTCH2NLQ7Z3S9 236 aa8.72□□□□□ -1.01
XRCC3-211ENST00000555055 PCOTHQ58A44 107 aa8.72□□□□□ -1.01
XRCC3-211ENST00000555055 A0A1B0GVX0 72 aa8.71□□□□□ -1.02
XRCC3-211ENST00000555055 Q6ZSA8 131 aa8.69□□□□□ -1.02
XRCC3-211ENST00000555055 DYNC1H1Q14204 4646 aaKnown RBP8.69□□□□□ -1.02
XRCC3-211ENST00000555055 FAT1Q14517 4588 aa8.69□□□□□ -1.02
XRCC3-211ENST00000555055 KRTAP21-3Q3LHN1 58 aa8.69□□□□□ -1.02
XRCC3-211ENST00000555055 HRES1P13985 223 aa8.68□□□□□ -1.02
XRCC3-211ENST00000555055 MRPL34Q9BQ48 92 aaKnown RBP8.68□□□□□ -1.02
XRCC3-211ENST00000555055 SPAG11AQ6PDA7 123 aa8.67□□□□□ -1.02
XRCC3-211ENST00000555055 C7orf65Q6ZTY9 151 aa8.67□□□□□ -1.02
XRCC3-211ENST00000555055 KRTAP13-2Q52LG2 175 aa8.66□□□□□ -1.02
XRCC3-211ENST00000555055 SMR3BP02814 79 aaPredicted RBP8.64□□□□□ -1.03
XRCC3-211ENST00000555055 CDK2AP2O75956 126 aa8.63□□□□□ -1.03
XRCC3-211ENST00000555055 RYR2Q92736 4967 aa8.61□□□□□ -1.03
XRCC3-211ENST00000555055 SPINK7P58062 85 aa8.59□□□□□ -1.03
XRCC3-211ENST00000555055 C4orf48Q5BLP8 95 aa8.59□□□□□ -1.03
XRCC3-211ENST00000555055 KRTAP13-3Q3SY46 172 aa8.58□□□□□ -1.04
XRCC3-211ENST00000555055 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
XRCC3-211ENST00000555055 C8orf87E5RJ46 101 aa8.55□□□□□ -1.04
XRCC3-211ENST00000555055 APOBP04114 4563 aaKnown RBP8.55□□□□□ -1.04
XRCC3-211ENST00000555055 PLA2G1BP04054 148 aaKnown RBP8.54□□□□□ -1.04
XRCC3-211ENST00000555055 SSBP3-AS1Q7Z2R9 100 aa8.54□□□□□ -1.04
XRCC3-211ENST00000555055 ACYP2P14621 99 aa8.53□□□□□ -1.04
XRCC3-211ENST00000555055 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.05
XRCC3-211ENST00000555055 DMAC1Q96GE9 116 aa8.49□□□□□ -1.05
XRCC3-211ENST00000555055 Q5W150 140 aa8.48□□□□□ -1.05
XRCC3-211ENST00000555055 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
XRCC3-211ENST00000555055 RYR3Q15413 4870 aa8.48□□□□□ -1.05
XRCC3-211ENST00000555055 LINC00313P59037 77 aa8.46□□□□□ -1.06
XRCC3-211ENST00000555055 TYMSOSQ8TAI1 123 aa8.46□□□□□ -1.06
XRCC3-211ENST00000555055 A0A1B0GVY2 172 aa8.43□□□□□ -1.06
XRCC3-211ENST00000555055 PRAC1Q96KF2 57 aa8.43□□□□□ -1.06
XRCC3-211ENST00000555055 FAM229AH3BQW9 127 aa8.4□□□□□ -1.07
XRCC3-211ENST00000555055 SPATA8Q6RVD6 105 aa8.39□□□□□ -1.07
XRCC3-211ENST00000555055 LRP1Q07954 4544 aaKnown RBP8.39□□□□□ -1.07
XRCC3-211ENST00000555055 A0A1B0GU69 56 aa8.36□□□□□ -1.07
XRCC3-211ENST00000555055 ADM2Q7Z4H4 148 aa8.35□□□□□ -1.07
XRCC3-211ENST00000555055 IGKV2-30P06310 120 aa8.35□□□□□ -1.07
XRCC3-211ENST00000555055 LINC01554Q52M75 96 aa8.35□□□□□ -1.07
XRCC3-211ENST00000555055 H3BS24 57 aa8.34□□□□□ -1.07
XRCC3-211ENST00000555055 PKHD1L1Q86WI1 4243 aa8.32□□□□□ -1.08
XRCC3-211ENST00000555055 KRTAP10-4P60372 401 aaPredicted RBP8.32□□□□□ -1.08
XRCC3-211ENST00000555055 LINC00304Q8N9R0 145 aa8.32□□□□□ -1.08
XRCC3-211ENST00000555055 KRTAP16-1A8MUX0 517 aa8.3□□□□□ -1.08
XRCC3-211ENST00000555055 UQCR11O14957 56 aa8.29□□□□□ -1.08
XRCC3-211ENST00000555055 FLG2Q5D862 2391 aaPredicted RBP8.29□□□□□ -1.08
XRCC3-211ENST00000555055 SPINK1P00995 79 aa8.28□□□□□ -1.08
XRCC3-211ENST00000555055 HSPG2P98160 4391 aa8.27□□□□□ -1.09
XRCC3-211ENST00000555055 MIR22HGQ0VDD5 57 aa8.27□□□□□ -1.09
XRCC3-211ENST00000555055 KIAA1109Q2LD37 5005 aa8.25□□□□□ -1.09
XRCC3-211ENST00000555055 C9orf92A6NGG3 77 aa8.25□□□□□ -1.09
XRCC3-211ENST00000555055 IGKV2D-30A0A075B6S6 120 aa8.23□□□□□ -1.09
XRCC3-211ENST00000555055 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
XRCC3-211ENST00000555055 DMBT1Q9UGM3 2413 aaPredicted RBP8.2□□□□□ -1.1
XRCC3-211ENST00000555055 EPPK1P58107 5090 aaKnown RBP8.19□□□□□ -1.1
XRCC3-211ENST00000555055 RYR1P21817 5038 aa8.18□□□□□ -1.1
XRCC3-211ENST00000555055 KRTAP17-1Q9BYP8 105 aa8.18□□□□□ -1.1
XRCC3-211ENST00000555055 TNXBP22105 4242 aa8.16□□□□□ -1.1
XRCC3-211ENST00000555055 Q5VSD8 79 aa8.12□□□□□ -1.11
XRCC3-211ENST00000555055 FAT3Q8TDW7 4589 aa8.11□□□□□ -1.11
XRCC3-211ENST00000555055 CSAG1Q6PB30 78 aa8.11□□□□□ -1.11
XRCC3-211ENST00000555055 Q8N1X5 172 aa8.11□□□□□ -1.11
XRCC3-211ENST00000555055 RPS29P62273 56 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms