RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 SYNE2Q8WXH0 6885 aaKnown RBP6.53□□□□□ -1.36
SCARB1-207ENST00000541661 A0A1B0GX51 115 aa6.53□□□□□ -1.36
SCARB1-207ENST00000541661 KRTAP16-1A8MUX0 517 aa6.53□□□□□ -1.36
SCARB1-207ENST00000541661 H3BT86 120 aa6.53□□□□□ -1.36
SCARB1-207ENST00000541661 TEN1Q86WV5 123 aa6.53□□□□□ -1.36
SCARB1-207ENST00000541661 C9JAW5 83 aa6.52□□□□□ -1.37
SCARB1-207ENST00000541661 ETDBQ3ZM63 59 aa6.52□□□□□ -1.37
SCARB1-207ENST00000541661 ANKRD29Q8N6D5 301 aa6.52□□□□□ -1.37
SCARB1-207ENST00000541661 MPLKIPQ8TAP9 179 aa6.52□□□□□ -1.37
SCARB1-207ENST00000541661 FAM236DA0A1B0GTK5 79 aa6.51□□□□□ -1.37
SCARB1-207ENST00000541661 J3QR89 54 aa6.51□□□□□ -1.37
SCARB1-207ENST00000541661 FAM236CP0DP71 79 aa6.51□□□□□ -1.37
SCARB1-207ENST00000541661 KRTAP10-10P60014 251 aa6.51□□□□□ -1.37
SCARB1-207ENST00000541661 DSCR10P59022 87 aa6.5□□□□□ -1.37
SCARB1-207ENST00000541661 A0A087WSZ3 146 aa6.48□□□□□ -1.37
SCARB1-207ENST00000541661 HRES1P13985 223 aa6.48□□□□□ -1.37
SCARB1-207ENST00000541661 MTURNQ8N3F0 131 aa6.48□□□□□ -1.37
SCARB1-207ENST00000541661 FAM218AQ96MZ4 157 aa6.48□□□□□ -1.37
SCARB1-207ENST00000541661 RBM12B-AS1Q9P1G2 102 aa6.48□□□□□ -1.37
SCARB1-207ENST00000541661 NDUFV3P56181 108 aaKnown RBP6.46□□□□□ -1.38
SCARB1-207ENST00000541661 BAALC-AS2P0C853 105 aa6.45□□□□□ -1.38
SCARB1-207ENST00000541661 LINC00313P59037 77 aa6.45□□□□□ -1.38
SCARB1-207ENST00000541661 SNCGO76070 127 aa6.44□□□□□ -1.38
SCARB1-207ENST00000541661 LINC00846Q9NV44 126 aa6.44□□□□□ -1.38
SCARB1-207ENST00000541661 H3BQ85 93 aa6.43□□□□□ -1.38
SCARB1-207ENST00000541661 KRTAP19-6Q3LI70 58 aa6.43□□□□□ -1.38
SCARB1-207ENST00000541661 NOTCH2NLQ7Z3S9 236 aa6.43□□□□□ -1.38
SCARB1-207ENST00000541661 DNAL4O96015 105 aa6.42□□□□□ -1.38
SCARB1-207ENST00000541661 SIGMAR1Q99720 223 aa6.42□□□□□ -1.38
SCARB1-207ENST00000541661 A0A1W2PNM2 257 aa6.4□□□□□ -1.38
SCARB1-207ENST00000541661 ORMDL1Q9P0S3 153 aa6.4□□□□□ -1.38
SCARB1-207ENST00000541661 TMEM256-PLSCR3K7ERE1 68 aa6.39□□□□□ -1.39
SCARB1-207ENST00000541661 VPS25Q9BRG1 176 aa6.39□□□□□ -1.39
SCARB1-207ENST00000541661 FAM240AA0A1B0GVK7 77 aa6.38□□□□□ -1.39
SCARB1-207ENST00000541661 GHRHP01286 108 aa6.38□□□□□ -1.39
SCARB1-207ENST00000541661 IGKV4-1P06312 121 aa6.38□□□□□ -1.39
SCARB1-207ENST00000541661 ACYP1P07311 99 aa6.36□□□□□ -1.39
SCARB1-207ENST00000541661 TRBV7-4A0A0J9YYF1 115 aa6.35□□□□□ -1.39
SCARB1-207ENST00000541661 JMJD7-PLA2G4BH0Y9G9 81 aa6.35□□□□□ -1.39
SCARB1-207ENST00000541661 LINC00472Q9H8W2 130 aa6.34□□□□□ -1.39
SCARB1-207ENST00000541661 KRTAP6-3Q3LI67 103 aa6.33□□□□□ -1.4
SCARB1-207ENST00000541661 IGHV6-1A0A0B4J1U7 121 aa6.31□□□□□ -1.4
SCARB1-207ENST00000541661 DEFB116Q30KQ4 102 aa6.31□□□□□ -1.4
SCARB1-207ENST00000541661 C21orf62-AS1Q17RA5 79 aa6.3□□□□□ -1.4
SCARB1-207ENST00000541661 A8MWP4 228 aa6.29□□□□□ -1.4
SCARB1-207ENST00000541661 PDE6GP18545 87 aa6.29□□□□□ -1.4
SCARB1-207ENST00000541661 LOC110117498A0A087WWA1 95 aa6.28□□□□□ -1.4
SCARB1-207ENST00000541661 SPINK7P58062 85 aa6.28□□□□□ -1.4
SCARB1-207ENST00000541661 C8orf87E5RJ46 101 aa6.27□□□□□ -1.41
SCARB1-207ENST00000541661 CCKP06307 115 aa6.27□□□□□ -1.41
SCARB1-207ENST00000541661 SCGB1A1P11684 91 aa6.27□□□□□ -1.41
SCARB1-207ENST00000541661 RBM3P98179 157 aaKnown RBP6.27□□□□□ -1.41
SCARB1-207ENST00000541661 ZCCHC13Q8WW36 166 aaKnown RBP6.27□□□□□ -1.41
SCARB1-207ENST00000541661 C14orf132Q9NPU4 83 aa6.26□□□□□ -1.41
SCARB1-207ENST00000541661 A0A1B0GVX0 72 aa6.25□□□□□ -1.41
SCARB1-207ENST00000541661 Q6ZQT0 140 aa6.23□□□□□ -1.41
SCARB1-207ENST00000541661 LINC00643Q86TS7 51 aa6.23□□□□□ -1.41
SCARB1-207ENST00000541661 A0A1B0GV72 72 aa6.22□□□□□ -1.41
SCARB1-207ENST00000541661 MT-ATP8P03928 68 aa6.22□□□□□ -1.41
SCARB1-207ENST00000541661 DSCR8Q96T75 97 aa6.22□□□□□ -1.41
SCARB1-207ENST00000541661 Q8N9P0 234 aaPredicted RBP6.21□□□□□ -1.42
SCARB1-207ENST00000541661 IMUPQ9GZP8 106 aa6.21□□□□□ -1.42
SCARB1-207ENST00000541661 A0A1B0GW54 56 aa6.2□□□□□ -1.42
SCARB1-207ENST00000541661 WFDC13Q8IUB5 93 aa6.19□□□□□ -1.42
SCARB1-207ENST00000541661 J3KT08 172 aa6.17□□□□□ -1.42
SCARB1-207ENST00000541661 NEBP20929 6669 aa6.16□□□□□ -1.42
SCARB1-207ENST00000541661 PCP4P48539 62 aa6.15□□□□□ -1.42
SCARB1-207ENST00000541661 ATP5EP2Q5VTU8 51 aa6.15□□□□□ -1.42
SCARB1-207ENST00000541661 UBL5Q9BZL1 73 aa6.14□□□□□ -1.43
SCARB1-207ENST00000541661 NDUFB1O75438 58 aa6.11□□□□□ -1.43
SCARB1-207ENST00000541661 H1FX-AS1Q4G0G2 97 aa6.1□□□□□ -1.43
SCARB1-207ENST00000541661 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
SCARB1-207ENST00000541661 Q6ZVQ6 151 aa6.09□□□□□ -1.43
SCARB1-207ENST00000541661 CXCL6P80162 114 aa6.08□□□□□ -1.44
SCARB1-207ENST00000541661 MUC12Q9UKN1 5478 aa6.08□□□□□ -1.44
SCARB1-207ENST00000541661 IGKV3D-7A0A0C4DH55 119 aa6.06□□□□□ -1.44
SCARB1-207ENST00000541661 HIST1H4AP62805 103 aaKnown RBP6.06□□□□□ -1.44
SCARB1-207ENST00000541661 NREPQ16612 68 aa6.04□□□□□ -1.44
SCARB1-207ENST00000541661 FAM236AA0A1B0GUQ0 79 aa6□□□□□ -1.45
SCARB1-207ENST00000541661 FAM236BA0A1B0GV22 79 aa6□□□□□ -1.45
SCARB1-207ENST00000541661 ANAPC13Q9BS18 74 aa6□□□□□ -1.45
SCARB1-207ENST00000541661 A6NN06 94 aa5.99□□□□□ -1.45
SCARB1-207ENST00000541661 PRR15Q8IV56 129 aa5.99□□□□□ -1.45
SCARB1-207ENST00000541661 ATOX1O00244 68 aa5.98□□□□□ -1.45
SCARB1-207ENST00000541661 BPY2O14599 106 aa5.98□□□□□ -1.45
SCARB1-207ENST00000541661 KRTAP20-1Q3LI63 56 aa5.98□□□□□ -1.45
SCARB1-207ENST00000541661 TMEM254Q8TBM7 123 aa5.98□□□□□ -1.45
SCARB1-207ENST00000541661 MRPL34Q9BQ48 92 aaKnown RBP5.98□□□□□ -1.45
SCARB1-207ENST00000541661 MMP24-AS1A0A0U1RRL7 71 aa5.96□□□□□ -1.46
SCARB1-207ENST00000541661 MT1BP07438 61 aa5.96□□□□□ -1.46
SCARB1-207ENST00000541661 A0A087WVE0 104 aa5.95□□□□□ -1.46
SCARB1-207ENST00000541661 SMIM20Q8N5G0 67 aa5.93□□□□□ -1.46
SCARB1-207ENST00000541661 IGKV2D-30A0A075B6S6 120 aa5.91□□□□□ -1.46
SCARB1-207ENST00000541661 hDV103S1A0JD37 113 aa5.91□□□□□ -1.46
SCARB1-207ENST00000541661 UQCRQO14949 82 aa5.91□□□□□ -1.46
SCARB1-207ENST00000541661 IGKV2-30P06310 120 aa5.91□□□□□ -1.46
SCARB1-207ENST00000541661 KRTAP5-9P26371 169 aa5.91□□□□□ -1.46
SCARB1-207ENST00000541661 KRTAP19-8Q3LI54 63 aa5.91□□□□□ -1.46
SCARB1-207ENST00000541661 Q5VV11 94 aa5.91□□□□□ -1.46
SCARB1-207ENST00000541661 SERP2Q8N6R1 65 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms