RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 A0A087WSZ3 146 aa5.91□□□□□ -1.46
SHMT2-215ENST00000554656 SCGB1A1P11684 91 aa5.91□□□□□ -1.46
SHMT2-215ENST00000554656 A0A0G2JQZ4 141 aa5.9□□□□□ -1.46
SHMT2-215ENST00000554656 C4orf48Q5BLP8 95 aa5.9□□□□□ -1.46
SHMT2-215ENST00000554656 SPINK1P00995 79 aa5.89□□□□□ -1.47
SHMT2-215ENST00000554656 IGKV3D-7A0A0C4DH55 119 aa5.88□□□□□ -1.47
SHMT2-215ENST00000554656 BPY2O14599 106 aa5.88□□□□□ -1.47
SHMT2-215ENST00000554656 Q5XG85 94 aa5.88□□□□□ -1.47
SHMT2-215ENST00000554656 J3KT08 172 aa5.86□□□□□ -1.47
SHMT2-215ENST00000554656 RPS29P62273 56 aaKnown RBP5.86□□□□□ -1.47
SHMT2-215ENST00000554656 LINC00472Q9H8W2 130 aa5.86□□□□□ -1.47
SHMT2-215ENST00000554656 SEC61BP60468 96 aaKnown RBP5.84□□□□□ -1.47
SHMT2-215ENST00000554656 XP32Q5T750 250 aa5.84□□□□□ -1.47
SHMT2-215ENST00000554656 LIMD2Q9BT23 127 aa5.84□□□□□ -1.47
SHMT2-215ENST00000554656 LCE2CQ5TA81 110 aa5.83□□□□□ -1.48
SHMT2-215ENST00000554656 DSCR10P59022 87 aa5.82□□□□□ -1.48
SHMT2-215ENST00000554656 HIST1H4AP62805 103 aaKnown RBP5.82□□□□□ -1.48
SHMT2-215ENST00000554656 KRTAP19-2Q3LHN2 52 aa5.82□□□□□ -1.48
SHMT2-215ENST00000554656 LCE2DQ5TA82 110 aaPredicted RBP5.82□□□□□ -1.48
SHMT2-215ENST00000554656 HRCT1Q6UXD1 115 aa5.82□□□□□ -1.48
SHMT2-215ENST00000554656 IGKV4-1P06312 121 aa5.81□□□□□ -1.48
SHMT2-215ENST00000554656 Q96NJ1 140 aa5.81□□□□□ -1.48
SHMT2-215ENST00000554656 FAM236AA0A1B0GUQ0 79 aa5.79□□□□□ -1.48
SHMT2-215ENST00000554656 FAM236BA0A1B0GV22 79 aa5.79□□□□□ -1.48
SHMT2-215ENST00000554656 A8MWP4 228 aa5.79□□□□□ -1.48
SHMT2-215ENST00000554656 NDUFB1O75438 58 aa5.79□□□□□ -1.48
SHMT2-215ENST00000554656 A0A087WVE0 104 aa5.77□□□□□ -1.49
SHMT2-215ENST00000554656 K7EQZ3 153 aa5.77□□□□□ -1.49
SHMT2-215ENST00000554656 PRR15Q8IV56 129 aa5.77□□□□□ -1.49
SHMT2-215ENST00000554656 ATOX1O00244 68 aa5.76□□□□□ -1.49
SHMT2-215ENST00000554656 DEFB116Q30KQ4 102 aa5.75□□□□□ -1.49
SHMT2-215ENST00000554656 SMIM20Q8N5G0 67 aa5.75□□□□□ -1.49
SHMT2-215ENST00000554656 Q8N9L7 120 aa5.75□□□□□ -1.49
SHMT2-215ENST00000554656 MT1HP80294 61 aa5.74□□□□□ -1.49
SHMT2-215ENST00000554656 C1orf195Q5TG92 126 aa5.74□□□□□ -1.49
SHMT2-215ENST00000554656 A0A1B0GVX0 72 aa5.73□□□□□ -1.49
SHMT2-215ENST00000554656 HCG22E2RYF7 251 aa5.73□□□□□ -1.49
SHMT2-215ENST00000554656 PCOTHQ58A44 107 aa5.73□□□□□ -1.49
SHMT2-215ENST00000554656 CRCT1Q9UGL9 99 aa5.73□□□□□ -1.49
SHMT2-215ENST00000554656 C9orf92A6NGG3 77 aa5.72□□□□□ -1.49
SHMT2-215ENST00000554656 C8orf87E5RJ46 101 aa5.71□□□□□ -1.5
SHMT2-215ENST00000554656 ANAPC13Q9BS18 74 aa5.71□□□□□ -1.5
SHMT2-215ENST00000554656 C8orf17Q9NRJ1 99 aa5.7□□□□□ -1.5
SHMT2-215ENST00000554656 MMP24-AS1A0A0U1RRL7 71 aa5.69□□□□□ -1.5
SHMT2-215ENST00000554656 PCP4P48539 62 aa5.69□□□□□ -1.5
SHMT2-215ENST00000554656 CASC2Q6XLA1 102 aa5.68□□□□□ -1.5
SHMT2-215ENST00000554656 TRAV7A0A075B6U4 112 aa5.67□□□□□ -1.5
SHMT2-215ENST00000554656 IGHV6-1A0A0B4J1U7 121 aa5.67□□□□□ -1.5
SHMT2-215ENST00000554656 SERP2Q8N6R1 65 aa5.67□□□□□ -1.5
SHMT2-215ENST00000554656 TMEM254Q8TBM7 123 aa5.67□□□□□ -1.5
SHMT2-215ENST00000554656 hDV103S1A0JD37 113 aa5.66□□□□□ -1.5
SHMT2-215ENST00000554656 LORP23490 312 aaPredicted RBP5.66□□□□□ -1.5
SHMT2-215ENST00000554656 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
SHMT2-215ENST00000554656 COX7CP15954 63 aa5.65□□□□□ -1.5
SHMT2-215ENST00000554656 KRTAP10-6P60371 365 aaPredicted RBP5.65□□□□□ -1.5
SHMT2-215ENST00000554656 WFDC13Q8IUB5 93 aa5.65□□□□□ -1.5
SHMT2-215ENST00000554656 OCR1Q9BZK8 76 aa5.65□□□□□ -1.5
SHMT2-215ENST00000554656 UQCRQO14949 82 aa5.64□□□□□ -1.51
SHMT2-215ENST00000554656 LINC00313P59037 77 aa5.64□□□□□ -1.51
SHMT2-215ENST00000554656 MRPL34Q9BQ48 92 aaKnown RBP5.63□□□□□ -1.51
SHMT2-215ENST00000554656 FLGP20930 4061 aaPredicted RBP5.62□□□□□ -1.51
SHMT2-215ENST00000554656 TP53AIP1Q9HCN2 124 aa5.62□□□□□ -1.51
SHMT2-215ENST00000554656 RPL37P61927 97 aaKnown RBP5.61□□□□□ -1.51
SHMT2-215ENST00000554656 NOTCH2NLQ7Z3S9 236 aa5.6□□□□□ -1.51
SHMT2-215ENST00000554656 KRTAP16-1A8MUX0 517 aa5.58□□□□□ -1.52
SHMT2-215ENST00000554656 C5orf47Q569G3 176 aa5.58□□□□□ -1.52
SHMT2-215ENST00000554656 Q8N9P0 234 aaPredicted RBP5.58□□□□□ -1.52
SHMT2-215ENST00000554656 H3BPC8 53 aa5.56□□□□□ -1.52
SHMT2-215ENST00000554656 CCDC179H3BU77 68 aa5.55□□□□□ -1.52
SHMT2-215ENST00000554656 KLKP1Q107X0 134 aa5.55□□□□□ -1.52
SHMT2-215ENST00000554656 M0R2T5 61 aa5.54□□□□□ -1.52
SHMT2-215ENST00000554656 MP68P56378 58 aa5.54□□□□□ -1.52
SHMT2-215ENST00000554656 TRAV22A0A0B4J277 110 aa5.53□□□□□ -1.52
SHMT2-215ENST00000554656 NDUFS5O43920 106 aa5.53□□□□□ -1.52
SHMT2-215ENST00000554656 COX6B2Q6YFQ2 88 aa5.53□□□□□ -1.52
SHMT2-215ENST00000554656 C20orf197Q8N268 126 aa5.52□□□□□ -1.53
SHMT2-215ENST00000554656 A8MUU9 505 aa5.51□□□□□ -1.53
SHMT2-215ENST00000554656 H0Y9P7 68 aa5.51□□□□□ -1.53
SHMT2-215ENST00000554656 C20orf166-AS1Q96NR2 134 aa5.51□□□□□ -1.53
SHMT2-215ENST00000554656 NDUFC1O43677 76 aa5.5□□□□□ -1.53
SHMT2-215ENST00000554656 ZCCHC13Q8WW36 166 aaKnown RBP5.49□□□□□ -1.53
SHMT2-215ENST00000554656 Q75L30 129 aa5.47□□□□□ -1.53
SHMT2-215ENST00000554656 LOC101927531A0A1B0GV80 90 aa5.46□□□□□ -1.54
SHMT2-215ENST00000554656 LINC00208Q96KT6 92 aa5.46□□□□□ -1.54
SHMT2-215ENST00000554656 Q5W150 140 aa5.45□□□□□ -1.54
SHMT2-215ENST00000554656 C1orf64Q8NEQ6 169 aa5.45□□□□□ -1.54
SHMT2-215ENST00000554656 SNURFQ9Y675 71 aa5.45□□□□□ -1.54
SHMT2-215ENST00000554656 H7BZZ5 65 aa5.43□□□□□ -1.54
SHMT2-215ENST00000554656 TMEM258P61165 79 aa5.43□□□□□ -1.54
SHMT2-215ENST00000554656 ATP11AUNQ6ZP68 121 aa5.42□□□□□ -1.54
SHMT2-215ENST00000554656 KRTAP9-8Q9BYQ0 159 aa5.42□□□□□ -1.54
SHMT2-215ENST00000554656 CYSTM1Q9H1C7 97 aa5.41□□□□□ -1.54
SHMT2-215ENST00000554656 IGKV2-30P06310 120 aa5.4□□□□□ -1.54
SHMT2-215ENST00000554656 ATP5EP56381 51 aaPredicted RBP5.4□□□□□ -1.54
SHMT2-215ENST00000554656 SPANXA2-OT1Q8N9U9 137 aa5.38□□□□□ -1.55
SHMT2-215ENST00000554656 CYP4F30PQ9H0H9 118 aa5.38□□□□□ -1.55
SHMT2-215ENST00000554656 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.37□□□□□ -1.55
SHMT2-215ENST00000554656 KRTAP9-7A8MTY7 169 aa5.36□□□□□ -1.55
SHMT2-215ENST00000554656 C7orf65Q6ZTY9 151 aa5.36□□□□□ -1.55
SHMT2-215ENST00000554656 FAM236DA0A1B0GTK5 79 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms