RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 LINC00472Q9H8W2 130 aa3.76□□□□□ -1.81
LMO3-225ENST00000541295 DSCR10P59022 87 aa3.76□□□□□ -1.81
LMO3-225ENST00000541295 DEFB116Q30KQ4 102 aa3.76□□□□□ -1.81
LMO3-225ENST00000541295 DNAH3Q8TD57 4116 aa3.75□□□□□ -1.81
LMO3-225ENST00000541295 A0A087WTM6 91 aa3.74□□□□□ -1.81
LMO3-225ENST00000541295 LELP1Q5T871 98 aa3.74□□□□□ -1.81
LMO3-225ENST00000541295 TP53AIP1Q9HCN2 124 aa3.74□□□□□ -1.81
LMO3-225ENST00000541295 KRTAP15-1Q3LI76 137 aa3.72□□□□□ -1.81
LMO3-225ENST00000541295 A0A1B0GUV1 79 aa3.72□□□□□ -1.81
LMO3-225ENST00000541295 RPL37AP61513 92 aaKnown RBP3.72□□□□□ -1.81
LMO3-225ENST00000541295 STAB2Q8WWQ8 2551 aa3.72□□□□□ -1.81
LMO3-225ENST00000541295 NBDYA0A0U1RRE5 68 aa3.71□□□□□ -1.82
LMO3-225ENST00000541295 Q96NJ1 140 aa3.71□□□□□ -1.82
LMO3-225ENST00000541295 C6orf48Q9UBA6 75 aa3.7□□□□□ -1.82
LMO3-225ENST00000541295 IGLV5-48A0A075B6I7 105 aa3.68□□□□□ -1.82
LMO3-225ENST00000541295 IGLV6-57P01721 117 aa3.68□□□□□ -1.82
LMO3-225ENST00000541295 LINC00304Q8N9R0 145 aa3.68□□□□□ -1.82
LMO3-225ENST00000541295 A0A1B0GU33 70 aa3.67□□□□□ -1.82
LMO3-225ENST00000541295 H3BNG1 76 aa3.67□□□□□ -1.82
LMO3-225ENST00000541295 KRTAP29-1A8MX34 341 aaPredicted RBP3.67□□□□□ -1.82
LMO3-225ENST00000541295 UNQ6190/PRO20217Q6UXQ8 127 aa3.67□□□□□ -1.82
LMO3-225ENST00000541295 UBE2DNLQ8IWF7 75 aa3.67□□□□□ -1.82
LMO3-225ENST00000541295 DEFB105AQ8NG35 78 aa3.66□□□□□ -1.82
LMO3-225ENST00000541295 A0A1W2PNN7 141 aa3.65□□□□□ -1.82
LMO3-225ENST00000541295 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.82
LMO3-225ENST00000541295 IGKV2-24A0A0C4DH68 120 aa3.65□□□□□ -1.83
LMO3-225ENST00000541295 LINC01556Q5JQF7 62 aa3.65□□□□□ -1.83
LMO3-225ENST00000541295 CRIPTQ9P021 101 aa3.64□□□□□ -1.83
LMO3-225ENST00000541295 LORP23490 312 aaPredicted RBP3.63□□□□□ -1.83
LMO3-225ENST00000541295 HUWE1Q7Z6Z7 4374 aaKnown RBP3.63□□□□□ -1.83
LMO3-225ENST00000541295 COL7A1Q02388 2944 aa3.62□□□□□ -1.83
LMO3-225ENST00000541295 Q8N377 158 aa3.61□□□□□ -1.83
LMO3-225ENST00000541295 DNHD1Q96M86 4753 aa3.61□□□□□ -1.83
LMO3-225ENST00000541295 Q8N1X5 172 aa3.61□□□□□ -1.83
LMO3-225ENST00000541295 FAM168BA1KXE4 195 aa3.61□□□□□ -1.83
LMO3-225ENST00000541295 TENM2Q9NT68 2774 aa3.61□□□□□ -1.83
LMO3-225ENST00000541295 WWC2-AS2Q96NR7 200 aa3.6□□□□□ -1.83
LMO3-225ENST00000541295 KRTAP1-5Q9BYS1 174 aa3.59□□□□□ -1.83
LMO3-225ENST00000541295 APLNQ9ULZ1 77 aa3.59□□□□□ -1.83
LMO3-225ENST00000541295 DNAH9Q9NYC9 4486 aa3.58□□□□□ -1.84
LMO3-225ENST00000541295 GVQW2A0A096LPI5 108 aaPredicted RBP3.57□□□□□ -1.84
LMO3-225ENST00000541295 LY6G6CO95867 125 aa3.57□□□□□ -1.84
LMO3-225ENST00000541295 LCE2CQ5TA81 110 aa3.57□□□□□ -1.84
LMO3-225ENST00000541295 PSORS1C2Q9UIG4 136 aa3.57□□□□□ -1.84
LMO3-225ENST00000541295 MEGF8Q7Z7M0 2845 aa3.56□□□□□ -1.84
LMO3-225ENST00000541295 A0A0G2JQZ4 141 aa3.56□□□□□ -1.84
LMO3-225ENST00000541295 TGP01266 2768 aa3.56□□□□□ -1.84
LMO3-225ENST00000541295 DYNC2H1Q8NCM8 4307 aaKnown RBP3.55□□□□□ -1.84
LMO3-225ENST00000541295 PRKDCP78527 4128 aaKnown RBP3.54□□□□□ -1.84
LMO3-225ENST00000541295 Q6ZRX8 168 aa3.54□□□□□ -1.84
LMO3-225ENST00000541295 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
LMO3-225ENST00000541295 FLG2Q5D862 2391 aaPredicted RBP3.54□□□□□ -1.84
LMO3-225ENST00000541295 TYMSOSQ8TAI1 123 aa3.53□□□□□ -1.84
LMO3-225ENST00000541295 FBN3Q75N90 2809 aa3.53□□□□□ -1.84
LMO3-225ENST00000541295 DNAH7Q8WXX0 4024 aa3.52□□□□□ -1.85
LMO3-225ENST00000541295 ANAPC11Q9NYG5 84 aa3.52□□□□□ -1.85
LMO3-225ENST00000541295 R4GN34 69 aa3.52□□□□□ -1.85
LMO3-225ENST00000541295 LYSTQ99698 3801 aa3.52□□□□□ -1.85
LMO3-225ENST00000541295 A0A096LNI7 61 aa3.51□□□□□ -1.85
LMO3-225ENST00000541295 MMP24-AS1A0A0U1RRL7 71 aa3.51□□□□□ -1.85
LMO3-225ENST00000541295 MRPL34Q9BQ48 92 aaKnown RBP3.51□□□□□ -1.85
LMO3-225ENST00000541295 C14orf177Q52M58 125 aa3.5□□□□□ -1.85
LMO3-225ENST00000541295 PLECQ15149 4684 aaKnown RBP3.49□□□□□ -1.85
LMO3-225ENST00000541295 CSMD3Q7Z407 3707 aa3.49□□□□□ -1.85
LMO3-225ENST00000541295 DNAH10Q8IVF4 4471 aa3.49□□□□□ -1.85
LMO3-225ENST00000541295 STARD9Q9P2P6 4700 aa3.49□□□□□ -1.85
LMO3-225ENST00000541295 KRTAP21-3Q3LHN1 58 aa3.49□□□□□ -1.85
LMO3-225ENST00000541295 KRTAP7-1Q8IUC3 87 aa3.47□□□□□ -1.85
LMO3-225ENST00000541295 Q6ZRN7 208 aaPredicted RBP3.47□□□□□ -1.85
LMO3-225ENST00000541295 DNAH1Q9P2D7 4330 aa3.47□□□□□ -1.85
LMO3-225ENST00000541295 PRLHP81277 87 aa3.46□□□□□ -1.85
LMO3-225ENST00000541295 IGFL1Q6UW32 110 aa3.46□□□□□ -1.86
LMO3-225ENST00000541295 TPRXLQ17RH7 258 aa3.45□□□□□ -1.86
LMO3-225ENST00000541295 PLAC4Q8WY50 150 aa3.45□□□□□ -1.86
LMO3-225ENST00000541295 H0YAA0 97 aa3.45□□□□□ -1.86
LMO3-225ENST00000541295 DNAH6Q9C0G6 4158 aa3.41□□□□□ -1.86
LMO3-225ENST00000541295 SPACA4Q8TDM5 124 aa3.41□□□□□ -1.86
LMO3-225ENST00000541295 VPS13DQ5THJ4 4388 aa3.41□□□□□ -1.86
LMO3-225ENST00000541295 SPRR1AP35321 89 aa3.41□□□□□ -1.86
LMO3-225ENST00000541295 Q6ZSA8 131 aa3.41□□□□□ -1.86
LMO3-225ENST00000541295 KMT2AQ03164 3969 aa3.4□□□□□ -1.86
LMO3-225ENST00000541295 XP32Q5T750 250 aa3.4□□□□□ -1.87
LMO3-225ENST00000541295 KRTAP10-2P60368 255 aa3.39□□□□□ -1.87
LMO3-225ENST00000541295 H1FX-AS1Q4G0G2 97 aa3.39□□□□□ -1.87
LMO3-225ENST00000541295 COX6B2Q6YFQ2 88 aa3.39□□□□□ -1.87
LMO3-225ENST00000541295 SPINK1P00995 79 aa3.38□□□□□ -1.87
LMO3-225ENST00000541295 SRRM2Q9UQ35 2752 aaKnown RBP3.37□□□□□ -1.87
LMO3-225ENST00000541295 RPL37P61927 97 aaKnown RBP3.37□□□□□ -1.87
LMO3-225ENST00000541295 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
LMO3-225ENST00000541295 KRTAP10-1P60331 282 aa3.34□□□□□ -1.87
LMO3-225ENST00000541295 DNAH2Q9P225 4427 aa3.34□□□□□ -1.87
LMO3-225ENST00000541295 FRAS1Q86XX4 4008 aa3.34□□□□□ -1.87
LMO3-225ENST00000541295 ALMS1Q8TCU4 4167 aa3.33□□□□□ -1.88
LMO3-225ENST00000541295 HYDINQ4G0P3 5121 aa3.33□□□□□ -1.88
LMO3-225ENST00000541295 INE1O15225 51 aa3.32□□□□□ -1.88
LMO3-225ENST00000541295 KRTAP4-8Q9BYQ9 185 aa3.32□□□□□ -1.88
LMO3-225ENST00000541295 DNAH17Q9UFH2 4485 aa3.32□□□□□ -1.88
LMO3-225ENST00000541295 KRTAP13-1Q8IUC0 172 aa3.31□□□□□ -1.88
LMO3-225ENST00000541295 SACSQ9NZJ4 4579 aa3.29□□□□□ -1.88
LMO3-225ENST00000541295 HECTD4Q9Y4D8 3996 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms