RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
CYB561A3-216ENST00000540755 MT1HL1P0DM35 61 aa8.23□□□□□ -1.09
CYB561A3-216ENST00000540755 Q96NJ1 140 aa8.23□□□□□ -1.09
CYB561A3-216ENST00000540755 TRAV7A0A075B6U4 112 aa8.22□□□□□ -1.09
CYB561A3-216ENST00000540755 SPINK1P00995 79 aa8.22□□□□□ -1.09
CYB561A3-216ENST00000540755 SPAG11AQ6PDA7 123 aa8.22□□□□□ -1.09
CYB561A3-216ENST00000540755 LINC00304Q8N9R0 145 aa8.22□□□□□ -1.09
CYB561A3-216ENST00000540755 LIMD2Q9BT23 127 aa8.21□□□□□ -1.09
CYB561A3-216ENST00000540755 RPS29P62273 56 aaKnown RBP8.2□□□□□ -1.1
CYB561A3-216ENST00000540755 DEFB116Q30KQ4 102 aa8.2□□□□□ -1.1
CYB561A3-216ENST00000540755 A8MWP4 228 aa8.19□□□□□ -1.1
CYB561A3-216ENST00000540755 NDUFB1O75438 58 aa8.19□□□□□ -1.1
CYB561A3-216ENST00000540755 Q8N9L7 120 aa8.18□□□□□ -1.1
CYB561A3-216ENST00000540755 K7EQZ3 153 aa8.17□□□□□ -1.1
CYB561A3-216ENST00000540755 CCDC179H3BU77 68 aa8.16□□□□□ -1.1
CYB561A3-216ENST00000540755 KRTAP10-8P60410 259 aa8.16□□□□□ -1.1
CYB561A3-216ENST00000540755 PRR15Q8IV56 129 aa8.16□□□□□ -1.1
CYB561A3-216ENST00000540755 LRP2P98164 4655 aa8.16□□□□□ -1.1
CYB561A3-216ENST00000540755 TNXBP22105 4242 aa8.15□□□□□ -1.1
CYB561A3-216ENST00000540755 HCG22E2RYF7 251 aa8.15□□□□□ -1.1
CYB561A3-216ENST00000540755 C1orf195Q5TG92 126 aa8.13□□□□□ -1.11
CYB561A3-216ENST00000540755 OCR1Q9BZK8 76 aa8.1□□□□□ -1.11
CYB561A3-216ENST00000540755 A0A1B0GVX0 72 aa8.08□□□□□ -1.12
CYB561A3-216ENST00000540755 CASC2Q6XLA1 102 aa8.06□□□□□ -1.12
CYB561A3-216ENST00000540755 KLKP1Q107X0 134 aa8.06□□□□□ -1.12
CYB561A3-216ENST00000540755 NDUFC1O43677 76 aa8.05□□□□□ -1.12
CYB561A3-216ENST00000540755 C5orf47Q569G3 176 aa8.05□□□□□ -1.12
CYB561A3-216ENST00000540755 RNF213Q63HN8 5207 aa8.04□□□□□ -1.12
CYB561A3-216ENST00000540755 IGHV6-1A0A0B4J1U7 121 aa8.04□□□□□ -1.12
CYB561A3-216ENST00000540755 MMP24-AS1A0A0U1RRL7 71 aa8.04□□□□□ -1.12
CYB561A3-216ENST00000540755 C8orf17Q9NRJ1 99 aa8.03□□□□□ -1.12
CYB561A3-216ENST00000540755 C20orf197Q8N268 126 aa8.02□□□□□ -1.13
CYB561A3-216ENST00000540755 hDV103S1A0JD37 113 aa8.01□□□□□ -1.13
CYB561A3-216ENST00000540755 C8orf87E5RJ46 101 aa8.01□□□□□ -1.13
CYB561A3-216ENST00000540755 WFDC13Q8IUB5 93 aa8.01□□□□□ -1.13
CYB561A3-216ENST00000540755 TP53AIP1Q9HCN2 124 aa8□□□□□ -1.13
CYB561A3-216ENST00000540755 TMEM254Q8TBM7 123 aa8□□□□□ -1.13
CYB561A3-216ENST00000540755 H3BPC8 53 aa7.99□□□□□ -1.13
CYB561A3-216ENST00000540755 TMEM258P61165 79 aa7.99□□□□□ -1.13
CYB561A3-216ENST00000540755 NOTCH2NLQ7Z3S9 236 aa7.98□□□□□ -1.13
CYB561A3-216ENST00000540755 A0A0U1RQV1 116 aa7.95□□□□□ -1.14
CYB561A3-216ENST00000540755 MP68P56378 58 aa7.95□□□□□ -1.14
CYB561A3-216ENST00000540755 LINC00313P59037 77 aa7.95□□□□□ -1.14
CYB561A3-216ENST00000540755 RETNLBQ9BQ08 111 aa7.94□□□□□ -1.14
CYB561A3-216ENST00000540755 MRPL34Q9BQ48 92 aaKnown RBP7.94□□□□□ -1.14
CYB561A3-216ENST00000540755 H7BZZ5 65 aa7.91□□□□□ -1.14
CYB561A3-216ENST00000540755 FP248Q71RG6 208 aaPredicted RBP7.91□□□□□ -1.14
CYB561A3-216ENST00000540755 ATP5EP56381 51 aaPredicted RBP7.9□□□□□ -1.14
CYB561A3-216ENST00000540755 KRTAP16-1A8MUX0 517 aa7.89□□□□□ -1.15
CYB561A3-216ENST00000540755 SNURFQ9Y675 71 aa7.89□□□□□ -1.15
CYB561A3-216ENST00000540755 TRAV22A0A0B4J277 110 aa7.87□□□□□ -1.15
CYB561A3-216ENST00000540755 ZCCHC13Q8WW36 166 aaKnown RBP7.87□□□□□ -1.15
CYB561A3-216ENST00000540755 CYSTM1Q9H1C7 97 aa7.87□□□□□ -1.15
CYB561A3-216ENST00000540755 LPAP08519 4548 aa7.87□□□□□ -1.15
CYB561A3-216ENST00000540755 H0Y9P7 68 aa7.86□□□□□ -1.15
CYB561A3-216ENST00000540755 RPS28P62857 69 aaKnown RBP7.86□□□□□ -1.15
CYB561A3-216ENST00000540755 Q8N9P0 234 aaPredicted RBP7.86□□□□□ -1.15
CYB561A3-216ENST00000540755 NDUFS5O43920 106 aa7.84□□□□□ -1.15
CYB561A3-216ENST00000540755 FAM236DA0A1B0GTK5 79 aa7.82□□□□□ -1.16
CYB561A3-216ENST00000540755 FAM236CP0DP71 79 aa7.82□□□□□ -1.16
CYB561A3-216ENST00000540755 IGLV7-46A0A075B6I9 117 aa7.81□□□□□ -1.16
CYB561A3-216ENST00000540755 LINC00208Q96KT6 92 aa7.81□□□□□ -1.16
CYB561A3-216ENST00000540755 C9orf92A6NGG3 77 aa7.81□□□□□ -1.16
CYB561A3-216ENST00000540755 C1orf64Q8NEQ6 169 aa7.79□□□□□ -1.16
CYB561A3-216ENST00000540755 C20orf166-AS1Q96NR2 134 aa7.77□□□□□ -1.17
CYB561A3-216ENST00000540755 PRR4Q16378 134 aa7.76□□□□□ -1.17
CYB561A3-216ENST00000540755 KRTAP13-3Q3SY46 172 aa7.76□□□□□ -1.17
CYB561A3-216ENST00000540755 SPANXA2-OT1Q8N9U9 137 aa7.76□□□□□ -1.17
CYB561A3-216ENST00000540755 LOC101927531A0A1B0GV80 90 aa7.75□□□□□ -1.17
CYB561A3-216ENST00000540755 A8MUU9 505 aa7.75□□□□□ -1.17
CYB561A3-216ENST00000540755 SERP1Q9Y6X1 66 aa7.74□□□□□ -1.17
CYB561A3-216ENST00000540755 Q5W150 140 aa7.73□□□□□ -1.17
CYB561A3-216ENST00000540755 TPRXLQ17RH7 258 aa7.71□□□□□ -1.18
CYB561A3-216ENST00000540755 Q75L30 129 aa7.71□□□□□ -1.18
CYB561A3-216ENST00000540755 CYP4F30PQ9H0H9 118 aa7.71□□□□□ -1.18
CYB561A3-216ENST00000540755 MUC2Q02817 5179 aa7.7□□□□□ -1.18
CYB561A3-216ENST00000540755 XP32Q5T750 250 aa7.68□□□□□ -1.18
CYB561A3-216ENST00000540755 RPL37P61927 97 aaKnown RBP7.64□□□□□ -1.19
CYB561A3-216ENST00000540755 IGKV2-30P06310 120 aa7.61□□□□□ -1.19
CYB561A3-216ENST00000540755 ATP11AUNQ6ZP68 121 aa7.59□□□□□ -1.19
CYB561A3-216ENST00000540755 SMIM26A0A096LP01 95 aa7.57□□□□□ -1.2
CYB561A3-216ENST00000540755 PCOTHQ58A44 107 aa7.56□□□□□ -1.2
CYB561A3-216ENST00000540755 FAT4Q6V0I7 4981 aa7.55□□□□□ -1.2
CYB561A3-216ENST00000540755 C7orf65Q6ZTY9 151 aa7.55□□□□□ -1.2
CYB561A3-216ENST00000540755 IGKV2D-30A0A075B6S6 120 aa7.54□□□□□ -1.2
CYB561A3-216ENST00000540755 HRES1P13985 223 aa7.48□□□□□ -1.21
CYB561A3-216ENST00000540755 ACYP2P14621 99 aa7.48□□□□□ -1.21
CYB561A3-216ENST00000540755 SPINK7P58062 85 aa7.48□□□□□ -1.21
CYB561A3-216ENST00000540755 MUC17Q685J3 4493 aa7.46□□□□□ -1.22
CYB561A3-216ENST00000540755 LCE2AQ5TA79 106 aaPredicted RBP7.46□□□□□ -1.22
CYB561A3-216ENST00000540755 SEC61BP60468 96 aaKnown RBP7.44□□□□□ -1.22
CYB561A3-216ENST00000540755 DMAC1Q96GE9 116 aa7.44□□□□□ -1.22
CYB561A3-216ENST00000540755 V9GYY9 64 aa7.43□□□□□ -1.22
CYB561A3-216ENST00000540755 COA5Q86WW8 74 aa7.43□□□□□ -1.22
CYB561A3-216ENST00000540755 A8MUN3 132 aa7.42□□□□□ -1.22
CYB561A3-216ENST00000540755 KRTAP9-2Q9BYQ4 174 aa7.41□□□□□ -1.22
CYB561A3-216ENST00000540755 Q1T7F1 81 aa7.38□□□□□ -1.23
CYB561A3-216ENST00000540755 C4orf26Q17RF5 130 aa7.34□□□□□ -1.23
CYB561A3-216ENST00000540755 CHKB-CPT1BH3BT56 60 aa7.31□□□□□ -1.24
CYB561A3-216ENST00000540755 COX6B2Q6YFQ2 88 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms