RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 COA5Q86WW8 74 aa5.44□□□□□ -1.54
CLIP1-218ENST00000545889 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.44□□□□□ -1.54
CLIP1-218ENST00000545889 KRTAP1-5Q9BYS1 174 aa5.43□□□□□ -1.54
CLIP1-218ENST00000545889 Q8N377 158 aa5.43□□□□□ -1.54
CLIP1-218ENST00000545889 KRTAP21-3Q3LHN1 58 aa5.4□□□□□ -1.55
CLIP1-218ENST00000545889 TENM2Q9NT68 2774 aa5.39□□□□□ -1.55
CLIP1-218ENST00000545889 SEC61BP60468 96 aaKnown RBP5.39□□□□□ -1.55
CLIP1-218ENST00000545889 Q75L30 129 aa5.38□□□□□ -1.55
CLIP1-218ENST00000545889 A6NN06 94 aa5.37□□□□□ -1.55
CLIP1-218ENST00000545889 IGLV5-48A0A075B6I7 105 aa5.36□□□□□ -1.55
CLIP1-218ENST00000545889 Q8NDZ9 215 aa5.36□□□□□ -1.55
CLIP1-218ENST00000545889 Q8N1X5 172 aa5.35□□□□□ -1.55
CLIP1-218ENST00000545889 SPINK7P58062 85 aa5.35□□□□□ -1.55
CLIP1-218ENST00000545889 PLAC8Q9NZF1 115 aa5.35□□□□□ -1.55
CLIP1-218ENST00000545889 SPINT4Q6UDR6 99 aa5.34□□□□□ -1.55
CLIP1-218ENST00000545889 CAMK2N1Q7Z7J9 78 aa5.33□□□□□ -1.56
CLIP1-218ENST00000545889 ADM2Q7Z4H4 148 aa5.33□□□□□ -1.56
CLIP1-218ENST00000545889 KRTAP26-1Q6PEX3 210 aa5.32□□□□□ -1.56
CLIP1-218ENST00000545889 A0A1W2PNM2 257 aa5.31□□□□□ -1.56
CLIP1-218ENST00000545889 KRTAP10-1P60331 282 aa5.31□□□□□ -1.56
CLIP1-218ENST00000545889 CRIPTQ9P021 101 aa5.31□□□□□ -1.56
CLIP1-218ENST00000545889 UQCR11O14957 56 aa5.3□□□□□ -1.56
CLIP1-218ENST00000545889 A0A0D9SG42 100 aa5.3□□□□□ -1.56
CLIP1-218ENST00000545889 KRTAP10-2P60368 255 aa5.29□□□□□ -1.56
CLIP1-218ENST00000545889 SPANXA2-OT1Q8N9U9 137 aa5.29□□□□□ -1.56
CLIP1-218ENST00000545889 CSAG1Q6PB30 78 aa5.28□□□□□ -1.56
CLIP1-218ENST00000545889 FBN3Q75N90 2809 aa5.27□□□□□ -1.57
CLIP1-218ENST00000545889 ZCCHC13Q8WW36 166 aaKnown RBP5.27□□□□□ -1.57
CLIP1-218ENST00000545889 Q6ZR54 194 aa5.24□□□□□ -1.57
CLIP1-218ENST00000545889 LINC01558Q9Y6Z2 57 aa5.24□□□□□ -1.57
CLIP1-218ENST00000545889 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
CLIP1-218ENST00000545889 PANO1I0J062 215 aa5.21□□□□□ -1.58
CLIP1-218ENST00000545889 Q6ZRN7 208 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-218ENST00000545889 HRES1P13985 223 aa5.17□□□□□ -1.58
CLIP1-218ENST00000545889 R4GN34 69 aa5.17□□□□□ -1.58
CLIP1-218ENST00000545889 MEGF8Q7Z7M0 2845 aa5.16□□□□□ -1.58
CLIP1-218ENST00000545889 S4R3F8 94 aa5.14□□□□□ -1.59
CLIP1-218ENST00000545889 SPRR1AP35321 89 aa5.12□□□□□ -1.59
CLIP1-218ENST00000545889 COL7A1Q02388 2944 aa5.11□□□□□ -1.59
CLIP1-218ENST00000545889 PLAC4Q8WY50 150 aa5.11□□□□□ -1.59
CLIP1-218ENST00000545889 SPRR1BP22528 89 aa5.09□□□□□ -1.59
CLIP1-218ENST00000545889 KRTAP7-1Q8IUC3 87 aa5.09□□□□□ -1.59
CLIP1-218ENST00000545889 KRTAP11-1Q8IUC1 163 aa5.09□□□□□ -1.59
CLIP1-218ENST00000545889 A0A1B0GU33 70 aa5.09□□□□□ -1.6
CLIP1-218ENST00000545889 LINC00483Q53H64 154 aa5.07□□□□□ -1.6
CLIP1-218ENST00000545889 DNHD1Q96M86 4753 aa5.06□□□□□ -1.6
CLIP1-218ENST00000545889 A0A0A0MQY5 61 aa5.04□□□□□ -1.6
CLIP1-218ENST00000545889 LUZP6Q538Z0 58 aa5.04□□□□□ -1.6
CLIP1-218ENST00000545889 MMP24-AS1A0A0U1RRL7 71 aa5.04□□□□□ -1.6
CLIP1-218ENST00000545889 HUWE1Q7Z6Z7 4374 aaKnown RBP5.04□□□□□ -1.6
CLIP1-218ENST00000545889 KRTAP29-1A8MX34 341 aaPredicted RBP5.04□□□□□ -1.6
CLIP1-218ENST00000545889 A0A087X002 238 aa5.03□□□□□ -1.6
CLIP1-218ENST00000545889 Q5W150 140 aa5.02□□□□□ -1.61
CLIP1-218ENST00000545889 M0QZ58 72 aa5.01□□□□□ -1.61
CLIP1-218ENST00000545889 ROMO1P60602 79 aa5.01□□□□□ -1.61
CLIP1-218ENST00000545889 KRTAP4-16G5E9R7 235 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-218ENST00000545889 LINC00472Q9H8W2 130 aa5□□□□□ -1.61
CLIP1-218ENST00000545889 SRRM2Q9UQ35 2752 aaKnown RBP5□□□□□ -1.61
CLIP1-218ENST00000545889 ASB16-AS1Q495Z4 193 aa5□□□□□ -1.61
CLIP1-218ENST00000545889 SPATA8Q6RVD6 105 aa4.98□□□□□ -1.61
CLIP1-218ENST00000545889 DMAC1Q96GE9 116 aa4.98□□□□□ -1.61
CLIP1-218ENST00000545889 DNAH9Q9NYC9 4486 aa4.97□□□□□ -1.61
CLIP1-218ENST00000545889 C20orf166-AS1Q96NR2 134 aa4.93□□□□□ -1.62
CLIP1-218ENST00000545889 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
CLIP1-218ENST00000545889 CSMD3Q7Z407 3707 aa4.93□□□□□ -1.62
CLIP1-218ENST00000545889 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
CLIP1-218ENST00000545889 KRTAP16-1A8MUX0 517 aa4.92□□□□□ -1.62
CLIP1-218ENST00000545889 PRKDCP78527 4128 aaKnown RBP4.91□□□□□ -1.62
CLIP1-218ENST00000545889 ANK2Q01484 3957 aa4.9□□□□□ -1.62
CLIP1-218ENST00000545889 RPS29P62273 56 aaKnown RBP4.88□□□□□ -1.63
CLIP1-218ENST00000545889 KRTAP13-1Q8IUC0 172 aa4.88□□□□□ -1.63
CLIP1-218ENST00000545889 H1FX-AS1Q4G0G2 97 aa4.88□□□□□ -1.63
CLIP1-218ENST00000545889 A8MUU9 505 aa4.86□□□□□ -1.63
CLIP1-218ENST00000545889 RPL37P61927 97 aaKnown RBP4.86□□□□□ -1.63
CLIP1-218ENST00000545889 PLECQ15149 4684 aaKnown RBP4.84□□□□□ -1.63
CLIP1-218ENST00000545889 NOTCH2NLQ7Z3S9 236 aa4.84□□□□□ -1.63
CLIP1-218ENST00000545889 KRTAP13-2Q52LG2 175 aa4.83□□□□□ -1.64
CLIP1-218ENST00000545889 A0A1B0GVY2 172 aa4.83□□□□□ -1.64
CLIP1-218ENST00000545889 CMYA5Q8N3K9 4069 aa4.81□□□□□ -1.64
CLIP1-218ENST00000545889 STARD9Q9P2P6 4700 aa4.79□□□□□ -1.64
CLIP1-218ENST00000545889 KRTAP1-4P0C5Y4 121 aa4.76□□□□□ -1.65
CLIP1-218ENST00000545889 DNAH3Q8TD57 4116 aa4.75□□□□□ -1.65
CLIP1-218ENST00000545889 P0C880 135 aa4.73□□□□□ -1.65
CLIP1-218ENST00000545889 DNAH10Q8IVF4 4471 aa4.72□□□□□ -1.65
CLIP1-218ENST00000545889 DNAH1Q9P2D7 4330 aa4.69□□□□□ -1.66
CLIP1-218ENST00000545889 VPS13DQ5THJ4 4388 aa4.68□□□□□ -1.66
CLIP1-218ENST00000545889 KMT2AQ03164 3969 aa4.67□□□□□ -1.66
CLIP1-218ENST00000545889 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
CLIP1-218ENST00000545889 DNAH11Q96DT5 4516 aa4.65□□□□□ -1.66
CLIP1-218ENST00000545889 H0YAA0 97 aa4.65□□□□□ -1.67
CLIP1-218ENST00000545889 KRTAP10-8P60410 259 aa4.65□□□□□ -1.67
CLIP1-218ENST00000545889 TPRXLQ17RH7 258 aa4.65□□□□□ -1.67
CLIP1-218ENST00000545889 XP32Q5T750 250 aa4.65□□□□□ -1.67
CLIP1-218ENST00000545889 LYSTQ99698 3801 aa4.65□□□□□ -1.67
CLIP1-218ENST00000545889 C10orf95Q9H7T3 257 aa4.63□□□□□ -1.67
CLIP1-218ENST00000545889 TNP1P09430 55 aa4.62□□□□□ -1.67
CLIP1-218ENST00000545889 ALMS1Q8TCU4 4167 aa4.61□□□□□ -1.67
CLIP1-218ENST00000545889 DNAH5Q8TE73 4624 aa4.61□□□□□ -1.67
CLIP1-218ENST00000545889 DNAH7Q8WXX0 4024 aa4.58□□□□□ -1.68
CLIP1-218ENST00000545889 KRTAP4-5Q9BYR2 181 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms