RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 MRPL34Q9BQ48 92 aaKnown RBP10.49□□□□□ -0.73
GNE-204ENST00000539208 FAT2Q9NYQ8 4349 aa10.45□□□□□ -0.74
GNE-204ENST00000539208 A0A087X002 238 aa10.45□□□□□ -0.74
GNE-204ENST00000539208 KRTAP13-2Q52LG2 175 aa10.45□□□□□ -0.74
GNE-204ENST00000539208 NOTCH2NLQ7Z3S9 236 aa10.45□□□□□ -0.74
GNE-204ENST00000539208 SPINK6Q6UWN8 80 aa10.43□□□□□ -0.74
GNE-204ENST00000539208 HYDINQ4G0P3 5121 aa10.43□□□□□ -0.74
GNE-204ENST00000539208 PRR4Q16378 134 aa10.43□□□□□ -0.74
GNE-204ENST00000539208 NDUFS5O43920 106 aa10.42□□□□□ -0.74
GNE-204ENST00000539208 C8orf87E5RJ46 101 aa10.39□□□□□ -0.75
GNE-204ENST00000539208 KRTAP1-4P0C5Y4 121 aa10.39□□□□□ -0.75
GNE-204ENST00000539208 LRP1BQ9NZR2 4599 aa10.37□□□□□ -0.75
GNE-204ENST00000539208 IGLV7-46A0A075B6I9 117 aa10.36□□□□□ -0.75
GNE-204ENST00000539208 MPLKIPQ8TAP9 179 aa10.36□□□□□ -0.75
GNE-204ENST00000539208 Q1T7F1 81 aa10.33□□□□□ -0.76
GNE-204ENST00000539208 C1orf195Q5TG92 126 aa10.33□□□□□ -0.76
GNE-204ENST00000539208 LIMD2Q9BT23 127 aa10.31□□□□□ -0.76
GNE-204ENST00000539208 KRTAP13-3Q3SY46 172 aa10.3□□□□□ -0.76
GNE-204ENST00000539208 LINC00313P59037 77 aa10.29□□□□□ -0.76
GNE-204ENST00000539208 PCOTHQ58A44 107 aa10.29□□□□□ -0.76
GNE-204ENST00000539208 LINC00336Q6ZUF6 198 aa10.29□□□□□ -0.76
GNE-204ENST00000539208 LOC101927531A0A1B0GV80 90 aa10.28□□□□□ -0.76
GNE-204ENST00000539208 PLA2G1BP04054 148 aaKnown RBP10.28□□□□□ -0.76
GNE-204ENST00000539208 Q5W150 140 aa10.27□□□□□ -0.77
GNE-204ENST00000539208 VPS13BQ7Z7G8 4022 aa10.25□□□□□ -0.77
GNE-204ENST00000539208 Q8N9P0 234 aaPredicted RBP10.24□□□□□ -0.77
GNE-204ENST00000539208 TYMSOSQ8TAI1 123 aa10.23□□□□□ -0.77
GNE-204ENST00000539208 C4orf48Q5BLP8 95 aa10.22□□□□□ -0.77
GNE-204ENST00000539208 V9GYY9 64 aa10.22□□□□□ -0.77
GNE-204ENST00000539208 SPINK1P00995 79 aa10.22□□□□□ -0.77
GNE-204ENST00000539208 COA5Q86WW8 74 aa10.21□□□□□ -0.78
GNE-204ENST00000539208 FAM229AH3BQW9 127 aa10.19□□□□□ -0.78
GNE-204ENST00000539208 A0A1B0GVY2 172 aa10.18□□□□□ -0.78
GNE-204ENST00000539208 KRTAP16-1A8MUX0 517 aa10.18□□□□□ -0.78
GNE-204ENST00000539208 SACSQ9NZJ4 4579 aa10.17□□□□□ -0.78
GNE-204ENST00000539208 PRO0628Q9UI54 55 aa10.16□□□□□ -0.78
GNE-204ENST00000539208 RPS29P62273 56 aaKnown RBP10.15□□□□□ -0.78
GNE-204ENST00000539208 PKHD1P08F94 4074 aa10.12□□□□□ -0.79
GNE-204ENST00000539208 SPAG11AQ6PDA7 123 aa10.11□□□□□ -0.79
GNE-204ENST00000539208 PRR26Q8N8Z3 221 aa10.11□□□□□ -0.79
GNE-204ENST00000539208 PSPHP1O15172 72 aa10.1□□□□□ -0.79
GNE-204ENST00000539208 LINC00304Q8N9R0 145 aa10.1□□□□□ -0.79
GNE-204ENST00000539208 HRES1P13985 223 aa10.09□□□□□ -0.79
GNE-204ENST00000539208 BRK1Q8WUW1 75 aa10.09□□□□□ -0.79
GNE-204ENST00000539208 SMR3BP02814 79 aaPredicted RBP10.08□□□□□ -0.8
GNE-204ENST00000539208 IGKV2-30P06310 120 aa10.07□□□□□ -0.8
GNE-204ENST00000539208 A8MUN3 132 aa10.06□□□□□ -0.8
GNE-204ENST00000539208 KRTAP10-4P60372 401 aaPredicted RBP10.06□□□□□ -0.8
GNE-204ENST00000539208 DYNC1H1Q14204 4646 aaKnown RBP10.05□□□□□ -0.8
GNE-204ENST00000539208 Q5VV11 94 aa10.02□□□□□ -0.8
GNE-204ENST00000539208 RETNLBQ9BQ08 111 aa10.02□□□□□ -0.8
GNE-204ENST00000539208 ACYP2P14621 99 aa10.01□□□□□ -0.81
GNE-204ENST00000539208 DMAC1Q96GE9 116 aa9.99□□□□□ -0.81
GNE-204ENST00000539208 PRR15LQ9BU68 103 aa9.98□□□□□ -0.81
GNE-204ENST00000539208 LINC01558Q9Y6Z2 57 aa9.98□□□□□ -0.81
GNE-204ENST00000539208 Q75L30 129 aa9.94□□□□□ -0.82
GNE-204ENST00000539208 APOBP04114 4563 aaKnown RBP9.94□□□□□ -0.82
GNE-204ENST00000539208 RYR2Q92736 4967 aa9.93□□□□□ -0.82
GNE-204ENST00000539208 CHKB-CPT1BH3BT56 60 aa9.9□□□□□ -0.82
GNE-204ENST00000539208 IGKV2D-30A0A075B6S6 120 aa9.9□□□□□ -0.83
GNE-204ENST00000539208 PKHD1L1Q86WI1 4243 aa9.86□□□□□ -0.83
GNE-204ENST00000539208 FAT1Q14517 4588 aa9.84□□□□□ -0.83
GNE-204ENST00000539208 C20orf166-AS1Q96NR2 134 aa9.82□□□□□ -0.84
GNE-204ENST00000539208 C7orf65Q6ZTY9 151 aa9.82□□□□□ -0.84
GNE-204ENST00000539208 A8MUU9 505 aa9.81□□□□□ -0.84
GNE-204ENST00000539208 KMT2CQ8NEZ4 4911 aaKnown RBP9.77□□□□□ -0.84
GNE-204ENST00000539208 A6NED7 52 aa9.77□□□□□ -0.85
GNE-204ENST00000539208 C9orf92A6NGG3 77 aa9.77□□□□□ -0.85
GNE-204ENST00000539208 LCA10Q71F78 164 aa9.73□□□□□ -0.85
GNE-204ENST00000539208 A8MU10 97 aa9.72□□□□□ -0.85
GNE-204ENST00000539208 CDC42SE1Q9NRR8 79 aa9.7□□□□□ -0.86
GNE-204ENST00000539208 KRTAP10-8P60410 259 aa9.69□□□□□ -0.86
GNE-204ENST00000539208 Q8N1X5 172 aa9.67□□□□□ -0.86
GNE-204ENST00000539208 SPINK7P58062 85 aa9.67□□□□□ -0.86
GNE-204ENST00000539208 Q5VSD8 79 aa9.66□□□□□ -0.86
GNE-204ENST00000539208 ATP11AUNQ6ZP68 121 aa9.64□□□□□ -0.87
GNE-204ENST00000539208 FLG2Q5D862 2391 aaPredicted RBP9.64□□□□□ -0.87
GNE-204ENST00000539208 A0A1B0GU69 56 aa9.63□□□□□ -0.87
GNE-204ENST00000539208 PMAIP1Q13794 54 aa9.56□□□□□ -0.88
GNE-204ENST00000539208 SPTSSBQ8NFR3 76 aa9.55□□□□□ -0.88
GNE-204ENST00000539208 TNXBP22105 4242 aa9.55□□□□□ -0.88
GNE-204ENST00000539208 HSPG2P98160 4391 aa9.54□□□□□ -0.88
GNE-204ENST00000539208 FAT3Q8TDW7 4589 aa9.51□□□□□ -0.89
GNE-204ENST00000539208 KRTAP3-1Q9BYR8 98 aa9.51□□□□□ -0.89
GNE-204ENST00000539208 LRP1Q07954 4544 aaKnown RBP9.49□□□□□ -0.89
GNE-204ENST00000539208 RYR1P21817 5038 aa9.49□□□□□ -0.89
GNE-204ENST00000539208 RYR3Q15413 4870 aa9.49□□□□□ -0.89
GNE-204ENST00000539208 KRTAP17-1Q9BYP8 105 aa9.47□□□□□ -0.89
GNE-204ENST00000539208 SPATA8Q6RVD6 105 aa9.46□□□□□ -0.9
GNE-204ENST00000539208 A6NN06 94 aa9.44□□□□□ -0.9
GNE-204ENST00000539208 UQCR11O14957 56 aa9.44□□□□□ -0.9
GNE-204ENST00000539208 RPL37P61927 97 aaKnown RBP9.43□□□□□ -0.9
GNE-204ENST00000539208 COX6B2Q6YFQ2 88 aa9.43□□□□□ -0.9
GNE-204ENST00000539208 SEC61GP60059 68 aa9.4□□□□□ -0.9
GNE-204ENST00000539208 MT1HL1P0DM35 61 aa9.4□□□□□ -0.91
GNE-204ENST00000539208 MIR22HGQ0VDD5 57 aa9.39□□□□□ -0.91
GNE-204ENST00000539208 XP32Q5T750 250 aa9.39□□□□□ -0.91
GNE-204ENST00000539208 KTN1-AS1Q86SY8 53 aa9.33□□□□□ -0.92
GNE-204ENST00000539208 DMBT1Q9UGM3 2413 aaPredicted RBP9.31□□□□□ -0.92
GNE-204ENST00000539208 KIAA1109Q2LD37 5005 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms