RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 Q5XG85 94 aa5.39□□□□□ -1.55
TNFRSF1A-214ENST00000543048 OBSCN-AS1Q96MR7 158 aa5.39□□□□□ -1.55
TNFRSF1A-214ENST00000543048 F8WEM9 126 aa5.38□□□□□ -1.55
TNFRSF1A-214ENST00000543048 A0A0G2JQZ4 141 aa5.37□□□□□ -1.55
TNFRSF1A-214ENST00000543048 A0A1B0GV72 72 aa5.37□□□□□ -1.55
TNFRSF1A-214ENST00000543048 RBM3P98179 157 aaKnown RBP5.36□□□□□ -1.55
TNFRSF1A-214ENST00000543048 C14orf132Q9NPU4 83 aa5.36□□□□□ -1.55
TNFRSF1A-214ENST00000543048 FAT4Q6V0I7 4981 aa5.36□□□□□ -1.55
TNFRSF1A-214ENST00000543048 C1orf195Q5TG92 126 aa5.35□□□□□ -1.55
TNFRSF1A-214ENST00000543048 Q6JHZ5 121 aa5.35□□□□□ -1.55
TNFRSF1A-214ENST00000543048 DSCR8Q96T75 97 aa5.35□□□□□ -1.55
TNFRSF1A-214ENST00000543048 IGLV8-61A0A075B6I0 122 aa5.34□□□□□ -1.55
TNFRSF1A-214ENST00000543048 LOC110117498A0A087WWA1 95 aa5.34□□□□□ -1.55
TNFRSF1A-214ENST00000543048 TRBV7-4A0A0J9YYF1 115 aa5.34□□□□□ -1.55
TNFRSF1A-214ENST00000543048 PDE6GP18545 87 aa5.34□□□□□ -1.55
TNFRSF1A-214ENST00000543048 J3QR89 54 aa5.33□□□□□ -1.56
TNFRSF1A-214ENST00000543048 C9orf92A6NGG3 77 aa5.32□□□□□ -1.56
TNFRSF1A-214ENST00000543048 IGFL1Q6UW32 110 aa5.32□□□□□ -1.56
TNFRSF1A-214ENST00000543048 Q6ZQT0 140 aa5.32□□□□□ -1.56
TNFRSF1A-214ENST00000543048 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
TNFRSF1A-214ENST00000543048 TRBV7-7A0A0K0K1E9 115 aa5.3□□□□□ -1.56
TNFRSF1A-214ENST00000543048 K7ERU9 68 aa5.3□□□□□ -1.56
TNFRSF1A-214ENST00000543048 CCKP06307 115 aa5.3□□□□□ -1.56
TNFRSF1A-214ENST00000543048 FAM240AA0A1B0GVK7 77 aa5.29□□□□□ -1.56
TNFRSF1A-214ENST00000543048 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
TNFRSF1A-214ENST00000543048 VPS25Q9BRG1 176 aa5.28□□□□□ -1.56
TNFRSF1A-214ENST00000543048 A0A1W2PNM2 257 aa5.27□□□□□ -1.57
TNFRSF1A-214ENST00000543048 ACYP1P07311 99 aa5.27□□□□□ -1.57
TNFRSF1A-214ENST00000543048 PCOTHQ58A44 107 aa5.27□□□□□ -1.57
TNFRSF1A-214ENST00000543048 A0A1B0GW54 56 aa5.26□□□□□ -1.57
TNFRSF1A-214ENST00000543048 Q6Q795 121 aa5.26□□□□□ -1.57
TNFRSF1A-214ENST00000543048 RPL37P61927 97 aaKnown RBP5.22□□□□□ -1.57
TNFRSF1A-214ENST00000543048 LINC00846Q9NV44 126 aa5.22□□□□□ -1.57
TNFRSF1A-214ENST00000543048 SS18L2Q9UHA2 77 aa5.22□□□□□ -1.57
TNFRSF1A-214ENST00000543048 A0A087WSZ3 146 aa5.21□□□□□ -1.58
TNFRSF1A-214ENST00000543048 UBL5Q9BZL1 73 aa5.21□□□□□ -1.58
TNFRSF1A-214ENST00000543048 Q6ZVQ6 151 aa5.19□□□□□ -1.58
TNFRSF1A-214ENST00000543048 NREPQ16612 68 aa5.17□□□□□ -1.58
TNFRSF1A-214ENST00000543048 ATP5EP2Q5VTU8 51 aa5.16□□□□□ -1.58
TNFRSF1A-214ENST00000543048 LINC00643Q86TS7 51 aa5.16□□□□□ -1.58
TNFRSF1A-214ENST00000543048 Q96NJ1 140 aa5.16□□□□□ -1.58
TNFRSF1A-214ENST00000543048 KRTAP19-2Q3LHN2 52 aa5.15□□□□□ -1.59
TNFRSF1A-214ENST00000543048 ATP11AUNQ6ZP68 121 aa5.15□□□□□ -1.59
TNFRSF1A-214ENST00000543048 Q75L30 129 aa5.15□□□□□ -1.59
TNFRSF1A-214ENST00000543048 BPY2O14599 106 aa5.13□□□□□ -1.59
TNFRSF1A-214ENST00000543048 LINC00472Q9H8W2 130 aa5.13□□□□□ -1.59
TNFRSF1A-214ENST00000543048 J3KT08 172 aa5.12□□□□□ -1.59
TNFRSF1A-214ENST00000543048 CXCL6P80162 114 aa5.12□□□□□ -1.59
TNFRSF1A-214ENST00000543048 SIGMAR1Q99720 223 aa5.12□□□□□ -1.59
TNFRSF1A-214ENST00000543048 IGKV3D-7A0A0C4DH55 119 aa5.11□□□□□ -1.59
TNFRSF1A-214ENST00000543048 A8MUU9 505 aa5.1□□□□□ -1.59
TNFRSF1A-214ENST00000543048 MT-ATP8P03928 68 aa5.1□□□□□ -1.59
TNFRSF1A-214ENST00000543048 IGKV4-1P06312 121 aa5.1□□□□□ -1.59
TNFRSF1A-214ENST00000543048 FLGP20930 4061 aaPredicted RBP5.1□□□□□ -1.59
TNFRSF1A-214ENST00000543048 C20orf166-AS1Q96NR2 134 aa5.1□□□□□ -1.59
TNFRSF1A-214ENST00000543048 DSCR10P59022 87 aa5.09□□□□□ -1.59
TNFRSF1A-214ENST00000543048 LINC00313P59037 77 aa5.09□□□□□ -1.59
TNFRSF1A-214ENST00000543048 MT1HP80294 61 aa5.09□□□□□ -1.59
TNFRSF1A-214ENST00000543048 DEFB116Q30KQ4 102 aa5.09□□□□□ -1.59
TNFRSF1A-214ENST00000543048 A8MWP4 228 aa5.08□□□□□ -1.6
TNFRSF1A-214ENST00000543048 COX6B2Q6YFQ2 88 aa5.08□□□□□ -1.6
TNFRSF1A-214ENST00000543048 IMUPQ9GZP8 106 aa5.07□□□□□ -1.6
TNFRSF1A-214ENST00000543048 K7EQZ3 153 aa5.06□□□□□ -1.6
TNFRSF1A-214ENST00000543048 NDUFB1O75438 58 aa5.06□□□□□ -1.6
TNFRSF1A-214ENST00000543048 HIST1H4AP62805 103 aaKnown RBP5.06□□□□□ -1.6
TNFRSF1A-214ENST00000543048 Q8N9L7 120 aa5.06□□□□□ -1.6
TNFRSF1A-214ENST00000543048 A0A1B0GVX0 72 aa5.04□□□□□ -1.6
TNFRSF1A-214ENST00000543048 PRR15Q8IV56 129 aa5.04□□□□□ -1.6
TNFRSF1A-214ENST00000543048 IGHV6-1A0A0B4J1U7 121 aa5.03□□□□□ -1.6
TNFRSF1A-214ENST00000543048 KRTAP16-1A8MUX0 517 aa5.03□□□□□ -1.6
TNFRSF1A-214ENST00000543048 M0R2T5 61 aa5.03□□□□□ -1.6
TNFRSF1A-214ENST00000543048 NOTCH2NLQ7Z3S9 236 aa5.03□□□□□ -1.6
TNFRSF1A-214ENST00000543048 A0A087WVE0 104 aa5.01□□□□□ -1.61
TNFRSF1A-214ENST00000543048 C8orf87E5RJ46 101 aa5.01□□□□□ -1.61
TNFRSF1A-214ENST00000543048 HCG22E2RYF7 251 aa5□□□□□ -1.61
TNFRSF1A-214ENST00000543048 KRTAP10-6P60371 365 aaPredicted RBP5□□□□□ -1.61
TNFRSF1A-214ENST00000543048 MMP24-AS1A0A0U1RRL7 71 aa4.99□□□□□ -1.61
TNFRSF1A-214ENST00000543048 C8orf17Q9NRJ1 99 aa4.99□□□□□ -1.61
TNFRSF1A-214ENST00000543048 FAM236AA0A1B0GUQ0 79 aa4.98□□□□□ -1.61
TNFRSF1A-214ENST00000543048 FAM236BA0A1B0GV22 79 aa4.98□□□□□ -1.61
TNFRSF1A-214ENST00000543048 CASC2Q6XLA1 102 aa4.97□□□□□ -1.61
TNFRSF1A-214ENST00000543048 WFDC13Q8IUB5 93 aa4.97□□□□□ -1.61
TNFRSF1A-214ENST00000543048 hDV103S1A0JD37 113 aa4.96□□□□□ -1.62
TNFRSF1A-214ENST00000543048 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
TNFRSF1A-214ENST00000543048 SCGB1A1P11684 91 aa4.95□□□□□ -1.62
TNFRSF1A-214ENST00000543048 TMEM254Q8TBM7 123 aa4.95□□□□□ -1.62
TNFRSF1A-214ENST00000543048 MRPL34Q9BQ48 92 aaKnown RBP4.93□□□□□ -1.62
TNFRSF1A-214ENST00000543048 ATOX1O00244 68 aa4.92□□□□□ -1.62
TNFRSF1A-214ENST00000543048 ZCCHC13Q8WW36 166 aaKnown RBP4.92□□□□□ -1.62
TNFRSF1A-214ENST00000543048 RBM12B-AS1Q9P1G2 102 aa4.92□□□□□ -1.62
TNFRSF1A-214ENST00000543048 FAM236DA0A1B0GTK5 79 aa4.91□□□□□ -1.62
TNFRSF1A-214ENST00000543048 FAM236CP0DP71 79 aa4.91□□□□□ -1.62
TNFRSF1A-214ENST00000543048 HRES1P13985 223 aa4.91□□□□□ -1.62
TNFRSF1A-214ENST00000543048 Q8N9P0 234 aaPredicted RBP4.91□□□□□ -1.62
TNFRSF1A-214ENST00000543048 MPLKIPQ8TAP9 179 aa4.9□□□□□ -1.63
TNFRSF1A-214ENST00000543048 SMIM20Q8N5G0 67 aa4.89□□□□□ -1.63
TNFRSF1A-214ENST00000543048 NDUFS5O43920 106 aa4.88□□□□□ -1.63
TNFRSF1A-214ENST00000543048 OCR1Q9BZK8 76 aa4.88□□□□□ -1.63
TNFRSF1A-214ENST00000543048 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
TNFRSF1A-214ENST00000543048 SPINK7P58062 85 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms