RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 NDUFS5O43920 106 aa6.82□□□□□ -1.32
C11orf54-214ENST00000540113 IGLV7-43P04211 117 aa6.82□□□□□ -1.32
C11orf54-214ENST00000540113 PRO0628Q9UI54 55 aa6.82□□□□□ -1.32
C11orf54-214ENST00000540113 CIRBP-AS1Q8TBR5 109 aa6.82□□□□□ -1.32
C11orf54-214ENST00000540113 HYDINQ4G0P3 5121 aa6.81□□□□□ -1.32
C11orf54-214ENST00000540113 PKD1P98161 4303 aa6.81□□□□□ -1.32
C11orf54-214ENST00000540113 A0A1B0GVX0 72 aa6.8□□□□□ -1.32
C11orf54-214ENST00000540113 PCOTHQ58A44 107 aa6.8□□□□□ -1.32
C11orf54-214ENST00000540113 CYP4F30PQ9H0H9 118 aa6.8□□□□□ -1.32
C11orf54-214ENST00000540113 CDK2AP2O75956 126 aa6.79□□□□□ -1.32
C11orf54-214ENST00000540113 FAT2Q9NYQ8 4349 aa6.78□□□□□ -1.32
C11orf54-214ENST00000540113 PLA2G1BP04054 148 aaKnown RBP6.78□□□□□ -1.32
C11orf54-214ENST00000540113 ASB16-AS1Q495Z4 193 aa6.78□□□□□ -1.32
C11orf54-214ENST00000540113 KRTAP10-1P60331 282 aa6.77□□□□□ -1.33
C11orf54-214ENST00000540113 BRK1Q8WUW1 75 aa6.77□□□□□ -1.33
C11orf54-214ENST00000540113 H3BPC8 53 aa6.76□□□□□ -1.33
C11orf54-214ENST00000540113 PSPHP1O15172 72 aa6.76□□□□□ -1.33
C11orf54-214ENST00000540113 Q6ZSA8 131 aa6.76□□□□□ -1.33
C11orf54-214ENST00000540113 MRPL34Q9BQ48 92 aaKnown RBP6.74□□□□□ -1.33
C11orf54-214ENST00000540113 CD164Q04900 197 aa6.74□□□□□ -1.33
C11orf54-214ENST00000540113 LCE2CQ5TA81 110 aa6.74□□□□□ -1.33
C11orf54-214ENST00000540113 LRP1BQ9NZR2 4599 aa6.73□□□□□ -1.33
C11orf54-214ENST00000540113 LCE2BO14633 110 aa6.73□□□□□ -1.33
C11orf54-214ENST00000540113 SPANXA2-OT1Q8N9U9 137 aa6.72□□□□□ -1.33
C11orf54-214ENST00000540113 TP53AIP1Q9HCN2 124 aa6.72□□□□□ -1.33
C11orf54-214ENST00000540113 Q1T7F1 81 aa6.71□□□□□ -1.33
C11orf54-214ENST00000540113 SEC61GP60059 68 aa6.71□□□□□ -1.34
C11orf54-214ENST00000540113 Q5W150 140 aa6.7□□□□□ -1.34
C11orf54-214ENST00000540113 KRTAP13-2Q52LG2 175 aa6.69□□□□□ -1.34
C11orf54-214ENST00000540113 A8MUN3 132 aa6.68□□□□□ -1.34
C11orf54-214ENST00000540113 IGLV7-46A0A075B6I9 117 aa6.68□□□□□ -1.34
C11orf54-214ENST00000540113 LCE2AQ5TA79 106 aaPredicted RBP6.67□□□□□ -1.34
C11orf54-214ENST00000540113 COA5Q86WW8 74 aa6.67□□□□□ -1.34
C11orf54-214ENST00000540113 RETNLBQ9BQ08 111 aa6.67□□□□□ -1.34
C11orf54-214ENST00000540113 SSBP3-AS1Q7Z2R9 100 aa6.66□□□□□ -1.34
C11orf54-214ENST00000540113 SACSQ9NZJ4 4579 aa6.65□□□□□ -1.35
C11orf54-214ENST00000540113 Q8N9P0 234 aaPredicted RBP6.65□□□□□ -1.35
C11orf54-214ENST00000540113 VPS13BQ7Z7G8 4022 aa6.63□□□□□ -1.35
C11orf54-214ENST00000540113 KRTAP1-4P0C5Y4 121 aa6.63□□□□□ -1.35
C11orf54-214ENST00000540113 C1orf195Q5TG92 126 aa6.62□□□□□ -1.35
C11orf54-214ENST00000540113 A8MU10 97 aa6.61□□□□□ -1.35
C11orf54-214ENST00000540113 V9GYY9 64 aa6.61□□□□□ -1.35
C11orf54-214ENST00000540113 KRTAP13-3Q3SY46 172 aa6.6□□□□□ -1.35
C11orf54-214ENST00000540113 Q5VV11 94 aa6.6□□□□□ -1.35
C11orf54-214ENST00000540113 PRR15LQ9BU68 103 aa6.6□□□□□ -1.35
C11orf54-214ENST00000540113 LINC00313P59037 77 aa6.6□□□□□ -1.35
C11orf54-214ENST00000540113 HRES1P13985 223 aa6.59□□□□□ -1.35
C11orf54-214ENST00000540113 PKHD1P08F94 4074 aa6.58□□□□□ -1.36
C11orf54-214ENST00000540113 SPAG11AQ6PDA7 123 aa6.58□□□□□ -1.36
C11orf54-214ENST00000540113 LOC101927531A0A1B0GV80 90 aa6.57□□□□□ -1.36
C11orf54-214ENST00000540113 A0A1B0GVY2 172 aa6.57□□□□□ -1.36
C11orf54-214ENST00000540113 C8orf87E5RJ46 101 aa6.56□□□□□ -1.36
C11orf54-214ENST00000540113 CHKB-CPT1BH3BT56 60 aa6.55□□□□□ -1.36
C11orf54-214ENST00000540113 DYNC1H1Q14204 4646 aaKnown RBP6.54□□□□□ -1.36
C11orf54-214ENST00000540113 LIMD2Q9BT23 127 aa6.54□□□□□ -1.36
C11orf54-214ENST00000540113 SMR3BP02814 79 aaPredicted RBP6.54□□□□□ -1.36
C11orf54-214ENST00000540113 RYR2Q92736 4967 aa6.53□□□□□ -1.36
C11orf54-214ENST00000540113 PRR26Q8N8Z3 221 aa6.52□□□□□ -1.36
C11orf54-214ENST00000540113 TYMSOSQ8TAI1 123 aa6.52□□□□□ -1.36
C11orf54-214ENST00000540113 KRTAP16-1A8MUX0 517 aa6.52□□□□□ -1.37
C11orf54-214ENST00000540113 IGKV2D-30A0A075B6S6 120 aa6.47□□□□□ -1.37
C11orf54-214ENST00000540113 IGKV2-30P06310 120 aa6.47□□□□□ -1.37
C11orf54-214ENST00000540113 A6NED7 52 aa6.46□□□□□ -1.38
C11orf54-214ENST00000540113 KMT2CQ8NEZ4 4911 aaKnown RBP6.46□□□□□ -1.38
C11orf54-214ENST00000540113 Q75L30 129 aa6.46□□□□□ -1.38
C11orf54-214ENST00000540113 LINC01558Q9Y6Z2 57 aa6.46□□□□□ -1.38
C11orf54-214ENST00000540113 APOBP04114 4563 aaKnown RBP6.45□□□□□ -1.38
C11orf54-214ENST00000540113 LCA10Q71F78 164 aa6.45□□□□□ -1.38
C11orf54-214ENST00000540113 KRTAP10-4P60372 401 aaPredicted RBP6.44□□□□□ -1.38
C11orf54-214ENST00000540113 ACYP2P14621 99 aa6.44□□□□□ -1.38
C11orf54-214ENST00000540113 SPINK1P00995 79 aa6.42□□□□□ -1.38
C11orf54-214ENST00000540113 FAT1Q14517 4588 aa6.42□□□□□ -1.38
C11orf54-214ENST00000540113 SPINK7P58062 85 aa6.42□□□□□ -1.38
C11orf54-214ENST00000540113 DMAC1Q96GE9 116 aa6.42□□□□□ -1.38
C11orf54-214ENST00000540113 PMAIP1Q13794 54 aa6.41□□□□□ -1.38
C11orf54-214ENST00000540113 LINC00304Q8N9R0 145 aa6.41□□□□□ -1.38
C11orf54-214ENST00000540113 SPTSSBQ8NFR3 76 aa6.41□□□□□ -1.38
C11orf54-214ENST00000540113 C9orf92A6NGG3 77 aa6.38□□□□□ -1.39
C11orf54-214ENST00000540113 PKHD1L1Q86WI1 4243 aa6.37□□□□□ -1.39
C11orf54-214ENST00000540113 RPS29P62273 56 aaKnown RBP6.36□□□□□ -1.39
C11orf54-214ENST00000540113 C7orf65Q6ZTY9 151 aa6.35□□□□□ -1.39
C11orf54-214ENST00000540113 RYR3Q15413 4870 aa6.34□□□□□ -1.4
C11orf54-214ENST00000540113 Q8N1X5 172 aa6.33□□□□□ -1.4
C11orf54-214ENST00000540113 CDC42SE1Q9NRR8 79 aa6.33□□□□□ -1.4
C11orf54-214ENST00000540113 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
C11orf54-214ENST00000540113 ATP11AUNQ6ZP68 121 aa6.29□□□□□ -1.4
C11orf54-214ENST00000540113 A0A1B0GU69 56 aa6.28□□□□□ -1.4
C11orf54-214ENST00000540113 A6NN06 94 aa6.23□□□□□ -1.41
C11orf54-214ENST00000540113 LRP1Q07954 4544 aaKnown RBP6.21□□□□□ -1.41
C11orf54-214ENST00000540113 FLG2Q5D862 2391 aaPredicted RBP6.21□□□□□ -1.41
C11orf54-214ENST00000540113 A8MUU9 505 aa6.21□□□□□ -1.42
C11orf54-214ENST00000540113 SEC61BP60468 96 aaKnown RBP6.21□□□□□ -1.42
C11orf54-214ENST00000540113 Q5VSD8 79 aa6.21□□□□□ -1.42
C11orf54-214ENST00000540113 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.42
C11orf54-214ENST00000540113 KTN1-AS1Q86SY8 53 aa6.2□□□□□ -1.42
C11orf54-214ENST00000540113 HSPG2P98160 4391 aa6.2□□□□□ -1.42
C11orf54-214ENST00000540113 KRTAP17-1Q9BYP8 105 aa6.19□□□□□ -1.42
C11orf54-214ENST00000540113 TNXBP22105 4242 aa6.18□□□□□ -1.42
C11orf54-214ENST00000540113 KRTAP3-1Q9BYR8 98 aa6.17□□□□□ -1.42
C11orf54-214ENST00000540113 RYR1P21817 5038 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms