RNA–Protein interactions for RNA: ENST00000553020.5

CNOT2-242, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-242ENST00000553020 Q6ZSA8 131 aa6.15□□□□□ -1.42
CNOT2-242ENST00000553020 A0A0U1RQV1 116 aa6.14□□□□□ -1.43
CNOT2-242ENST00000553020 H3BPC8 53 aa6.14□□□□□ -1.43
CNOT2-242ENST00000553020 H7BZZ5 65 aa6.14□□□□□ -1.43
CNOT2-242ENST00000553020 PKD1P98161 4303 aa6.13□□□□□ -1.43
CNOT2-242ENST00000553020 CYSTM1Q9H1C7 97 aa6.13□□□□□ -1.43
CNOT2-242ENST00000553020 hDV103S1A0JD37 113 aa6.12□□□□□ -1.43
CNOT2-242ENST00000553020 KRTAP10-1P60331 282 aa6.12□□□□□ -1.43
CNOT2-242ENST00000553020 FAM229BQ4G0N7 80 aa6.12□□□□□ -1.43
CNOT2-242ENST00000553020 SERP1Q9Y6X1 66 aa6.12□□□□□ -1.43
CNOT2-242ENST00000553020 LIMD2Q9BT23 127 aa6.11□□□□□ -1.43
CNOT2-242ENST00000553020 TP53AIP1Q9HCN2 124 aa6.11□□□□□ -1.43
CNOT2-242ENST00000553020 A0A1B0GVX0 72 aa6.1□□□□□ -1.43
CNOT2-242ENST00000553020 J3QL48 77 aa6.1□□□□□ -1.43
CNOT2-242ENST00000553020 ANAPC11Q9NYG5 84 aa6.1□□□□□ -1.43
CNOT2-242ENST00000553020 DNAH6Q9C0G6 4158 aa6.1□□□□□ -1.43
CNOT2-242ENST00000553020 DNAH17Q9UFH2 4485 aa6.09□□□□□ -1.43
CNOT2-242ENST00000553020 MMP24-AS1A0A0U1RRL7 71 aa6.09□□□□□ -1.43
CNOT2-242ENST00000553020 KRTAP29-1A8MX34 341 aaPredicted RBP6.09□□□□□ -1.43
CNOT2-242ENST00000553020 C8orf17Q9NRJ1 99 aa6.09□□□□□ -1.43
CNOT2-242ENST00000553020 IGHV6-1A0A0B4J1U7 121 aa6.08□□□□□ -1.44
CNOT2-242ENST00000553020 C8orf87E5RJ46 101 aa6.08□□□□□ -1.44
CNOT2-242ENST00000553020 H0Y9P7 68 aa6.08□□□□□ -1.44
CNOT2-242ENST00000553020 C4orf48Q5BLP8 95 aa6.08□□□□□ -1.44
CNOT2-242ENST00000553020 FAT4Q6V0I7 4981 aa6.08□□□□□ -1.44
CNOT2-242ENST00000553020 NDUFS5O43920 106 aa6.07□□□□□ -1.44
CNOT2-242ENST00000553020 TRAV22A0A0B4J277 110 aa6.06□□□□□ -1.44
CNOT2-242ENST00000553020 ASB16-AS1Q495Z4 193 aa6.06□□□□□ -1.44
CNOT2-242ENST00000553020 SPINK6Q6UWN8 80 aa6.06□□□□□ -1.44
CNOT2-242ENST00000553020 Q96NJ1 140 aa6.06□□□□□ -1.44
CNOT2-242ENST00000553020 LINC00208Q96KT6 92 aa6.04□□□□□ -1.44
CNOT2-242ENST00000553020 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
CNOT2-242ENST00000553020 TYMSOSQ8TAI1 123 aa6.02□□□□□ -1.45
CNOT2-242ENST00000553020 LRP1BQ9NZR2 4599 aa6.02□□□□□ -1.45
CNOT2-242ENST00000553020 Q5XG85 94 aa6.01□□□□□ -1.45
CNOT2-242ENST00000553020 ZCCHC13Q8WW36 166 aaKnown RBP6.01□□□□□ -1.45
CNOT2-242ENST00000553020 C1orf64Q8NEQ6 169 aa6□□□□□ -1.45
CNOT2-242ENST00000553020 SMIM26A0A096LP01 95 aa5.99□□□□□ -1.45
CNOT2-242ENST00000553020 PLA2G1BP04054 148 aaKnown RBP5.99□□□□□ -1.45
CNOT2-242ENST00000553020 A0A087X002 238 aa5.98□□□□□ -1.45
CNOT2-242ENST00000553020 SPINK1P00995 79 aa5.97□□□□□ -1.45
CNOT2-242ENST00000553020 KRTAP13-2Q52LG2 175 aa5.97□□□□□ -1.45
CNOT2-242ENST00000553020 SPAG11AQ6PDA7 123 aa5.97□□□□□ -1.45
CNOT2-242ENST00000553020 SPANXA2-OT1Q8N9U9 137 aa5.97□□□□□ -1.45
CNOT2-242ENST00000553020 LINC00313P59037 77 aa5.96□□□□□ -1.46
CNOT2-242ENST00000553020 CYP4F30PQ9H0H9 118 aa5.96□□□□□ -1.46
CNOT2-242ENST00000553020 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.46
CNOT2-242ENST00000553020 LOC101927531A0A1B0GV80 90 aa5.95□□□□□ -1.46
CNOT2-242ENST00000553020 KRTAP1-4P0C5Y4 121 aa5.94□□□□□ -1.46
CNOT2-242ENST00000553020 RPS29P62273 56 aaKnown RBP5.94□□□□□ -1.46
CNOT2-242ENST00000553020 FAT1Q14517 4588 aa5.94□□□□□ -1.46
CNOT2-242ENST00000553020 DNAH5Q8TE73 4624 aa5.94□□□□□ -1.46
CNOT2-242ENST00000553020 VPS13BQ7Z7G8 4022 aa5.93□□□□□ -1.46
CNOT2-242ENST00000553020 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
CNOT2-242ENST00000553020 FSIP2Q5CZC0 6907 aa5.92□□□□□ -1.46
CNOT2-242ENST00000553020 FAM229AH3BQW9 127 aa5.92□□□□□ -1.46
CNOT2-242ENST00000553020 C1orf195Q5TG92 126 aa5.92□□□□□ -1.46
CNOT2-242ENST00000553020 LRP2P98164 4655 aa5.92□□□□□ -1.46
CNOT2-242ENST00000553020 OXTP01178 125 aa5.91□□□□□ -1.46
CNOT2-242ENST00000553020 SMR3BP02814 79 aaPredicted RBP5.88□□□□□ -1.47
CNOT2-242ENST00000553020 PRR4Q16378 134 aa5.88□□□□□ -1.47
CNOT2-242ENST00000553020 PCOTHQ58A44 107 aa5.88□□□□□ -1.47
CNOT2-242ENST00000553020 V9GYY9 64 aa5.88□□□□□ -1.47
CNOT2-242ENST00000553020 IGLV7-46A0A075B6I9 117 aa5.86□□□□□ -1.47
CNOT2-242ENST00000553020 LCE2BO14633 110 aa5.86□□□□□ -1.47
CNOT2-242ENST00000553020 Q5VSD8 79 aa5.86□□□□□ -1.47
CNOT2-242ENST00000553020 PRR26Q8N8Z3 221 aa5.86□□□□□ -1.47
CNOT2-242ENST00000553020 NOTCH2NLQ7Z3S9 236 aa5.85□□□□□ -1.47
CNOT2-242ENST00000553020 KRTAP9-7A8MTY7 169 aa5.84□□□□□ -1.47
CNOT2-242ENST00000553020 Q8N9P0 234 aaPredicted RBP5.84□□□□□ -1.47
CNOT2-242ENST00000553020 MPLKIPQ8TAP9 179 aa5.83□□□□□ -1.48
CNOT2-242ENST00000553020 PKHD1L1Q86WI1 4243 aa5.81□□□□□ -1.48
CNOT2-242ENST00000553020 FP248Q71RG6 208 aaPredicted RBP5.8□□□□□ -1.48
CNOT2-242ENST00000553020 C4orf26Q17RF5 130 aa5.79□□□□□ -1.48
CNOT2-242ENST00000553020 Q5W150 140 aa5.79□□□□□ -1.48
CNOT2-242ENST00000553020 COA5Q86WW8 74 aa5.79□□□□□ -1.48
CNOT2-242ENST00000553020 DNAH8Q96JB1 4490 aa5.79□□□□□ -1.48
CNOT2-242ENST00000553020 IGKV2-30P06310 120 aa5.77□□□□□ -1.49
CNOT2-242ENST00000553020 Q1T7F1 81 aa5.77□□□□□ -1.49
CNOT2-242ENST00000553020 KRTAP16-1A8MUX0 517 aa5.76□□□□□ -1.49
CNOT2-242ENST00000553020 CHKB-CPT1BH3BT56 60 aa5.76□□□□□ -1.49
CNOT2-242ENST00000553020 ACYP2P14621 99 aa5.76□□□□□ -1.49
CNOT2-242ENST00000553020 RETNLBQ9BQ08 111 aa5.76□□□□□ -1.49
CNOT2-242ENST00000553020 KRTAP13-3Q3SY46 172 aa5.75□□□□□ -1.49
CNOT2-242ENST00000553020 C7orf65Q6ZTY9 151 aa5.74□□□□□ -1.49
CNOT2-242ENST00000553020 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
CNOT2-242ENST00000553020 KRTAP10-4P60372 401 aaPredicted RBP5.73□□□□□ -1.49
CNOT2-242ENST00000553020 HRES1P13985 223 aa5.71□□□□□ -1.5
CNOT2-242ENST00000553020 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
CNOT2-242ENST00000553020 DMAC1Q96GE9 116 aa5.69□□□□□ -1.5
CNOT2-242ENST00000553020 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
CNOT2-242ENST00000553020 BRK1Q8WUW1 75 aa5.67□□□□□ -1.5
CNOT2-242ENST00000553020 C9orf92A6NGG3 77 aa5.66□□□□□ -1.5
CNOT2-242ENST00000553020 PSPHP1O15172 72 aa5.66□□□□□ -1.5
CNOT2-242ENST00000553020 C20orf166-AS1Q96NR2 134 aa5.66□□□□□ -1.5
CNOT2-242ENST00000553020 PRR15LQ9BU68 103 aa5.66□□□□□ -1.5
CNOT2-242ENST00000553020 A8MUN3 132 aa5.65□□□□□ -1.5
CNOT2-242ENST00000553020 PRO0628Q9UI54 55 aa5.65□□□□□ -1.5
CNOT2-242ENST00000553020 A8MUU9 505 aa5.64□□□□□ -1.51
CNOT2-242ENST00000553020 LCE2AQ5TA79 106 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms