RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 CUBNO60494 3623 aa3.04□□□□□ -1.92
UBE4A-203ENST00000545354 DEFB108BQ8NET1 73 aa3.04□□□□□ -1.92
UBE4A-203ENST00000545354 PSORS1C2Q9UIG4 136 aa3.04□□□□□ -1.92
UBE4A-203ENST00000545354 A8MTW9 85 aa3.03□□□□□ -1.92
UBE4A-203ENST00000545354 DEFB116Q30KQ4 102 aa3.02□□□□□ -1.93
UBE4A-203ENST00000545354 PKD1L1Q8TDX9 2849 aa3.02□□□□□ -1.93
UBE4A-203ENST00000545354 PROK1P58294 105 aa3.01□□□□□ -1.93
UBE4A-203ENST00000545354 SMR3AQ99954 134 aa3.01□□□□□ -1.93
UBE4A-203ENST00000545354 RHPN1-AS1Q9BWJ2 59 aa3.01□□□□□ -1.93
UBE4A-203ENST00000545354 MEGF8Q7Z7M0 2845 aa3.01□□□□□ -1.93
UBE4A-203ENST00000545354 ZANQ9Y493 2812 aa3.01□□□□□ -1.93
UBE4A-203ENST00000545354 ANK2Q01484 3957 aa3.01□□□□□ -1.93
UBE4A-203ENST00000545354 AKAP6Q13023 2319 aa3□□□□□ -1.93
UBE4A-203ENST00000545354 TLN2Q9Y4G6 2542 aa3□□□□□ -1.93
UBE4A-203ENST00000545354 COX6B2Q6YFQ2 88 aa3□□□□□ -1.93
UBE4A-203ENST00000545354 TGP01266 2768 aa3□□□□□ -1.93
UBE4A-203ENST00000545354 PRO2289Q9P1D8 64 aa2.99□□□□□ -1.93
UBE4A-203ENST00000545354 SPINK13Q1W4C9 94 aa2.99□□□□□ -1.93
UBE4A-203ENST00000545354 MRPL34Q9BQ48 92 aaKnown RBP2.99□□□□□ -1.93
UBE4A-203ENST00000545354 NOTCH1P46531 2555 aa2.98□□□□□ -1.93
UBE4A-203ENST00000545354 MMP24-AS1A0A0U1RRL7 71 aa2.98□□□□□ -1.93
UBE4A-203ENST00000545354 DEFB105AQ8NG35 78 aa2.98□□□□□ -1.93
UBE4A-203ENST00000545354 CRIPTQ9P021 101 aa2.98□□□□□ -1.93
UBE4A-203ENST00000545354 HRNRQ86YZ3 2850 aaPredicted RBP2.97□□□□□ -1.93
UBE4A-203ENST00000545354 NBEAL2Q6ZNJ1 2754 aa2.97□□□□□ -1.93
UBE4A-203ENST00000545354 ANK3Q12955 4377 aaKnown RBP2.97□□□□□ -1.93
UBE4A-203ENST00000545354 Q6ZRX8 168 aa2.96□□□□□ -1.93
UBE4A-203ENST00000545354 HIVEP2P31629 2446 aa2.96□□□□□ -1.94
UBE4A-203ENST00000545354 SVEP1Q4LDE5 3571 aa2.96□□□□□ -1.94
UBE4A-203ENST00000545354 SONP18583 2426 aaKnown RBP2.95□□□□□ -1.94
UBE4A-203ENST00000545354 CLPSL2Q6UWE3 100 aa2.94□□□□□ -1.94
UBE4A-203ENST00000545354 LY6EQ16553 131 aa2.93□□□□□ -1.94
UBE4A-203ENST00000545354 MGAM2Q2M2H8 2515 aa2.93□□□□□ -1.94
UBE4A-203ENST00000545354 HTN1P15515 57 aa2.93□□□□□ -1.94
UBE4A-203ENST00000545354 IGFL1Q6UW32 110 aa2.93□□□□□ -1.94
UBE4A-203ENST00000545354 ABCA1O95477 2261 aa2.93□□□□□ -1.94
UBE4A-203ENST00000545354 H3BUX3 64 aa2.92□□□□□ -1.94
UBE4A-203ENST00000545354 DEFB1P60022 68 aa2.92□□□□□ -1.94
UBE4A-203ENST00000545354 KRTAP24-1Q3LI83 254 aa2.92□□□□□ -1.94
UBE4A-203ENST00000545354 KMT2CQ8NEZ4 4911 aaKnown RBP2.92□□□□□ -1.94
UBE4A-203ENST00000545354 UNQ6190/PRO20217Q6UXQ8 127 aa2.92□□□□□ -1.94
UBE4A-203ENST00000545354 RYR3Q15413 4870 aa2.92□□□□□ -1.94
UBE4A-203ENST00000545354 GIG44P09565 113 aaPredicted RBP2.91□□□□□ -1.94
UBE4A-203ENST00000545354 PLAC4Q8WY50 150 aa2.91□□□□□ -1.94
UBE4A-203ENST00000545354 SPRR1AP35321 89 aa2.9□□□□□ -1.94
UBE4A-203ENST00000545354 TENM1Q9UKZ4 2725 aa2.9□□□□□ -1.94
UBE4A-203ENST00000545354 PRKDCP78527 4128 aaKnown RBP2.89□□□□□ -1.95
UBE4A-203ENST00000545354 G3V318 75 aa2.89□□□□□ -1.95
UBE4A-203ENST00000545354 ROS1P08922 2347 aa2.89□□□□□ -1.95
UBE4A-203ENST00000545354 H0YAA0 97 aa2.89□□□□□ -1.95
UBE4A-203ENST00000545354 R4GN34 69 aa2.89□□□□□ -1.95
UBE4A-203ENST00000545354 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.89□□□□□ -1.951e-7■■■■■ 35.5
UBE4A-203ENST00000545354 TRRAPQ9Y4A5 3859 aa2.87□□□□□ -1.95
UBE4A-203ENST00000545354 INE1O15225 51 aa2.87□□□□□ -1.95
UBE4A-203ENST00000545354 KRTAP1-1Q07627 177 aa2.87□□□□□ -1.95
UBE4A-203ENST00000545354 Q6ZSA8 131 aa2.87□□□□□ -1.95
UBE4A-203ENST00000545354 WNK2Q9Y3S1 2297 aa2.86□□□□□ -1.95
UBE4A-203ENST00000545354 A0A1W2PPR1 153 aa2.86□□□□□ -1.95
UBE4A-203ENST00000545354 H1FX-AS1Q4G0G2 97 aa2.86□□□□□ -1.95
UBE4A-203ENST00000545354 TPRXLQ17RH7 258 aa2.86□□□□□ -1.95
UBE4A-203ENST00000545354 ALMS1Q8TCU4 4167 aa2.85□□□□□ -1.95
UBE4A-203ENST00000545354 WNK1Q9H4A3 2382 aa2.84□□□□□ -1.95
UBE4A-203ENST00000545354 SPRR1BP22528 89 aa2.84□□□□□ -1.95
UBE4A-203ENST00000545354 RPL37P61927 97 aaKnown RBP2.84□□□□□ -1.95
UBE4A-203ENST00000545354 KRTAP13-3Q3SY46 172 aa2.84□□□□□ -1.96
UBE4A-203ENST00000545354 MAPK1IP1LQ8NDC0 245 aa2.84□□□□□ -1.96
UBE4A-203ENST00000545354 VWFP04275 2813 aa2.84□□□□□ -1.96
UBE4A-203ENST00000545354 IGKV2D-30A0A075B6S6 120 aa2.82□□□□□ -1.96
UBE4A-203ENST00000545354 C10orf99Q6UWK7 81 aa2.82□□□□□ -1.96
UBE4A-203ENST00000545354 BIRC6Q9NR09 4857 aa2.82□□□□□ -1.96
UBE4A-203ENST00000545354 EPPK1P58107 5090 aaKnown RBP2.81□□□□□ -1.96
UBE4A-203ENST00000545354 IGKV2-30P06310 120 aa2.81□□□□□ -1.96
UBE4A-203ENST00000545354 TYMSOSQ8TAI1 123 aa2.81□□□□□ -1.96
UBE4A-203ENST00000545354 C14orf177Q52M58 125 aa2.81□□□□□ -1.96
UBE4A-203ENST00000545354 NOP10Q9NPE3 64 aaKnown RBP2.81□□□□□ -1.96
UBE4A-203ENST00000545354 PRO0255Q9UI72 69 aa2.81□□□□□ -1.96
UBE4A-203ENST00000545354 DEFB130BP0DP73 79 aa2.8□□□□□ -1.96
UBE4A-203ENST00000545354 DEFB130AP0DP74 79 aa2.8□□□□□ -1.96
UBE4A-203ENST00000545354 UBE2DNLQ8IWF7 75 aa2.8□□□□□ -1.96
UBE4A-203ENST00000545354 SPACA4Q8TDM5 124 aa2.79□□□□□ -1.96
UBE4A-203ENST00000545354 CMYA5Q8N3K9 4069 aa2.79□□□□□ -1.96
UBE4A-203ENST00000545354 Q6ZRN7 208 aaPredicted RBP2.78□□□□□ -1.96
UBE4A-203ENST00000545354 LELP1Q5T871 98 aa2.77□□□□□ -1.97
UBE4A-203ENST00000545354 TENM3Q9P273 2699 aa2.76□□□□□ -1.97
UBE4A-203ENST00000545354 LYNX1P0DP58 116 aa2.75□□□□□ -1.97
UBE4A-203ENST00000545354 PRLHP81277 87 aa2.74□□□□□ -1.97
UBE4A-203ENST00000545354 RYR2Q92736 4967 aa2.74□□□□□ -1.97
UBE4A-203ENST00000545354 HYDINQ4G0P3 5121 aa2.74□□□□□ -1.97
UBE4A-203ENST00000545354 PCLOQ9Y6V0 5065 aa2.73□□□□□ -1.97
UBE4A-203ENST00000545354 RYR1P21817 5038 aa2.73□□□□□ -1.97
UBE4A-203ENST00000545354 K7EIL1 84 aa2.72□□□□□ -1.97
UBE4A-203ENST00000545354 BRD3OSQ6XYD6 125 aa2.72□□□□□ -1.97
UBE4A-203ENST00000545354 COL7A1Q02388 2944 aa2.71□□□□□ -1.98
UBE4A-203ENST00000545354 SACSQ9NZJ4 4579 aa2.7□□□□□ -1.98
UBE4A-203ENST00000545354 KRTAP12-2P59991 146 aa2.69□□□□□ -1.98
UBE4A-203ENST00000545354 PP632Q6XCG6 107 aa2.69□□□□□ -1.98
UBE4A-203ENST00000545354 TENM2Q9NT68 2774 aa2.69□□□□□ -1.98
UBE4A-203ENST00000545354 DYNC2H1Q8NCM8 4307 aaKnown RBP2.68□□□□□ -1.98
UBE4A-203ENST00000545354 SPINK1P00995 79 aa2.68□□□□□ -1.98
UBE4A-203ENST00000545354 DEFB136Q30KP8 78 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms