RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SPTSSBQ8NFR3 76 aa8.11□□□□□ -1.11
PRPF40B-209ENST00000548825 PLAC8Q9NZF1 115 aa8.11□□□□□ -1.11
PRPF40B-209ENST00000548825 MRPL34Q9BQ48 92 aaKnown RBP8.1□□□□□ -1.11
PRPF40B-209ENST00000548825 DNAH2Q9P225 4427 aa8.1□□□□□ -1.11
PRPF40B-209ENST00000548825 DNAH6Q9C0G6 4158 aa8.1□□□□□ -1.11
PRPF40B-209ENST00000548825 CD164Q04900 197 aa8.09□□□□□ -1.11
PRPF40B-209ENST00000548825 COA5Q86WW8 74 aa8.09□□□□□ -1.11
PRPF40B-209ENST00000548825 DNAH8Q96JB1 4490 aa8.07□□□□□ -1.12
PRPF40B-209ENST00000548825 DNAH17Q9UFH2 4485 aa8.07□□□□□ -1.12
PRPF40B-209ENST00000548825 SMR3BP02814 79 aaPredicted RBP8.05□□□□□ -1.12
PRPF40B-209ENST00000548825 HECTD4Q9Y4D8 3996 aa8.05□□□□□ -1.12
PRPF40B-209ENST00000548825 KRTAP10-1P60331 282 aa8.04□□□□□ -1.12
PRPF40B-209ENST00000548825 LINC00483Q53H64 154 aa8.04□□□□□ -1.12
PRPF40B-209ENST00000548825 Q5W150 140 aa8.04□□□□□ -1.12
PRPF40B-209ENST00000548825 PMAIP1Q13794 54 aa8.04□□□□□ -1.12
PRPF40B-209ENST00000548825 CYP4F30PQ9H0H9 118 aa8.04□□□□□ -1.12
PRPF40B-209ENST00000548825 A6NED7 52 aa8.03□□□□□ -1.12
PRPF40B-209ENST00000548825 Q8N9P0 234 aaPredicted RBP8.02□□□□□ -1.13
PRPF40B-209ENST00000548825 TP53AIP1Q9HCN2 124 aa8.01□□□□□ -1.13
PRPF40B-209ENST00000548825 PRR26Q8N8Z3 221 aa8.01□□□□□ -1.13
PRPF40B-209ENST00000548825 H3BS24 57 aa8.01□□□□□ -1.13
PRPF40B-209ENST00000548825 IGKV2D-30A0A075B6S6 120 aa8□□□□□ -1.13
PRPF40B-209ENST00000548825 IGKV2-30P06310 120 aa8□□□□□ -1.13
PRPF40B-209ENST00000548825 H3BPC8 53 aa7.99□□□□□ -1.13
PRPF40B-209ENST00000548825 PLA2G1BP04054 148 aaKnown RBP7.98□□□□□ -1.13
PRPF40B-209ENST00000548825 LINC00313P59037 77 aa7.98□□□□□ -1.13
PRPF40B-209ENST00000548825 Q1T7F1 81 aa7.98□□□□□ -1.13
PRPF40B-209ENST00000548825 LRP1BQ9NZR2 4599 aa7.95□□□□□ -1.14
PRPF40B-209ENST00000548825 IGLV7-46A0A075B6I9 117 aa7.95□□□□□ -1.14
PRPF40B-209ENST00000548825 SPANXA2-OT1Q8N9U9 137 aa7.95□□□□□ -1.14
PRPF40B-209ENST00000548825 Q5VV11 94 aa7.95□□□□□ -1.14
PRPF40B-209ENST00000548825 KRTAP13-2Q52LG2 175 aa7.93□□□□□ -1.14
PRPF40B-209ENST00000548825 DMBT1Q9UGM3 2413 aaPredicted RBP7.93□□□□□ -1.14
PRPF40B-209ENST00000548825 HYDINQ4G0P3 5121 aa7.93□□□□□ -1.14
PRPF40B-209ENST00000548825 SPINK1P00995 79 aa7.93□□□□□ -1.14
PRPF40B-209ENST00000548825 HRES1P13985 223 aa7.93□□□□□ -1.14
PRPF40B-209ENST00000548825 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
PRPF40B-209ENST00000548825 TYMSOSQ8TAI1 123 aa7.91□□□□□ -1.14
PRPF40B-209ENST00000548825 DYNC2H1Q8NCM8 4307 aaKnown RBP7.91□□□□□ -1.14
PRPF40B-209ENST00000548825 SSBP3-AS1Q7Z2R9 100 aa7.91□□□□□ -1.14
PRPF40B-209ENST00000548825 LIMD2Q9BT23 127 aa7.9□□□□□ -1.15
PRPF40B-209ENST00000548825 LOC101927531A0A1B0GV80 90 aa7.86□□□□□ -1.15
PRPF40B-209ENST00000548825 C9orf92A6NGG3 77 aa7.86□□□□□ -1.15
PRPF40B-209ENST00000548825 DNAH5Q8TE73 4624 aa7.85□□□□□ -1.15
PRPF40B-209ENST00000548825 ASB16-AS1Q495Z4 193 aa7.83□□□□□ -1.16
PRPF40B-209ENST00000548825 PKHD1P08F94 4074 aa7.82□□□□□ -1.16
PRPF40B-209ENST00000548825 SPINK7P58062 85 aa7.81□□□□□ -1.16
PRPF40B-209ENST00000548825 Q8N1X5 172 aa7.81□□□□□ -1.16
PRPF40B-209ENST00000548825 VPS13BQ7Z7G8 4022 aa7.8□□□□□ -1.16
PRPF40B-209ENST00000548825 FAM229AH3BQW9 127 aa7.8□□□□□ -1.16
PRPF40B-209ENST00000548825 ACYP2P14621 99 aa7.79□□□□□ -1.16
PRPF40B-209ENST00000548825 C8orf87E5RJ46 101 aa7.78□□□□□ -1.16
PRPF40B-209ENST00000548825 C7orf65Q6ZTY9 151 aa7.78□□□□□ -1.16
PRPF40B-209ENST00000548825 LCA10Q71F78 164 aa7.78□□□□□ -1.16
PRPF40B-209ENST00000548825 FAT1Q14517 4588 aa7.78□□□□□ -1.16
PRPF40B-209ENST00000548825 RBM12B-AS1Q9P1G2 102 aa7.77□□□□□ -1.17
PRPF40B-209ENST00000548825 ALMS1Q8TCU4 4167 aa7.77□□□□□ -1.17
PRPF40B-209ENST00000548825 KRTAP1-4P0C5Y4 121 aa7.76□□□□□ -1.17
PRPF40B-209ENST00000548825 FAT2Q9NYQ8 4349 aa7.74□□□□□ -1.17
PRPF40B-209ENST00000548825 LINC00304Q8N9R0 145 aa7.73□□□□□ -1.17
PRPF40B-209ENST00000548825 A0A1B0GU69 56 aa7.71□□□□□ -1.17
PRPF40B-209ENST00000548825 Q6ZSA8 131 aa7.71□□□□□ -1.17
PRPF40B-209ENST00000548825 Q75L30 129 aa7.7□□□□□ -1.18
PRPF40B-209ENST00000548825 LINC01558Q9Y6Z2 57 aa7.7□□□□□ -1.18
PRPF40B-209ENST00000548825 KRTAP13-3Q3SY46 172 aa7.67□□□□□ -1.18
PRPF40B-209ENST00000548825 CDC42SE1Q9NRR8 79 aa7.62□□□□□ -1.19
PRPF40B-209ENST00000548825 DMAC1Q96GE9 116 aa7.62□□□□□ -1.19
PRPF40B-209ENST00000548825 KRTAP16-1A8MUX0 517 aa7.61□□□□□ -1.19
PRPF40B-209ENST00000548825 PKD1P98161 4303 aa7.59□□□□□ -1.19
PRPF40B-209ENST00000548825 ATP11AUNQ6ZP68 121 aa7.59□□□□□ -1.19
PRPF40B-209ENST00000548825 DYNC1H1Q14204 4646 aaKnown RBP7.57□□□□□ -1.2
PRPF40B-209ENST00000548825 KTN1-AS1Q86SY8 53 aa7.54□□□□□ -1.2
PRPF40B-209ENST00000548825 SACSQ9NZJ4 4579 aa7.54□□□□□ -1.2
PRPF40B-209ENST00000548825 PRAC1Q96KF2 57 aa7.53□□□□□ -1.2
PRPF40B-209ENST00000548825 MYCBP2O75592 4640 aa7.53□□□□□ -1.2
PRPF40B-209ENST00000548825 KMT2CQ8NEZ4 4911 aaKnown RBP7.51□□□□□ -1.21
PRPF40B-209ENST00000548825 MIR22HGQ0VDD5 57 aa7.5□□□□□ -1.21
PRPF40B-209ENST00000548825 ADM2Q7Z4H4 148 aa7.48□□□□□ -1.21
PRPF40B-209ENST00000548825 LRP1Q07954 4544 aaKnown RBP7.48□□□□□ -1.21
PRPF40B-209ENST00000548825 UQCR11O14957 56 aa7.47□□□□□ -1.21
PRPF40B-209ENST00000548825 A6NN06 94 aa7.45□□□□□ -1.22
PRPF40B-209ENST00000548825 APOBP04114 4563 aaKnown RBP7.41□□□□□ -1.22
PRPF40B-209ENST00000548825 Q5VSD8 79 aa7.34□□□□□ -1.23
PRPF40B-209ENST00000548825 FAT3Q8TDW7 4589 aa7.34□□□□□ -1.23
PRPF40B-209ENST00000548825 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.24
PRPF40B-209ENST00000548825 A0A1B0GVY2 172 aa7.33□□□□□ -1.24
PRPF40B-209ENST00000548825 A0A0A0MQY5 61 aa7.31□□□□□ -1.24
PRPF40B-209ENST00000548825 CRIPTQ9P021 101 aa7.29□□□□□ -1.24
PRPF40B-209ENST00000548825 KRTAP3-1Q9BYR8 98 aa7.28□□□□□ -1.24
PRPF40B-209ENST00000548825 KIAA1109Q2LD37 5005 aa7.28□□□□□ -1.24
PRPF40B-209ENST00000548825 A8MUU9 505 aa7.28□□□□□ -1.24
PRPF40B-209ENST00000548825 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.25
PRPF40B-209ENST00000548825 A0A0D9SG42 100 aa7.26□□□□□ -1.25
PRPF40B-209ENST00000548825 KRTAP10-4P60372 401 aaPredicted RBP7.26□□□□□ -1.25
PRPF40B-209ENST00000548825 A0A1B0GU33 70 aa7.26□□□□□ -1.25
PRPF40B-209ENST00000548825 RYR2Q92736 4967 aa7.25□□□□□ -1.25
PRPF40B-209ENST00000548825 RPS29P62273 56 aaKnown RBP7.23□□□□□ -1.25
PRPF40B-209ENST00000548825 LINC01554Q52M75 96 aa7.21□□□□□ -1.25
PRPF40B-209ENST00000548825 CSAG1Q6PB30 78 aa7.21□□□□□ -1.26
PRPF40B-209ENST00000548825 H0YAA0 97 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 241.5 ms