RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 COLCA2A8K830 154 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 HIST1H2BKO60814 126 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 MT1FP04733 61 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 HIST1H2BJP06899 126 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 HIST1H2BOP23527 126 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 HIST1H2BBP33778 126 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 HIST1H2BDP58876 126 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 KRTAP12-2P59991 146 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 KRTDAPP60985 99 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 HIST1H2BCP62807 126 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 HIST2H2BEQ16778 126 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.63□□□□□ -1.99
SNHG1-207ENST00000537965 HIST1H2BHQ93079 126 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 HIST1H2BNQ99877 126 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 HIST1H2BMQ99879 126 aa2.63□□□□□ -1.99
SNHG1-207ENST00000537965 H3BUT2 72 aa2.62□□□□□ -1.99
SNHG1-207ENST00000537965 KRTAP19-6Q3LI70 58 aa2.62□□□□□ -1.99
SNHG1-207ENST00000537965 USH2AO75445 5202 aa2.61□□□□□ -1.99
SNHG1-207ENST00000537965 A0A087WSZ3 146 aa2.61□□□□□ -1.99
SNHG1-207ENST00000537965 H0YGX0 51 aa2.61□□□□□ -1.99
SNHG1-207ENST00000537965 SIGMAR1Q99720 223 aa2.61□□□□□ -1.99
SNHG1-207ENST00000537965 SSPOA2VEC9 5147 aa2.61□□□□□ -1.99
SNHG1-207ENST00000537965 A8MWP4 228 aa2.6□□□□□ -1.99
SNHG1-207ENST00000537965 HSBP1L1C9JCN9 74 aa2.6□□□□□ -1.99
SNHG1-207ENST00000537965 IGKV4-1P06312 121 aa2.6□□□□□ -1.99
SNHG1-207ENST00000537965 HRES1P13985 223 aa2.6□□□□□ -1.99
SNHG1-207ENST00000537965 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
SNHG1-207ENST00000537965 H3BMG7 143 aa2.59□□□□□ -1.99
SNHG1-207ENST00000537965 COA6Q5JTJ3 125 aaKnown RBP2.59□□□□□ -1.99
SNHG1-207ENST00000537965 ATOH7Q8N100 152 aa2.59□□□□□ -1.99
SNHG1-207ENST00000537965 A0A1B0GX51 115 aa2.58□□□□□ -2
SNHG1-207ENST00000537965 H3BQ85 93 aa2.58□□□□□ -2
SNHG1-207ENST00000537965 HIST1H4GQ99525 98 aa2.58□□□□□ -2
SNHG1-207ENST00000537965 TRBV7-4A0A0J9YYF1 115 aa2.57□□□□□ -2
SNHG1-207ENST00000537965 FABP2P12104 132 aa2.57□□□□□ -2
SNHG1-207ENST00000537965 ANKRD29Q8N6D5 301 aa2.57□□□□□ -2
SNHG1-207ENST00000537965 RAB37Q96AX2 223 aa2.57□□□□□ -2
SNHG1-207ENST00000537965 C8orf87E5RJ46 101 aa2.56□□□□□ -2
SNHG1-207ENST00000537965 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
SNHG1-207ENST00000537965 IGHV6-1A0A0B4J1U7 121 aa2.55□□□□□ -2
SNHG1-207ENST00000537965 A0A1W2PNM2 257 aa2.55□□□□□ -2
SNHG1-207ENST00000537965 SPINK7P58062 85 aa2.55□□□□□ -2
SNHG1-207ENST00000537965 ZCCHC13Q8WW36 166 aaKnown RBP2.55□□□□□ -2
SNHG1-207ENST00000537965 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
SNHG1-207ENST00000537965 DNAL4O96015 105 aa2.54□□□□□ -2
SNHG1-207ENST00000537965 TRACP01848 142 aa2.54□□□□□ -2
SNHG1-207ENST00000537965 LCE3AQ5TA76 89 aa2.54□□□□□ -2
SNHG1-207ENST00000537965 LINC00472Q9H8W2 130 aa2.54□□□□□ -2
SNHG1-207ENST00000537965 A0A0B4J2C4 111 aa2.53□□□□□ -2
SNHG1-207ENST00000537965 A0A1B0GVX0 72 aa2.53□□□□□ -2
SNHG1-207ENST00000537965 J3KT08 172 aa2.53□□□□□ -2
SNHG1-207ENST00000537965 TMEM256-PLSCR3K7ERE1 68 aa2.53□□□□□ -2
SNHG1-207ENST00000537965 CCKP06307 115 aa2.53□□□□□ -2
SNHG1-207ENST00000537965 S100A2P29034 98 aa2.53□□□□□ -2
SNHG1-207ENST00000537965 DLEU1O43261 78 aa2.52□□□□□ -2.01
SNHG1-207ENST00000537965 NDUFB1O75438 58 aa2.52□□□□□ -2.01
SNHG1-207ENST00000537965 COX8AP10176 69 aa2.52□□□□□ -2.01
SNHG1-207ENST00000537965 DEFB116Q30KQ4 102 aa2.52□□□□□ -2.01
SNHG1-207ENST00000537965 LYRM7Q5U5X0 104 aa2.52□□□□□ -2.01
SNHG1-207ENST00000537965 DSCR8Q96T75 97 aa2.52□□□□□ -2.01
SNHG1-207ENST00000537965 ORMDL1Q9P0S3 153 aa2.52□□□□□ -2.01
SNHG1-207ENST00000537965 SYNE2Q8WXH0 6885 aaKnown RBP2.51□□□□□ -2.01
SNHG1-207ENST00000537965 WFDC13Q8IUB5 93 aa2.51□□□□□ -2.01
SNHG1-207ENST00000537965 PRO1854Q9UHT4 67 aa2.51□□□□□ -2.01
SNHG1-207ENST00000537965 COX6CP09669 75 aa2.5□□□□□ -2.01
SNHG1-207ENST00000537965 HIGD1BQ9P298 99 aa2.5□□□□□ -2.01
SNHG1-207ENST00000537965 H1FX-AS1Q4G0G2 97 aa2.49□□□□□ -2.01
SNHG1-207ENST00000537965 HIST3H2BBQ8N257 126 aa2.49□□□□□ -2.01
SNHG1-207ENST00000537965 HIST1H2BLQ99880 126 aa2.49□□□□□ -2.01
SNHG1-207ENST00000537965 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
SNHG1-207ENST00000537965 A0A1B0GV72 72 aa2.48□□□□□ -2.01
SNHG1-207ENST00000537965 S100A6P06703 90 aa2.48□□□□□ -2.01
SNHG1-207ENST00000537965 PSMB2P49721 201 aa2.48□□□□□ -2.01
SNHG1-207ENST00000537965 RBM3P98179 157 aaKnown RBP2.48□□□□□ -2.01
SNHG1-207ENST00000537965 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
SNHG1-207ENST00000537965 CEND1Q8N111 149 aa2.48□□□□□ -2.01
SNHG1-207ENST00000537965 VPS25Q9BRG1 176 aa2.48□□□□□ -2.01
SNHG1-207ENST00000537965 IGKV3D-7A0A0C4DH55 119 aa2.47□□□□□ -2.01
SNHG1-207ENST00000537965 A6NN06 94 aa2.47□□□□□ -2.01
SNHG1-207ENST00000537965 A0A1B0GW54 56 aa2.46□□□□□ -2.02
SNHG1-207ENST00000537965 C9JAW5 83 aa2.46□□□□□ -2.02
SNHG1-207ENST00000537965 C14orf144Q96I85 54 aa2.46□□□□□ -2.02
SNHG1-207ENST00000537965 C8orf17Q9NRJ1 99 aa2.46□□□□□ -2.02
SNHG1-207ENST00000537965 S100A1P23297 94 aa2.45□□□□□ -2.02
SNHG1-207ENST00000537965 Q6ZQT0 140 aa2.45□□□□□ -2.02
SNHG1-207ENST00000537965 C2orf91Q6ZV80 131 aa2.45□□□□□ -2.02
SNHG1-207ENST00000537965 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
SNHG1-207ENST00000537965 SPATA45Q537H7 98 aa2.44□□□□□ -2.02
SNHG1-207ENST00000537965 FAM236AA0A1B0GUQ0 79 aa2.43□□□□□ -2.02
SNHG1-207ENST00000537965 FAM236BA0A1B0GV22 79 aa2.43□□□□□ -2.02
SNHG1-207ENST00000537965 FXYD2P54710 66 aa2.43□□□□□ -2.02
SNHG1-207ENST00000537965 Q5VV11 94 aa2.43□□□□□ -2.02
SNHG1-207ENST00000537965 VAMP8Q9BV40 100 aa2.43□□□□□ -2.02
SNHG1-207ENST00000537965 JMJD7-PLA2G4BH0Y9G9 81 aa2.42□□□□□ -2.02
SNHG1-207ENST00000537965 SCGB1C2P0DMR2 95 aa2.42□□□□□ -2.02
SNHG1-207ENST00000537965 PDE6GP18545 87 aa2.42□□□□□ -2.02
SNHG1-207ENST00000537965 C7orf65Q6ZTY9 151 aa2.42□□□□□ -2.02
SNHG1-207ENST00000537965 TMEM254Q8TBM7 123 aa2.42□□□□□ -2.02
SNHG1-207ENST00000537965 MRPL34Q9BQ48 92 aaKnown RBP2.42□□□□□ -2.02
SNHG1-207ENST00000537965 NDUFS5O43920 106 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms