RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 LRRK2Q5S007 2527 aa2.92□□□□□ -1.94
SNHG1-218ENST00000541615 SPART-AS1P0CW21 52 aa2.92□□□□□ -1.94
SNHG1-218ENST00000541615 TLN1Q9Y490 2541 aaKnown RBP2.92□□□□□ -1.94
SNHG1-218ENST00000541615 HIVEP3Q5T1R4 2406 aa2.92□□□□□ -1.94
SNHG1-218ENST00000541615 NIPBLQ6KC79 2804 aaeCLIP2.92□□□□□ -1.948e-27■■■■□ 21.5
SNHG1-218ENST00000541615 NBASA2RRP1 2371 aa2.92□□□□□ -1.94
SNHG1-218ENST00000541615 SETD2Q9BYW2 2564 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-218ENST00000541615 ROS1P08922 2347 aa2.91□□□□□ -1.94
SNHG1-218ENST00000541615 NBPF19A0A087WUL8 3843 aa2.9□□□□□ -1.94
SNHG1-218ENST00000541615 AKAP6Q13023 2319 aa2.9□□□□□ -1.95
SNHG1-218ENST00000541615 TPRXLQ17RH7 258 aa2.9□□□□□ -1.95
SNHG1-218ENST00000541615 LINC01556Q5JQF7 62 aa2.9□□□□□ -1.95
SNHG1-218ENST00000541615 Q6YL49 198 aa2.9□□□□□ -1.95
SNHG1-218ENST00000541615 RELNP78509 3460 aa2.89□□□□□ -1.95
SNHG1-218ENST00000541615 C10orf99Q6UWK7 81 aa2.89□□□□□ -1.95
SNHG1-218ENST00000541615 PLAC4Q8WY50 150 aa2.89□□□□□ -1.95
SNHG1-218ENST00000541615 PRO2289Q9P1D8 64 aa2.89□□□□□ -1.95
SNHG1-218ENST00000541615 PRLHP81277 87 aa2.88□□□□□ -1.95
SNHG1-218ENST00000541615 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.87□□□□□ -1.953e-19■■■■■ 78.9
SNHG1-218ENST00000541615 APCP25054 2843 aa2.87□□□□□ -1.95
SNHG1-218ENST00000541615 K7EIL1 84 aa2.87□□□□□ -1.95
SNHG1-218ENST00000541615 BSNQ9UPA5 3926 aa2.86□□□□□ -1.95
SNHG1-218ENST00000541615 PDZD2O15018 2839 aa2.86□□□□□ -1.95
SNHG1-218ENST00000541615 TACC2O95359 2948 aa2.86□□□□□ -1.95
SNHG1-218ENST00000541615 CELSR1Q9NYQ6 3014 aa2.86□□□□□ -1.95
SNHG1-218ENST00000541615 KRTAP7-1Q8IUC3 87 aa2.85□□□□□ -1.95
SNHG1-218ENST00000541615 F8P00451 2351 aa2.85□□□□□ -1.95
SNHG1-218ENST00000541615 MAP1AP78559 2803 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-218ENST00000541615 OTOGQ6ZRI0 2925 aa2.84□□□□□ -1.95
SNHG1-218ENST00000541615 ADGRG4Q8IZF6 3080 aa2.84□□□□□ -1.95
SNHG1-218ENST00000541615 KRTAP10-11P60412 298 aa2.84□□□□□ -1.95
SNHG1-218ENST00000541615 C14orf177Q52M58 125 aa2.84□□□□□ -1.95
SNHG1-218ENST00000541615 ABCA2Q9BZC7 2435 aa2.84□□□□□ -1.95
SNHG1-218ENST00000541615 HIVEP1P15822 2718 aa2.84□□□□□ -1.96
SNHG1-218ENST00000541615 SPINK1P00995 79 aa2.83□□□□□ -1.96
SNHG1-218ENST00000541615 NF1P21359 2839 aa2.83□□□□□ -1.96
SNHG1-218ENST00000541615 DCHS2Q6V1P9 2916 aa2.82□□□□□ -1.96
SNHG1-218ENST00000541615 A0A1W2PPR1 153 aa2.82□□□□□ -1.96
SNHG1-218ENST00000541615 ANKHD1Q8IWZ3 2542 aaKnown RBP2.82□□□□□ -1.96
SNHG1-218ENST00000541615 SPENQ96T58 3664 aaKnown RBP2.81□□□□□ -1.96
SNHG1-218ENST00000541615 SPG11Q96JI7 2443 aa2.81□□□□□ -1.96
SNHG1-218ENST00000541615 A0A096LNI7 61 aa2.8□□□□□ -1.96
SNHG1-218ENST00000541615 INE1O15225 51 aa2.8□□□□□ -1.96
SNHG1-218ENST00000541615 HTN3P15516 51 aa2.8□□□□□ -1.96
SNHG1-218ENST00000541615 FBN3Q75N90 2809 aa2.8□□□□□ -1.96
SNHG1-218ENST00000541615 MTORP42345 2549 aa2.79□□□□□ -1.96
SNHG1-218ENST00000541615 KRTAP13-1Q8IUC0 172 aa2.79□□□□□ -1.96
SNHG1-218ENST00000541615 CCDC168Q8NDH2 2452 aa2.78□□□□□ -1.96
SNHG1-218ENST00000541615 HRNRQ86YZ3 2850 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-218ENST00000541615 UBE2DNLQ8IWF7 75 aa2.78□□□□□ -1.96
SNHG1-218ENST00000541615 TYMSOSQ8TAI1 123 aa2.78□□□□□ -1.96
SNHG1-218ENST00000541615 AKAP9Q99996 3911 aa2.78□□□□□ -1.96
SNHG1-218ENST00000541615 NOTCH3Q9UM47 2321 aa2.77□□□□□ -1.97
SNHG1-218ENST00000541615 CSMD1Q96PZ7 3565 aa2.76□□□□□ -1.97
SNHG1-218ENST00000541615 SPINK6Q6UWN8 80 aa2.76□□□□□ -1.97
SNHG1-218ENST00000541615 Q6ZRN7 208 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-218ENST00000541615 KRTAP10-9P60411 292 aa2.75□□□□□ -1.97
SNHG1-218ENST00000541615 R4GN34 69 aa2.75□□□□□ -1.97
SNHG1-218ENST00000541615 FN1P02751 2386 aaKnown RBP2.75□□□□□ -1.97
SNHG1-218ENST00000541615 DEFB135Q30KP9 77 aa2.74□□□□□ -1.97
SNHG1-218ENST00000541615 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
SNHG1-218ENST00000541615 TENM2Q9NT68 2774 aa2.74□□□□□ -1.97
SNHG1-218ENST00000541615 CSPG4Q6UVK1 2322 aa2.74□□□□□ -1.97
SNHG1-218ENST00000541615 COL6A5A8TX70 2615 aa2.73□□□□□ -1.97
SNHG1-218ENST00000541615 ATRQ13535 2644 aa2.73□□□□□ -1.97
SNHG1-218ENST00000541615 CSMD2Q7Z408 3487 aa2.73□□□□□ -1.97
SNHG1-218ENST00000541615 FLG2Q5D862 2391 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-218ENST00000541615 S4R3F8 94 aa2.73□□□□□ -1.97
SNHG1-218ENST00000541615 NBEAL1Q6ZS30 2694 aa2.73□□□□□ -1.97
SNHG1-218ENST00000541615 PP632Q6XCG6 107 aa2.72□□□□□ -1.97
SNHG1-218ENST00000541615 APLNQ9ULZ1 77 aa2.72□□□□□ -1.97
SNHG1-218ENST00000541615 ACANP16112 2415 aa2.72□□□□□ -1.97
SNHG1-218ENST00000541615 MXRA5Q9NR99 2828 aa2.71□□□□□ -1.98
SNHG1-218ENST00000541615 JMJD1CQ15652 2540 aa2.71□□□□□ -1.98
SNHG1-218ENST00000541615 HIVEP2P31629 2446 aa2.7□□□□□ -1.98
SNHG1-218ENST00000541615 FLNAP21333 2647 aaKnown RBP2.7□□□□□ -1.98
SNHG1-218ENST00000541615 DEFB4AO15263 64 aa2.7□□□□□ -1.98
SNHG1-218ENST00000541615 NSD1Q96L73 2696 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-218ENST00000541615 VPS13CQ709C8 3753 aa2.69□□□□□ -1.98
SNHG1-218ENST00000541615 SPACA4Q8TDM5 124 aa2.69□□□□□ -1.98
SNHG1-218ENST00000541615 ZNF469Q96JG9 3925 aaPredicted RBP2.69□□□□□ -1.98
SNHG1-218ENST00000541615 FBN1P35555 2871 aaKnown RBP2.69□□□□□ -1.98
SNHG1-218ENST00000541615 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
SNHG1-218ENST00000541615 PKD1L1Q8TDX9 2849 aa2.68□□□□□ -1.98
SNHG1-218ENST00000541615 STAB1Q9NY15 2570 aa2.66□□□□□ -1.98
SNHG1-218ENST00000541615 TLN2Q9Y4G6 2542 aa2.66□□□□□ -1.98
SNHG1-218ENST00000541615 KRTAP12-2P59991 146 aa2.65□□□□□ -1.99
SNHG1-218ENST00000541615 SONP18583 2426 aaKnown RBP2.65□□□□□ -1.99
SNHG1-218ENST00000541615 ZANQ9Y493 2812 aa2.64□□□□□ -1.99
SNHG1-218ENST00000541615 A0A0D9SG42 100 aa2.64□□□□□ -1.99
SNHG1-218ENST00000541615 M0QZ58 72 aa2.64□□□□□ -1.99
SNHG1-218ENST00000541615 SMR3AQ99954 134 aa2.64□□□□□ -1.99
SNHG1-218ENST00000541615 KRTAP1-5Q9BYS1 174 aa2.64□□□□□ -1.99
SNHG1-218ENST00000541615 DNHD1Q96M86 4753 aa2.63□□□□□ -1.99
SNHG1-218ENST00000541615 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
SNHG1-218ENST00000541615 TGP01266 2768 aa2.62□□□□□ -1.99
SNHG1-218ENST00000541615 KRTAP10-6P60371 365 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-218ENST00000541615 NOTCH1P46531 2555 aa2.61□□□□□ -1.99
SNHG1-218ENST00000541615 KRTAP10-7P60409 375 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-218ENST00000541615 CUBNO60494 3623 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms