RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 HRCT1Q6UXD1 115 aa3.24□□□□□ -1.89
CPSF7-220ENST00000541963 DSCR8Q96T75 97 aa3.24□□□□□ -1.89
CPSF7-220ENST00000541963 HERC1Q15751 4861 aa3.24□□□□□ -1.89
CPSF7-220ENST00000541963 ZNF861PO60384 105 aa3.23□□□□□ -1.89
CPSF7-220ENST00000541963 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
CPSF7-220ENST00000541963 C1orf195Q5TG92 126 aa3.23□□□□□ -1.89
CPSF7-220ENST00000541963 ZNF625Q96I27 306 aaPredicted RBP3.23□□□□□ -1.89
CPSF7-220ENST00000541963 LINC00167Q96N53 147 aa3.23□□□□□ -1.89
CPSF7-220ENST00000541963 LRP1Q07954 4544 aaKnown RBP3.23□□□□□ -1.89
CPSF7-220ENST00000541963 LOC110117498A0A087WWA1 95 aa3.22□□□□□ -1.89
CPSF7-220ENST00000541963 TRBV7-6A0A0J9YX20 115 aa3.22□□□□□ -1.89
CPSF7-220ENST00000541963 A0A1B0GW54 56 aa3.22□□□□□ -1.89
CPSF7-220ENST00000541963 H7BZZ5 65 aa3.22□□□□□ -1.89
CPSF7-220ENST00000541963 MT1HL1P0DM35 61 aa3.22□□□□□ -1.89
CPSF7-220ENST00000541963 KRTAP10-8P60410 259 aa3.22□□□□□ -1.89
CPSF7-220ENST00000541963 CD164Q04900 197 aa3.22□□□□□ -1.89
CPSF7-220ENST00000541963 C4orf26Q17RF5 130 aa3.22□□□□□ -1.89
CPSF7-220ENST00000541963 FAM19A1Q7Z5A9 133 aa3.22□□□□□ -1.89
CPSF7-220ENST00000541963 SND1-IT1Q9HBX3 110 aa3.22□□□□□ -1.89
CPSF7-220ENST00000541963 LINC00846Q9NV44 126 aa3.22□□□□□ -1.89
CPSF7-220ENST00000541963 IGLV1-50A0A075B6I6 118 aa3.21□□□□□ -1.9
CPSF7-220ENST00000541963 UBE2AP49459 152 aa3.21□□□□□ -1.9
CPSF7-220ENST00000541963 KRTAP11-1Q8IUC1 163 aa3.21□□□□□ -1.9
CPSF7-220ENST00000541963 C20orf197Q8N268 126 aa3.21□□□□□ -1.9
CPSF7-220ENST00000541963 M0R378 163 aa3.2□□□□□ -1.9
CPSF7-220ENST00000541963 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
CPSF7-220ENST00000541963 PRR15Q8IV56 129 aa3.2□□□□□ -1.9
CPSF7-220ENST00000541963 C14orf132Q9NPU4 83 aa3.2□□□□□ -1.9
CPSF7-220ENST00000541963 ANAPC11Q9NYG5 84 aa3.2□□□□□ -1.9
CPSF7-220ENST00000541963 DMBT1Q9UGM3 2413 aaPredicted RBP3.19□□□□□ -1.9
CPSF7-220ENST00000541963 IGKV2-28A0A075B6P5 120 aa3.19□□□□□ -1.9
CPSF7-220ENST00000541963 IGKV3D-7A0A0C4DH55 119 aa3.19□□□□□ -1.9
CPSF7-220ENST00000541963 IGKV2D-28P01615 120 aa3.19□□□□□ -1.9
CPSF7-220ENST00000541963 RBM3P98179 157 aaKnown RBP3.19□□□□□ -1.9
CPSF7-220ENST00000541963 MIR7-3HGQ8N6C7 128 aa3.19□□□□□ -1.9
CPSF7-220ENST00000541963 A0A0U1RQV1 116 aa3.18□□□□□ -1.9
CPSF7-220ENST00000541963 SMIM11BQ8TCY0 68 aa3.18□□□□□ -1.9
CPSF7-220ENST00000541963 CAMK2N1Q7Z7J9 78 aa3.17□□□□□ -1.9
CPSF7-220ENST00000541963 BRK1Q8WUW1 75 aa3.17□□□□□ -1.9
CPSF7-220ENST00000541963 TNXBP22105 4242 aa3.17□□□□□ -1.9
CPSF7-220ENST00000541963 TRAV23DV6A0A075B6W5 121 aa3.16□□□□□ -1.9
CPSF7-220ENST00000541963 A0A087WVE0 104 aa3.16□□□□□ -1.9
CPSF7-220ENST00000541963 TRBV7-4A0A0J9YYF1 115 aa3.16□□□□□ -1.9
CPSF7-220ENST00000541963 F8WEM9 126 aa3.16□□□□□ -1.9
CPSF7-220ENST00000541963 KRTAP4-16G5E9R7 235 aaPredicted RBP3.16□□□□□ -1.9
CPSF7-220ENST00000541963 NCR3O14931 201 aa3.16□□□□□ -1.9
CPSF7-220ENST00000541963 NDUFB1O75438 58 aa3.16□□□□□ -1.9
CPSF7-220ENST00000541963 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
CPSF7-220ENST00000541963 FAM229BQ4G0N7 80 aa3.16□□□□□ -1.9
CPSF7-220ENST00000541963 SOSTDC1Q6X4U4 206 aa3.16□□□□□ -1.9
CPSF7-220ENST00000541963 LINC00337Q8N6G1 96 aa3.16□□□□□ -1.9
CPSF7-220ENST00000541963 KCNQ1DNQ9H478 68 aa3.16□□□□□ -1.9
CPSF7-220ENST00000541963 ZNF706Q9Y5V0 76 aaPredicted RBP3.16□□□□□ -1.9
CPSF7-220ENST00000541963 ETDCA0A1B0GVM5 59 aa3.15□□□□□ -1.91
CPSF7-220ENST00000541963 PRLHP81277 87 aa3.15□□□□□ -1.91
CPSF7-220ENST00000541963 Q6ZQT0 140 aa3.15□□□□□ -1.91
CPSF7-220ENST00000541963 KRTAP13-1Q8IUC0 172 aa3.15□□□□□ -1.91
CPSF7-220ENST00000541963 TMEM254Q8TBM7 123 aa3.15□□□□□ -1.91
CPSF7-220ENST00000541963 HIGD2AQ9BW72 106 aa3.15□□□□□ -1.91
CPSF7-220ENST00000541963 CYSTM1Q9H1C7 97 aa3.15□□□□□ -1.91
CPSF7-220ENST00000541963 HMCN2Q8NDA2 5059 aa3.15□□□□□ -1.91
CPSF7-220ENST00000541963 Q1T7F1 81 aa3.14□□□□□ -1.91
CPSF7-220ENST00000541963 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.14□□□□□ -1.91
CPSF7-220ENST00000541963 FP248Q71RG6 208 aaPredicted RBP3.14□□□□□ -1.91
CPSF7-220ENST00000541963 Q8NDZ9 215 aa3.14□□□□□ -1.91
CPSF7-220ENST00000541963 SPRR1AP35321 89 aa3.13□□□□□ -1.91
CPSF7-220ENST00000541963 NREPQ16612 68 aa3.13□□□□□ -1.91
CPSF7-220ENST00000541963 BPY2O14599 106 aa3.12□□□□□ -1.91
CPSF7-220ENST00000541963 SPAG11AQ6PDA7 123 aa3.12□□□□□ -1.91
CPSF7-220ENST00000541963 LINC00575Q6W349 94 aa3.12□□□□□ -1.91
CPSF7-220ENST00000541963 NDUFS5O43920 106 aa3.11□□□□□ -1.91
CPSF7-220ENST00000541963 IGLV6-57P01721 117 aa3.11□□□□□ -1.91
CPSF7-220ENST00000541963 COX7BP24311 80 aa3.11□□□□□ -1.91
CPSF7-220ENST00000541963 ELOF1P60002 83 aaKnown RBP3.11□□□□□ -1.91
CPSF7-220ENST00000541963 LINC00304Q8N9R0 145 aa3.11□□□□□ -1.91
CPSF7-220ENST00000541963 SPRR4Q96PI1 79 aa3.11□□□□□ -1.91
CPSF7-220ENST00000541963 CYP4F30PQ9H0H9 118 aa3.11□□□□□ -1.91
CPSF7-220ENST00000541963 H3BPC8 53 aa3.1□□□□□ -1.91
CPSF7-220ENST00000541963 ZNF73O43830 326 aaPredicted RBP3.1□□□□□ -1.91
CPSF7-220ENST00000541963 Q6ZRX8 168 aa3.1□□□□□ -1.91
CPSF7-220ENST00000541963 LIMD2Q9BT23 127 aa3.1□□□□□ -1.91
CPSF7-220ENST00000541963 KRTAP13-2Q52LG2 175 aa3.09□□□□□ -1.91
CPSF7-220ENST00000541963 SSBP3-AS1Q7Z2R9 100 aa3.09□□□□□ -1.91
CPSF7-220ENST00000541963 hDV103S1A0JD37 113 aa3.08□□□□□ -1.92
CPSF7-220ENST00000541963 LINC00483Q53H64 154 aa3.08□□□□□ -1.92
CPSF7-220ENST00000541963 SNURFQ9Y675 71 aa3.08□□□□□ -1.92
CPSF7-220ENST00000541963 SPINK1P00995 79 aa3.07□□□□□ -1.92
CPSF7-220ENST00000541963 C6orf99Q4VX62 202 aa3.07□□□□□ -1.92
CPSF7-220ENST00000541963 KTN1-AS1Q86SY8 53 aa3.07□□□□□ -1.92
CPSF7-220ENST00000541963 Q8N9L7 120 aa3.07□□□□□ -1.92
CPSF7-220ENST00000541963 SPANXA2-OT1Q8N9U9 137 aa3.07□□□□□ -1.92
CPSF7-220ENST00000541963 Q9BRP9 147 aa3.07□□□□□ -1.92
CPSF7-220ENST00000541963 UBR4Q5T4S7 5183 aa3.07□□□□□ -1.92
CPSF7-220ENST00000541963 ATP11AUNQ6ZP68 121 aa3.06□□□□□ -1.92
CPSF7-220ENST00000541963 MOBPQ13875 183 aa3.05□□□□□ -1.92
CPSF7-220ENST00000541963 Q6ZQY7 126 aa3.05□□□□□ -1.92
CPSF7-220ENST00000541963 LRP2P98164 4655 aa3.05□□□□□ -1.92
CPSF7-220ENST00000541963 IGKV4-1P06312 121 aa3.04□□□□□ -1.92
CPSF7-220ENST00000541963 SPRR1BP22528 89 aa3.04□□□□□ -1.92
CPSF7-220ENST00000541963 MP68P56378 58 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms