RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TMEM256-PLSCR3K7ERE1 68 aa7.18□□□□□ -1.26
SMARCA4-206ENST00000538456 F8WEM9 126 aa7.17□□□□□ -1.26
SMARCA4-206ENST00000538456 PPDPFLQ8WWR9 84 aa7.16□□□□□ -1.26
SMARCA4-206ENST00000538456 KRTAP19-1Q8IUB9 90 aa7.15□□□□□ -1.26
SMARCA4-206ENST00000538456 TRBV7-7A0A0K0K1E9 115 aa7.13□□□□□ -1.27
SMARCA4-206ENST00000538456 MT2AP02795 61 aa7.13□□□□□ -1.27
SMARCA4-206ENST00000538456 Q96NJ1 140 aa7.13□□□□□ -1.27
SMARCA4-206ENST00000538456 JMJD7-PLA2G4BH0Y9G9 81 aa7.11□□□□□ -1.27
SMARCA4-206ENST00000538456 LCE2BO14633 110 aa7.11□□□□□ -1.27
SMARCA4-206ENST00000538456 Q6JHZ5 121 aa7.1□□□□□ -1.27
SMARCA4-206ENST00000538456 IGFL1Q6UW32 110 aa7.1□□□□□ -1.27
SMARCA4-206ENST00000538456 J3QR89 54 aa7.09□□□□□ -1.27
SMARCA4-206ENST00000538456 K7ERU9 68 aa7.09□□□□□ -1.27
SMARCA4-206ENST00000538456 MT1FP04733 61 aa7.08□□□□□ -1.28
SMARCA4-206ENST00000538456 NDUFV3P56181 108 aaKnown RBP7.08□□□□□ -1.28
SMARCA4-206ENST00000538456 RBM3P98179 157 aaKnown RBP7.05□□□□□ -1.28
SMARCA4-206ENST00000538456 C20orf166-AS1Q96NR2 134 aa7.05□□□□□ -1.28
SMARCA4-206ENST00000538456 C14orf132Q9NPU4 83 aa7.05□□□□□ -1.28
SMARCA4-206ENST00000538456 FAM236DA0A1B0GTK5 79 aa7.04□□□□□ -1.28
SMARCA4-206ENST00000538456 FAM236CP0DP71 79 aa7.04□□□□□ -1.28
SMARCA4-206ENST00000538456 KRTAP10-10P60014 251 aa7.04□□□□□ -1.28
SMARCA4-206ENST00000538456 LOC110117498A0A087WWA1 95 aa7.03□□□□□ -1.28
SMARCA4-206ENST00000538456 TRBV7-4A0A0J9YYF1 115 aa7.03□□□□□ -1.28
SMARCA4-206ENST00000538456 A0A1B0GV72 72 aa7.03□□□□□ -1.28
SMARCA4-206ENST00000538456 A8MUU9 505 aa7.03□□□□□ -1.28
SMARCA4-206ENST00000538456 PDE6GP18545 87 aa7.03□□□□□ -1.28
SMARCA4-206ENST00000538456 C21orf62-AS1Q17RA5 79 aa7.03□□□□□ -1.28
SMARCA4-206ENST00000538456 KRTAP9-3Q9BYQ3 159 aa7.03□□□□□ -1.28
SMARCA4-206ENST00000538456 FAM240AA0A1B0GVK7 77 aa7.02□□□□□ -1.29
SMARCA4-206ENST00000538456 DSCR8Q96T75 97 aa7.02□□□□□ -1.29
SMARCA4-206ENST00000538456 Q6ZQT0 140 aa7.01□□□□□ -1.29
SMARCA4-206ENST00000538456 CCKP06307 115 aa7□□□□□ -1.29
SMARCA4-206ENST00000538456 ACYP1P07311 99 aa6.99□□□□□ -1.29
SMARCA4-206ENST00000538456 SS18L2Q9UHA2 77 aa6.97□□□□□ -1.29
SMARCA4-206ENST00000538456 DSCR10P59022 87 aa6.96□□□□□ -1.3
SMARCA4-206ENST00000538456 KRTAP16-1A8MUX0 517 aa6.95□□□□□ -1.3
SMARCA4-206ENST00000538456 A0A1B0GW54 56 aa6.93□□□□□ -1.3
SMARCA4-206ENST00000538456 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
SMARCA4-206ENST00000538456 VPS25Q9BRG1 176 aa6.92□□□□□ -1.3
SMARCA4-206ENST00000538456 A0A087WSZ3 146 aa6.91□□□□□ -1.3
SMARCA4-206ENST00000538456 A0A1W2PNM2 257 aa6.91□□□□□ -1.3
SMARCA4-206ENST00000538456 LINC00846Q9NV44 126 aa6.91□□□□□ -1.3
SMARCA4-206ENST00000538456 HRES1P13985 223 aa6.9□□□□□ -1.3
SMARCA4-206ENST00000538456 MPLKIPQ8TAP9 179 aa6.9□□□□□ -1.3
SMARCA4-206ENST00000538456 SIGMAR1Q99720 223 aa6.9□□□□□ -1.3
SMARCA4-206ENST00000538456 KRTAP19-6Q3LI70 58 aa6.89□□□□□ -1.31
SMARCA4-206ENST00000538456 UBL5Q9BZL1 73 aa6.87□□□□□ -1.31
SMARCA4-206ENST00000538456 LINC00313P59037 77 aa6.86□□□□□ -1.31
SMARCA4-206ENST00000538456 LINC00643Q86TS7 51 aa6.86□□□□□ -1.31
SMARCA4-206ENST00000538456 Q6ZVQ6 151 aa6.84□□□□□ -1.31
SMARCA4-206ENST00000538456 NOTCH2NLQ7Z3S9 236 aa6.84□□□□□ -1.31
SMARCA4-206ENST00000538456 NEBP20929 6669 aa6.81□□□□□ -1.32
SMARCA4-206ENST00000538456 IGKV4-1P06312 121 aa6.81□□□□□ -1.32
SMARCA4-206ENST00000538456 NREPQ16612 68 aa6.81□□□□□ -1.32
SMARCA4-206ENST00000538456 ATP5EP2Q5VTU8 51 aa6.81□□□□□ -1.32
SMARCA4-206ENST00000538456 KRTAP6-3Q3LI67 103 aa6.8□□□□□ -1.32
SMARCA4-206ENST00000538456 MT-ATP8P03928 68 aa6.79□□□□□ -1.32
SMARCA4-206ENST00000538456 CXCL6P80162 114 aa6.76□□□□□ -1.33
SMARCA4-206ENST00000538456 DEFB116Q30KQ4 102 aa6.76□□□□□ -1.33
SMARCA4-206ENST00000538456 IMUPQ9GZP8 106 aa6.76□□□□□ -1.33
SMARCA4-206ENST00000538456 IGHV6-1A0A0B4J1U7 121 aa6.75□□□□□ -1.33
SMARCA4-206ENST00000538456 IGKV3D-7A0A0C4DH55 119 aa6.75□□□□□ -1.33
SMARCA4-206ENST00000538456 BPY2O14599 106 aa6.74□□□□□ -1.33
SMARCA4-206ENST00000538456 Q8N9P0 234 aaPredicted RBP6.74□□□□□ -1.33
SMARCA4-206ENST00000538456 LINC00472Q9H8W2 130 aa6.73□□□□□ -1.33
SMARCA4-206ENST00000538456 A8MWP4 228 aa6.71□□□□□ -1.34
SMARCA4-206ENST00000538456 J3KT08 172 aa6.7□□□□□ -1.34
SMARCA4-206ENST00000538456 SPINK7P58062 85 aa6.69□□□□□ -1.34
SMARCA4-206ENST00000538456 HIST1H4AP62805 103 aaKnown RBP6.67□□□□□ -1.34
SMARCA4-206ENST00000538456 ZCCHC13Q8WW36 166 aaKnown RBP6.67□□□□□ -1.34
SMARCA4-206ENST00000538456 SCGB1A1P11684 91 aa6.66□□□□□ -1.34
SMARCA4-206ENST00000538456 MUC12Q9UKN1 5478 aa6.66□□□□□ -1.34
SMARCA4-206ENST00000538456 A0A087WVE0 104 aa6.64□□□□□ -1.35
SMARCA4-206ENST00000538456 A0A1B0GVX0 72 aa6.64□□□□□ -1.35
SMARCA4-206ENST00000538456 K7EQZ3 153 aa6.64□□□□□ -1.35
SMARCA4-206ENST00000538456 WFDC13Q8IUB5 93 aa6.64□□□□□ -1.35
SMARCA4-206ENST00000538456 Q8N9L7 120 aa6.64□□□□□ -1.35
SMARCA4-206ENST00000538456 C8orf87E5RJ46 101 aa6.63□□□□□ -1.35
SMARCA4-206ENST00000538456 NDUFB1O75438 58 aa6.62□□□□□ -1.35
SMARCA4-206ENST00000538456 PRR15Q8IV56 129 aa6.62□□□□□ -1.35
SMARCA4-206ENST00000538456 FAM236AA0A1B0GUQ0 79 aa6.61□□□□□ -1.35
SMARCA4-206ENST00000538456 FAM236BA0A1B0GV22 79 aa6.61□□□□□ -1.35
SMARCA4-206ENST00000538456 HCG22E2RYF7 251 aa6.56□□□□□ -1.36
SMARCA4-206ENST00000538456 MMP24-AS1A0A0U1RRL7 71 aa6.55□□□□□ -1.36
SMARCA4-206ENST00000538456 ATOX1O00244 68 aa6.55□□□□□ -1.36
SMARCA4-206ENST00000538456 C8orf17Q9NRJ1 99 aa6.54□□□□□ -1.36
SMARCA4-206ENST00000538456 CASC2Q6XLA1 102 aa6.52□□□□□ -1.37
SMARCA4-206ENST00000538456 KRTAP20-1Q3LI63 56 aa6.51□□□□□ -1.37
SMARCA4-206ENST00000538456 hDV103S1A0JD37 113 aa6.5□□□□□ -1.37
SMARCA4-206ENST00000538456 SMIM20Q8N5G0 67 aa6.5□□□□□ -1.37
SMARCA4-206ENST00000538456 TMEM254Q8TBM7 123 aa6.49□□□□□ -1.37
SMARCA4-206ENST00000538456 ANAPC13Q9BS18 74 aa6.49□□□□□ -1.37
SMARCA4-206ENST00000538456 H1FX-AS1Q4G0G2 97 aa6.48□□□□□ -1.37
SMARCA4-206ENST00000538456 A6NN06 94 aa6.47□□□□□ -1.37
SMARCA4-206ENST00000538456 TRAV7A0A075B6U4 112 aa6.46□□□□□ -1.38
SMARCA4-206ENST00000538456 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
SMARCA4-206ENST00000538456 OCR1Q9BZK8 76 aa6.46□□□□□ -1.38
SMARCA4-206ENST00000538456 SERP2Q8N6R1 65 aa6.45□□□□□ -1.38
SMARCA4-206ENST00000538456 PCP4P48539 62 aa6.44□□□□□ -1.38
SMARCA4-206ENST00000538456 MDN1Q9NU22 5596 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms