RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 PANO1I0J062 215 aa2.95□□□□□ -1.94
LIMA1-214ENST00000552783 LY6G6CO95867 125 aa2.95□□□□□ -1.94
LIMA1-214ENST00000552783 NOTCH2NLQ7Z3S9 236 aa2.95□□□□□ -1.94
LIMA1-214ENST00000552783 IGHV6-1A0A0B4J1U7 121 aa2.95□□□□□ -1.94
LIMA1-214ENST00000552783 Q96NJ1 140 aa2.95□□□□□ -1.94
LIMA1-214ENST00000552783 MOBPQ13875 183 aa2.95□□□□□ -1.94
LIMA1-214ENST00000552783 NUPR2A6NF83 97 aa2.94□□□□□ -1.94
LIMA1-214ENST00000552783 HRES1P13985 223 aa2.94□□□□□ -1.94
LIMA1-214ENST00000552783 APLNQ9ULZ1 77 aa2.94□□□□□ -1.94
LIMA1-214ENST00000552783 HECTD4Q9Y4D8 3996 aa2.94□□□□□ -1.94
LIMA1-214ENST00000552783 DNAH17Q9UFH2 4485 aa2.93□□□□□ -1.94
LIMA1-214ENST00000552783 ATP11AUNQ6ZP68 121 aa2.93□□□□□ -1.94
LIMA1-214ENST00000552783 CIRBP-AS1Q8TBR5 109 aa2.93□□□□□ -1.94
LIMA1-214ENST00000552783 PLAC8Q9NZF1 115 aa2.93□□□□□ -1.94
LIMA1-214ENST00000552783 ALMS1Q8TCU4 4167 aa2.93□□□□□ -1.94
LIMA1-214ENST00000552783 H3BPC8 53 aa2.93□□□□□ -1.94
LIMA1-214ENST00000552783 KMT2AQ03164 3969 aa2.93□□□□□ -1.94
LIMA1-214ENST00000552783 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.93□□□□□ -1.94
LIMA1-214ENST00000552783 PRR26Q8N8Z3 221 aa2.92□□□□□ -1.94
LIMA1-214ENST00000552783 CDC42SE1Q9NRR8 79 aa2.92□□□□□ -1.94
LIMA1-214ENST00000552783 IGLV5-52A0A0A0MRZ9 124 aa2.92□□□□□ -1.94
LIMA1-214ENST00000552783 ASB16-AS1Q495Z4 193 aa2.92□□□□□ -1.94
LIMA1-214ENST00000552783 SPRR1BP22528 89 aa2.92□□□□□ -1.94
LIMA1-214ENST00000552783 RETNLBQ9BQ08 111 aa2.92□□□□□ -1.94
LIMA1-214ENST00000552783 MEGF8Q7Z7M0 2845 aa2.91□□□□□ -1.94
LIMA1-214ENST00000552783 RTL8CO15255 209 aa2.91□□□□□ -1.94
LIMA1-214ENST00000552783 ADM2Q7Z4H4 148 aa2.91□□□□□ -1.94
LIMA1-214ENST00000552783 LINC01558Q9Y6Z2 57 aa2.91□□□□□ -1.94
LIMA1-214ENST00000552783 Q5W150 140 aa2.91□□□□□ -1.94
LIMA1-214ENST00000552783 PRAC1Q96KF2 57 aa2.91□□□□□ -1.94
LIMA1-214ENST00000552783 C8orf17Q9NRJ1 99 aa2.91□□□□□ -1.94
LIMA1-214ENST00000552783 STARD9Q9P2P6 4700 aa2.9□□□□□ -1.94
LIMA1-214ENST00000552783 VPS13DQ5THJ4 4388 aa2.9□□□□□ -1.94
LIMA1-214ENST00000552783 FBN3Q75N90 2809 aa2.9□□□□□ -1.94
LIMA1-214ENST00000552783 DNAH2Q9P225 4427 aa2.9□□□□□ -1.95
LIMA1-214ENST00000552783 DNAH6Q9C0G6 4158 aa2.9□□□□□ -1.95
LIMA1-214ENST00000552783 Q6ZR54 194 aa2.9□□□□□ -1.95
LIMA1-214ENST00000552783 KRTAP13-1Q8IUC0 172 aa2.9□□□□□ -1.95
LIMA1-214ENST00000552783 PSORS1C2Q9UIG4 136 aa2.89□□□□□ -1.95
LIMA1-214ENST00000552783 A0A087WTM6 91 aa2.89□□□□□ -1.95
LIMA1-214ENST00000552783 C1orf134Q5TEV5 83 aa2.89□□□□□ -1.95
LIMA1-214ENST00000552783 DYNC2H1Q8NCM8 4307 aaKnown RBP2.88□□□□□ -1.95
LIMA1-214ENST00000552783 C7orf65Q6ZTY9 151 aa2.88□□□□□ -1.95
LIMA1-214ENST00000552783 ZNF706Q9Y5V0 76 aaPredicted RBP2.88□□□□□ -1.95
LIMA1-214ENST00000552783 A0A1B0GVX0 72 aa2.87□□□□□ -1.95
LIMA1-214ENST00000552783 H3BS24 57 aa2.87□□□□□ -1.95
LIMA1-214ENST00000552783 LINC00313P59037 77 aa2.87□□□□□ -1.95
LIMA1-214ENST00000552783 MRPL34Q9BQ48 92 aaKnown RBP2.86□□□□□ -1.95
LIMA1-214ENST00000552783 TP53AIP1Q9HCN2 124 aa2.86□□□□□ -1.95
LIMA1-214ENST00000552783 KRTAP13-3Q3SY46 172 aa2.86□□□□□ -1.95
LIMA1-214ENST00000552783 SPACA4Q8TDM5 124 aa2.86□□□□□ -1.95
LIMA1-214ENST00000552783 WWC2-AS2Q96NR7 200 aa2.86□□□□□ -1.95
LIMA1-214ENST00000552783 DNAH11Q96DT5 4516 aa2.86□□□□□ -1.95
LIMA1-214ENST00000552783 FAM229AH3BQW9 127 aa2.85□□□□□ -1.95
LIMA1-214ENST00000552783 ZNF861PO60384 105 aa2.85□□□□□ -1.95
LIMA1-214ENST00000552783 PRKDCP78527 4128 aaKnown RBP2.85□□□□□ -1.95
LIMA1-214ENST00000552783 C8orf87E5RJ46 101 aa2.83□□□□□ -1.96
LIMA1-214ENST00000552783 LINC00483Q53H64 154 aa2.83□□□□□ -1.96
LIMA1-214ENST00000552783 Q6ZRN7 208 aaPredicted RBP2.83□□□□□ -1.96
LIMA1-214ENST00000552783 DMBT1Q9UGM3 2413 aaPredicted RBP2.83□□□□□ -1.96
LIMA1-214ENST00000552783 IGKV2D-30A0A075B6S6 120 aa2.82□□□□□ -1.96
LIMA1-214ENST00000552783 IGKV2-30P06310 120 aa2.82□□□□□ -1.96
LIMA1-214ENST00000552783 LRP1BQ9NZR2 4599 aa2.82□□□□□ -1.96
LIMA1-214ENST00000552783 IGLV7-43P04211 117 aa2.82□□□□□ -1.96
LIMA1-214ENST00000552783 DNAH5Q8TE73 4624 aa2.81□□□□□ -1.96
LIMA1-214ENST00000552783 SPINK1P00995 79 aa2.8□□□□□ -1.96
LIMA1-214ENST00000552783 FAT2Q9NYQ8 4349 aa2.8□□□□□ -1.96
LIMA1-214ENST00000552783 KRTAP10-2P60368 255 aa2.8□□□□□ -1.96
LIMA1-214ENST00000552783 DMAC1Q96GE9 116 aa2.8□□□□□ -1.96
LIMA1-214ENST00000552783 ACYP2P14621 99 aa2.79□□□□□ -1.96
LIMA1-214ENST00000552783 VPS13BQ7Z7G8 4022 aa2.79□□□□□ -1.96
LIMA1-214ENST00000552783 A0A1B0GU69 56 aa2.79□□□□□ -1.96
LIMA1-214ENST00000552783 SMR3BP02814 79 aaPredicted RBP2.79□□□□□ -1.96
LIMA1-214ENST00000552783 PLA2G1BP04054 148 aaKnown RBP2.79□□□□□ -1.96
LIMA1-214ENST00000552783 FLG2Q5D862 2391 aaPredicted RBP2.78□□□□□ -1.96
LIMA1-214ENST00000552783 SPATA8Q6RVD6 105 aa2.78□□□□□ -1.96
LIMA1-214ENST00000552783 LINC01554Q52M75 96 aa2.77□□□□□ -1.97
LIMA1-214ENST00000552783 TYMSOSQ8TAI1 123 aa2.77□□□□□ -1.97
LIMA1-214ENST00000552783 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
LIMA1-214ENST00000552783 CSAG1Q6PB30 78 aa2.76□□□□□ -1.97
LIMA1-214ENST00000552783 SSBP3-AS1Q7Z2R9 100 aa2.76□□□□□ -1.97
LIMA1-214ENST00000552783 HYDINQ4G0P3 5121 aa2.76□□□□□ -1.97
LIMA1-214ENST00000552783 KRTAP10-1P60331 282 aa2.75□□□□□ -1.97
LIMA1-214ENST00000552783 KRTAP16-1A8MUX0 517 aa2.74□□□□□ -1.97
LIMA1-214ENST00000552783 C9orf92A6NGG3 77 aa2.74□□□□□ -1.97
LIMA1-214ENST00000552783 UQCR11O14957 56 aa2.74□□□□□ -1.97
LIMA1-214ENST00000552783 KRTAP13-2Q52LG2 175 aa2.73□□□□□ -1.97
LIMA1-214ENST00000552783 KRTAP4-5Q9BYR2 181 aa2.73□□□□□ -1.97
LIMA1-214ENST00000552783 PKHD1P08F94 4074 aa2.73□□□□□ -1.97
LIMA1-214ENST00000552783 PKD1P98161 4303 aa2.73□□□□□ -1.97
LIMA1-214ENST00000552783 Q8N1X5 172 aa2.73□□□□□ -1.97
LIMA1-214ENST00000552783 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
LIMA1-214ENST00000552783 LINC00304Q8N9R0 145 aa2.7□□□□□ -1.98
LIMA1-214ENST00000552783 H0YAA0 97 aa2.69□□□□□ -1.98
LIMA1-214ENST00000552783 KRTAP4-8Q9BYQ9 185 aa2.69□□□□□ -1.98
LIMA1-214ENST00000552783 Q6ZSA8 131 aa2.69□□□□□ -1.98
LIMA1-214ENST00000552783 CRIPTQ9P021 101 aa2.69□□□□□ -1.98
LIMA1-214ENST00000552783 KRTAP1-4P0C5Y4 121 aa2.67□□□□□ -1.98
LIMA1-214ENST00000552783 A8MUU9 505 aa2.66□□□□□ -1.98
LIMA1-214ENST00000552783 FAT1Q14517 4588 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms