RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-208ENST00000551009 NCR3O14931 201 aa2.05□□□□□ -2.08
ATP2B1-208ENST00000551009 MRPL33O75394 65 aaKnown RBP2.05□□□□□ -2.08
ATP2B1-208ENST00000551009 COX6B1P14854 86 aa2.05□□□□□ -2.08
ATP2B1-208ENST00000551009 DEFB114Q30KQ6 69 aa2.05□□□□□ -2.08
ATP2B1-208ENST00000551009 ZCCHC13Q8WW36 166 aaKnown RBP2.05□□□□□ -2.08
ATP2B1-208ENST00000551009 HYDINQ4G0P3 5121 aa2.05□□□□□ -2.08
ATP2B1-208ENST00000551009 TRRAPQ9Y4A5 3859 aa2.05□□□□□ -2.08
ATP2B1-208ENST00000551009 CMYA5Q8N3K9 4069 aa2.05□□□□□ -2.08
ATP2B1-208ENST00000551009 ETDCA0A1B0GVM5 59 aa2.04□□□□□ -2.08
ATP2B1-208ENST00000551009 COX7BP24311 80 aa2.04□□□□□ -2.08
ATP2B1-208ENST00000551009 UNC13CQ8NB66 2214 aa2.04□□□□□ -2.08
ATP2B1-208ENST00000551009 WNK1Q9H4A3 2382 aa2.04□□□□□ -2.08
ATP2B1-208ENST00000551009 CACNA1CQ13936 2221 aa2.03□□□□□ -2.08
ATP2B1-208ENST00000551009 MED12Q93074 2177 aa2.03□□□□□ -2.08
ATP2B1-208ENST00000551009 Q96NJ1 140 aa2.03□□□□□ -2.08
ATP2B1-208ENST00000551009 HRNRQ86YZ3 2850 aaPredicted RBP2.03□□□□□ -2.08
ATP2B1-208ENST00000551009 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
ATP2B1-208ENST00000551009 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
ATP2B1-208ENST00000551009 KRTAP13-4Q3LI77 160 aa2.02□□□□□ -2.09
ATP2B1-208ENST00000551009 CCL19Q99731 98 aa2.02□□□□□ -2.09
ATP2B1-208ENST00000551009 TENM1Q9UKZ4 2725 aa2.01□□□□□ -2.09
ATP2B1-208ENST00000551009 C10orf99Q6UWK7 81 aa2.01□□□□□ -2.09
ATP2B1-208ENST00000551009 SMR3AQ99954 134 aa2.01□□□□□ -2.09
ATP2B1-208ENST00000551009 SSBP3-AS1Q7Z2R9 100 aa2□□□□□ -2.09
ATP2B1-208ENST00000551009 KCNQ1DNQ9H478 68 aa2□□□□□ -2.09
ATP2B1-208ENST00000551009 LINC00472Q9H8W2 130 aa2□□□□□ -2.09
ATP2B1-208ENST00000551009 ARFGEF3Q5TH69 2177 aa1.99□□□□□ -2.09
ATP2B1-208ENST00000551009 RYR2Q92736 4967 aa1.99□□□□□ -2.09
ATP2B1-208ENST00000551009 LINC00959A0A1B0GUT2 108 aa1.99□□□□□ -2.09
ATP2B1-208ENST00000551009 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.99□□□□□ -2.09
ATP2B1-208ENST00000551009 SMIM11BQ8TCY0 68 aa1.99□□□□□ -2.09
ATP2B1-208ENST00000551009 INTS1Q8N201 2190 aaKnown RBP1.99□□□□□ -2.09
ATP2B1-208ENST00000551009 SPTY2D1-AS1A0A0U1RR47 76 aa1.98□□□□□ -2.09
ATP2B1-208ENST00000551009 LINC00575Q6W349 94 aa1.98□□□□□ -2.09
ATP2B1-208ENST00000551009 U3KQA8 63 aa1.98□□□□□ -2.09
ATP2B1-208ENST00000551009 DNAJC13O75165 2243 aa1.97□□□□□ -2.09
ATP2B1-208ENST00000551009 VWFP04275 2813 aa1.97□□□□□ -2.09
ATP2B1-208ENST00000551009 UBR4Q5T4S7 5183 aa1.96□□□□□ -2.1
ATP2B1-208ENST00000551009 CPSF4LA6NMK7 179 aaKnown RBP1.96□□□□□ -2.1
ATP2B1-208ENST00000551009 PIN1P1O15428 100 aa1.96□□□□□ -2.1
ATP2B1-208ENST00000551009 Q6ZRX8 168 aa1.96□□□□□ -2.1
ATP2B1-208ENST00000551009 ALPK2Q86TB3 2170 aa1.96□□□□□ -2.1
ATP2B1-208ENST00000551009 SACSQ9NZJ4 4579 aa1.96□□□□□ -2.1
ATP2B1-208ENST00000551009 HERC2O95714 4834 aa1.95□□□□□ -2.1
ATP2B1-208ENST00000551009 ABCA1O95477 2261 aa1.95□□□□□ -2.1
ATP2B1-208ENST00000551009 SPINK13Q1W4C9 94 aa1.95□□□□□ -2.1
ATP2B1-208ENST00000551009 PCOTHQ58A44 107 aa1.95□□□□□ -2.1
ATP2B1-208ENST00000551009 SMIM2Q9BVW6 85 aa1.95□□□□□ -2.1
ATP2B1-208ENST00000551009 USF3Q68DE3 2245 aa1.94□□□□□ -2.1
ATP2B1-208ENST00000551009 DOCK10Q96BY6 2186 aa1.94□□□□□ -2.1
ATP2B1-208ENST00000551009 DEFB131BA0A096LNP1 70 aa1.94□□□□□ -2.1
ATP2B1-208ENST00000551009 DEFB109BQ30KR1 87 aa1.94□□□□□ -2.1
ATP2B1-208ENST00000551009 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
ATP2B1-208ENST00000551009 PLAC4Q8WY50 150 aa1.94□□□□□ -2.1
ATP2B1-208ENST00000551009 DYNC2H1Q8NCM8 4307 aaKnown RBP1.94□□□□□ -2.1
ATP2B1-208ENST00000551009 TENM3Q9P273 2699 aa1.94□□□□□ -2.1
ATP2B1-208ENST00000551009 LY6G6CO95867 125 aa1.93□□□□□ -2.1
ATP2B1-208ENST00000551009 A0A096LNT2 108 aa1.92□□□□□ -2.1
ATP2B1-208ENST00000551009 ANGP03950 147 aaKnown RBP1.92□□□□□ -2.1
ATP2B1-208ENST00000551009 IAPPP10997 89 aa1.92□□□□□ -2.1
ATP2B1-208ENST00000551009 LINC00158P58513 81 aa1.92□□□□□ -2.1
ATP2B1-208ENST00000551009 CSMD3Q7Z407 3707 aa1.91□□□□□ -2.1
ATP2B1-208ENST00000551009 GVQW2A0A096LPI5 108 aaPredicted RBP1.91□□□□□ -2.1
ATP2B1-208ENST00000551009 TFF3Q07654 80 aa1.91□□□□□ -2.1
ATP2B1-208ENST00000551009 DEFB133Q30KQ1 61 aa1.91□□□□□ -2.1
ATP2B1-208ENST00000551009 LINC00308Q8TCZ7 52 aa1.91□□□□□ -2.1
ATP2B1-208ENST00000551009 COL7A1Q02388 2944 aa1.91□□□□□ -2.1
ATP2B1-208ENST00000551009 CADP27708 2225 aa1.91□□□□□ -2.1
ATP2B1-208ENST00000551009 ABCA13Q86UQ4 5058 aa1.91□□□□□ -2.1
ATP2B1-208ENST00000551009 DNAH1Q9P2D7 4330 aa1.9□□□□□ -2.11
ATP2B1-208ENST00000551009 CRIPTQ9P021 101 aa1.9□□□□□ -2.11
ATP2B1-208ENST00000551009 FRAS1Q86XX4 4008 aa1.9□□□□□ -2.11
ATP2B1-208ENST00000551009 ROS1P08922 2347 aa1.9□□□□□ -2.11
ATP2B1-208ENST00000551009 G3V318 75 aa1.89□□□□□ -2.11
ATP2B1-208ENST00000551009 NDUFA1O15239 70 aa1.89□□□□□ -2.11
ATP2B1-208ENST00000551009 UBE2DNLQ8IWF7 75 aa1.89□□□□□ -2.11
ATP2B1-208ENST00000551009 Q8IZM0 81 aa1.89□□□□□ -2.11
ATP2B1-208ENST00000551009 TENM2Q9NT68 2774 aa1.89□□□□□ -2.11
ATP2B1-208ENST00000551009 FREM1Q5H8C1 2179 aa1.89□□□□□ -2.11
ATP2B1-208ENST00000551009 LYSTQ99698 3801 aa1.89□□□□□ -2.11
ATP2B1-208ENST00000551009 HERC1Q15751 4861 aa1.88□□□□□ -2.11
ATP2B1-208ENST00000551009 CRIP1P50238 77 aa1.88□□□□□ -2.11
ATP2B1-208ENST00000551009 CDKN2A-AS1Q9UH64 79 aa1.88□□□□□ -2.11
ATP2B1-208ENST00000551009 KIAA1109Q2LD37 5005 aa1.88□□□□□ -2.11
ATP2B1-208ENST00000551009 DNAH9Q9NYC9 4486 aa1.88□□□□□ -2.11
ATP2B1-208ENST00000551009 DNAH3Q8TD57 4116 aa1.88□□□□□ -2.11
ATP2B1-208ENST00000551009 ARHGAP5-AS1Q96IT6 56 aa1.87□□□□□ -2.11
ATP2B1-208ENST00000551009 USMG5Q96IX5 58 aa1.87□□□□□ -2.11
ATP2B1-208ENST00000551009 PRB3Q04118 309 aaPredicted RBP1.86□□□□□ -2.11
ATP2B1-208ENST00000551009 CNFNQ9BYD5 112 aa1.86□□□□□ -2.11
ATP2B1-208ENST00000551009 DNAH7Q8WXX0 4024 aa1.86□□□□□ -2.11
ATP2B1-208ENST00000551009 HECTD4Q9Y4D8 3996 aa1.86□□□□□ -2.11
ATP2B1-208ENST00000551009 RPL37P61927 97 aaKnown RBP1.85□□□□□ -2.11
ATP2B1-208ENST00000551009 STAB2Q8WWQ8 2551 aa1.84□□□□□ -2.11
ATP2B1-208ENST00000551009 KRTAP12-1P59990 96 aa1.84□□□□□ -2.11
ATP2B1-208ENST00000551009 MINOS1Q5TGZ0 78 aa1.84□□□□□ -2.11
ATP2B1-208ENST00000551009 TTTY10Q9BZA0 68 aa1.84□□□□□ -2.11
ATP2B1-208ENST00000551009 TP53AIP1Q9HCN2 124 aa1.84□□□□□ -2.11
ATP2B1-208ENST00000551009 TNCP24821 2201 aa1.83□□□□□ -2.12
ATP2B1-208ENST00000551009 PLCE1Q9P212 2302 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms