RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 RBM12B-AS1Q9P1G2 102 aa8.92□□□□□ -0.98
DDX55-209ENST00000542286 COA5Q86WW8 74 aa8.91□□□□□ -0.98
DDX55-209ENST00000542286 IGLV5-52A0A0A0MRZ9 124 aa8.9□□□□□ -0.98
DDX55-209ENST00000542286 LINC00472Q9H8W2 130 aa8.9□□□□□ -0.98
DDX55-209ENST00000542286 LRP1BQ9NZR2 4599 aa8.9□□□□□ -0.99
DDX55-209ENST00000542286 LOC101927531A0A1B0GV80 90 aa8.9□□□□□ -0.99
DDX55-209ENST00000542286 MOBPQ13875 183 aa8.89□□□□□ -0.99
DDX55-209ENST00000542286 C1orf134Q5TEV5 83 aa8.87□□□□□ -0.99
DDX55-209ENST00000542286 A6NN06 94 aa8.86□□□□□ -0.99
DDX55-209ENST00000542286 A8MWP4 228 aa8.86□□□□□ -0.99
DDX55-209ENST00000542286 KRTAP10-2P60368 255 aa8.86□□□□□ -0.99
DDX55-209ENST00000542286 IGLV7-46A0A075B6I9 117 aa8.85□□□□□ -0.99
DDX55-209ENST00000542286 NDUFS5O43920 106 aa8.84□□□□□ -0.99
DDX55-209ENST00000542286 WWC2-AS2Q96NR7 200 aa8.84□□□□□ -0.99
DDX55-209ENST00000542286 CDC42SE1Q9NRR8 79 aa8.84□□□□□ -1
DDX55-209ENST00000542286 FAT2Q9NYQ8 4349 aa8.83□□□□□ -1
DDX55-209ENST00000542286 PCOTHQ58A44 107 aa8.83□□□□□ -1
DDX55-209ENST00000542286 Q96NJ1 140 aa8.83□□□□□ -1
DDX55-209ENST00000542286 PKD1P98161 4303 aa8.82□□□□□ -1
DDX55-209ENST00000542286 PLAC8Q9NZF1 115 aa8.82□□□□□ -1
DDX55-209ENST00000542286 SPAG11AQ6PDA7 123 aa8.82□□□□□ -1
DDX55-209ENST00000542286 ZNF861PO60384 105 aa8.8□□□□□ -1
DDX55-209ENST00000542286 MMP24-AS1A0A0U1RRL7 71 aa8.79□□□□□ -1
DDX55-209ENST00000542286 A0A087X002 238 aa8.78□□□□□ -1
DDX55-209ENST00000542286 LINC00483Q53H64 154 aa8.78□□□□□ -1
DDX55-209ENST00000542286 NOTCH2NLQ7Z3S9 236 aa8.78□□□□□ -1
DDX55-209ENST00000542286 SPINK6Q6UWN8 80 aa8.78□□□□□ -1
DDX55-209ENST00000542286 LINC01558Q9Y6Z2 57 aa8.78□□□□□ -1
DDX55-209ENST00000542286 IGHV6-1A0A0B4J1U7 121 aa8.78□□□□□ -1
DDX55-209ENST00000542286 PKHD1P08F94 4074 aa8.77□□□□□ -1.01
DDX55-209ENST00000542286 CIRBP-AS1Q8TBR5 109 aa8.77□□□□□ -1.01
DDX55-209ENST00000542286 VPS13BQ7Z7G8 4022 aa8.75□□□□□ -1.01
DDX55-209ENST00000542286 C7orf65Q6ZTY9 151 aa8.75□□□□□ -1.01
DDX55-209ENST00000542286 IGLV7-43P04211 117 aa8.74□□□□□ -1.01
DDX55-209ENST00000542286 SPINK7P58062 85 aa8.73□□□□□ -1.01
DDX55-209ENST00000542286 ZNF706Q9Y5V0 76 aaPredicted RBP8.71□□□□□ -1.01
DDX55-209ENST00000542286 KRTAP10-1P60331 282 aa8.7□□□□□ -1.02
DDX55-209ENST00000542286 TP53AIP1Q9HCN2 124 aa8.69□□□□□ -1.02
DDX55-209ENST00000542286 HRES1P13985 223 aa8.69□□□□□ -1.02
DDX55-209ENST00000542286 C8orf17Q9NRJ1 99 aa8.69□□□□□ -1.02
DDX55-209ENST00000542286 SACSQ9NZJ4 4579 aa8.66□□□□□ -1.02
DDX55-209ENST00000542286 ASB16-AS1Q495Z4 193 aa8.66□□□□□ -1.02
DDX55-209ENST00000542286 A0A1B0GVX0 72 aa8.65□□□□□ -1.02
DDX55-209ENST00000542286 CDK2AP2O75956 126 aa8.63□□□□□ -1.03
DDX55-209ENST00000542286 KRTAP13-2Q52LG2 175 aa8.6□□□□□ -1.03
DDX55-209ENST00000542286 PRR26Q8N8Z3 221 aa8.59□□□□□ -1.03
DDX55-209ENST00000542286 FAT1Q14517 4588 aa8.58□□□□□ -1.04
DDX55-209ENST00000542286 RETNLBQ9BQ08 111 aa8.58□□□□□ -1.04
DDX55-209ENST00000542286 LINC00313P59037 77 aa8.57□□□□□ -1.04
DDX55-209ENST00000542286 MRPL34Q9BQ48 92 aaKnown RBP8.57□□□□□ -1.04
DDX55-209ENST00000542286 Q5W150 140 aa8.56□□□□□ -1.04
DDX55-209ENST00000542286 PRAC1Q96KF2 57 aa8.55□□□□□ -1.04
DDX55-209ENST00000542286 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
DDX55-209ENST00000542286 C8orf87E5RJ46 101 aa8.54□□□□□ -1.04
DDX55-209ENST00000542286 Q6ZSA8 131 aa8.53□□□□□ -1.04
DDX55-209ENST00000542286 ADM2Q7Z4H4 148 aa8.5□□□□□ -1.05
DDX55-209ENST00000542286 KRTAP21-3Q3LHN1 58 aa8.5□□□□□ -1.05
DDX55-209ENST00000542286 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
DDX55-209ENST00000542286 SMR3BP02814 79 aaPredicted RBP8.48□□□□□ -1.05
DDX55-209ENST00000542286 SSBP3-AS1Q7Z2R9 100 aa8.48□□□□□ -1.05
DDX55-209ENST00000542286 KMT2CQ8NEZ4 4911 aaKnown RBP8.47□□□□□ -1.05
DDX55-209ENST00000542286 ACYP2P14621 99 aa8.45□□□□□ -1.06
DDX55-209ENST00000542286 PLA2G1BP04054 148 aaKnown RBP8.44□□□□□ -1.06
DDX55-209ENST00000542286 C4orf48Q5BLP8 95 aa8.43□□□□□ -1.06
DDX55-209ENST00000542286 KRTAP13-3Q3SY46 172 aa8.4□□□□□ -1.06
DDX55-209ENST00000542286 LINC01554Q52M75 96 aa8.39□□□□□ -1.07
DDX55-209ENST00000542286 APOBP04114 4563 aaKnown RBP8.39□□□□□ -1.07
DDX55-209ENST00000542286 A0A1B0GU69 56 aa8.39□□□□□ -1.07
DDX55-209ENST00000542286 SPATA8Q6RVD6 105 aa8.36□□□□□ -1.07
DDX55-209ENST00000542286 TYMSOSQ8TAI1 123 aa8.36□□□□□ -1.07
DDX55-209ENST00000542286 DMAC1Q96GE9 116 aa8.35□□□□□ -1.07
DDX55-209ENST00000542286 RYR2Q92736 4967 aa8.35□□□□□ -1.07
DDX55-209ENST00000542286 MIR22HGQ0VDD5 57 aa8.32□□□□□ -1.08
DDX55-209ENST00000542286 KRTAP16-1A8MUX0 517 aa8.31□□□□□ -1.08
DDX55-209ENST00000542286 UQCR11O14957 56 aa8.29□□□□□ -1.08
DDX55-209ENST00000542286 IGKV2D-30A0A075B6S6 120 aa8.28□□□□□ -1.08
DDX55-209ENST00000542286 IGKV2-30P06310 120 aa8.28□□□□□ -1.08
DDX55-209ENST00000542286 LRP1Q07954 4544 aaKnown RBP8.27□□□□□ -1.09
DDX55-209ENST00000542286 FAM229AH3BQW9 127 aa8.24□□□□□ -1.09
DDX55-209ENST00000542286 H3BS24 57 aa8.23□□□□□ -1.09
DDX55-209ENST00000542286 CSAG1Q6PB30 78 aa8.23□□□□□ -1.09
DDX55-209ENST00000542286 LINC00304Q8N9R0 145 aa8.22□□□□□ -1.09
DDX55-209ENST00000542286 PKHD1L1Q86WI1 4243 aa8.22□□□□□ -1.09
DDX55-209ENST00000542286 C9orf92A6NGG3 77 aa8.22□□□□□ -1.09
DDX55-209ENST00000542286 SPINK1P00995 79 aa8.2□□□□□ -1.1
DDX55-209ENST00000542286 A0A1B0GVY2 172 aa8.19□□□□□ -1.1
DDX55-209ENST00000542286 RYR3Q15413 4870 aa8.19□□□□□ -1.1
DDX55-209ENST00000542286 FLG2Q5D862 2391 aaPredicted RBP8.16□□□□□ -1.1
DDX55-209ENST00000542286 MYCBP2O75592 4640 aa8.15□□□□□ -1.1
DDX55-209ENST00000542286 KRTAP10-4P60372 401 aaPredicted RBP8.15□□□□□ -1.1
DDX55-209ENST00000542286 Q8N1X5 172 aa8.12□□□□□ -1.11
DDX55-209ENST00000542286 DMBT1Q9UGM3 2413 aaPredicted RBP8.1□□□□□ -1.11
DDX55-209ENST00000542286 HSPG2P98160 4391 aa8.08□□□□□ -1.12
DDX55-209ENST00000542286 KIAA1109Q2LD37 5005 aa8.04□□□□□ -1.12
DDX55-209ENST00000542286 FAT3Q8TDW7 4589 aa8.04□□□□□ -1.12
DDX55-209ENST00000542286 TNXBP22105 4242 aa8.03□□□□□ -1.12
DDX55-209ENST00000542286 KRTAP17-1Q9BYP8 105 aa7.99□□□□□ -1.13
DDX55-209ENST00000542286 RYR1P21817 5038 aa7.96□□□□□ -1.14
DDX55-209ENST00000542286 RPS29P62273 56 aaKnown RBP7.95□□□□□ -1.14
DDX55-209ENST00000542286 A8MUU9 505 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms