RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 PDE6GP18545 87 aa4.67□□□□□ -1.66
SMAD3-203ENST00000537194 Q6ZQY7 126 aa4.67□□□□□ -1.66
SMAD3-203ENST00000537194 Q96NJ1 140 aa4.66□□□□□ -1.66
SMAD3-203ENST00000537194 SS18L2Q9UHA2 77 aa4.66□□□□□ -1.66
SMAD3-203ENST00000537194 LOC110117498A0A087WWA1 95 aa4.65□□□□□ -1.67
SMAD3-203ENST00000537194 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.67
SMAD3-203ENST00000537194 IGFL1Q6UW32 110 aa4.65□□□□□ -1.67
SMAD3-203ENST00000537194 CCKP06307 115 aa4.63□□□□□ -1.67
SMAD3-203ENST00000537194 SCGB1A1P11684 91 aa4.63□□□□□ -1.67
SMAD3-203ENST00000537194 RBM3P98179 157 aaKnown RBP4.63□□□□□ -1.67
SMAD3-203ENST00000537194 TRBV7-4A0A0J9YYF1 115 aa4.62□□□□□ -1.67
SMAD3-203ENST00000537194 A0A1B0GW54 56 aa4.62□□□□□ -1.67
SMAD3-203ENST00000537194 SIGMAR1Q99720 223 aa4.62□□□□□ -1.67
SMAD3-203ENST00000537194 C14orf132Q9NPU4 83 aa4.62□□□□□ -1.67
SMAD3-203ENST00000537194 FAM236DA0A1B0GTK5 79 aa4.61□□□□□ -1.67
SMAD3-203ENST00000537194 FAM236CP0DP71 79 aa4.61□□□□□ -1.67
SMAD3-203ENST00000537194 NDUFV3P56181 108 aaKnown RBP4.61□□□□□ -1.67
SMAD3-203ENST00000537194 Q6ZQT0 140 aa4.61□□□□□ -1.67
SMAD3-203ENST00000537194 DSCR8Q96T75 97 aa4.61□□□□□ -1.67
SMAD3-203ENST00000537194 LINC00643Q86TS7 51 aa4.6□□□□□ -1.67
SMAD3-203ENST00000537194 IMUPQ9GZP8 106 aa4.6□□□□□ -1.67
SMAD3-203ENST00000537194 ATP5EP2Q5VTU8 51 aa4.59□□□□□ -1.67
SMAD3-203ENST00000537194 C20orf166-AS1Q96NR2 134 aa4.59□□□□□ -1.67
SMAD3-203ENST00000537194 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
SMAD3-203ENST00000537194 A8MUU9 505 aa4.57□□□□□ -1.68
SMAD3-203ENST00000537194 RBM12B-AS1Q9P1G2 102 aa4.57□□□□□ -1.68
SMAD3-203ENST00000537194 MT-ATP8P03928 68 aa4.56□□□□□ -1.68
SMAD3-203ENST00000537194 LINC00846Q9NV44 126 aa4.56□□□□□ -1.68
SMAD3-203ENST00000537194 A0A087WSZ3 146 aa4.55□□□□□ -1.68
SMAD3-203ENST00000537194 KRTAP3-3Q9BYR6 98 aa4.55□□□□□ -1.68
SMAD3-203ENST00000537194 KRTAP3-2Q9BYR7 98 aa4.55□□□□□ -1.68
SMAD3-203ENST00000537194 UBL5Q9BZL1 73 aa4.55□□□□□ -1.68
SMAD3-203ENST00000537194 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
SMAD3-203ENST00000537194 LINC00313P59037 77 aa4.53□□□□□ -1.68
SMAD3-203ENST00000537194 DSCR10P59022 87 aa4.52□□□□□ -1.69
SMAD3-203ENST00000537194 CXCL6P80162 114 aa4.52□□□□□ -1.69
SMAD3-203ENST00000537194 A0A1B0GV72 72 aa4.51□□□□□ -1.69
SMAD3-203ENST00000537194 IGKV4-1P06312 121 aa4.5□□□□□ -1.69
SMAD3-203ENST00000537194 PCP4P48539 62 aa4.5□□□□□ -1.69
SMAD3-203ENST00000537194 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
SMAD3-203ENST00000537194 Q6ZVQ6 151 aa4.5□□□□□ -1.69
SMAD3-203ENST00000537194 USH2AO75445 5202 aa4.49□□□□□ -1.69
SMAD3-203ENST00000537194 A0A1W2PNM2 257 aa4.48□□□□□ -1.69
SMAD3-203ENST00000537194 HIST1H4AP62805 103 aaKnown RBP4.48□□□□□ -1.69
SMAD3-203ENST00000537194 SSPOA2VEC9 5147 aa4.48□□□□□ -1.69
SMAD3-203ENST00000537194 MT2AP02795 61 aa4.47□□□□□ -1.69
SMAD3-203ENST00000537194 IGHV6-1A0A0B4J1U7 121 aa4.45□□□□□ -1.7
SMAD3-203ENST00000537194 FAM236AA0A1B0GUQ0 79 aa4.45□□□□□ -1.7
SMAD3-203ENST00000537194 FAM236BA0A1B0GV22 79 aa4.45□□□□□ -1.7
SMAD3-203ENST00000537194 NREPQ16612 68 aa4.45□□□□□ -1.7
SMAD3-203ENST00000537194 KRTAP19-1Q8IUB9 90 aa4.45□□□□□ -1.7
SMAD3-203ENST00000537194 ATOX1O00244 68 aa4.44□□□□□ -1.7
SMAD3-203ENST00000537194 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
SMAD3-203ENST00000537194 IGKV3D-7A0A0C4DH55 119 aa4.43□□□□□ -1.7
SMAD3-203ENST00000537194 C8orf87E5RJ46 101 aa4.43□□□□□ -1.7
SMAD3-203ENST00000537194 MT1FP04733 61 aa4.43□□□□□ -1.7
SMAD3-203ENST00000537194 HRES1P13985 223 aa4.43□□□□□ -1.7
SMAD3-203ENST00000537194 BPY2O14599 106 aa4.42□□□□□ -1.7
SMAD3-203ENST00000537194 ANAPC13Q9BS18 74 aa4.42□□□□□ -1.7
SMAD3-203ENST00000537194 KRTAP16-1A8MUX0 517 aa4.41□□□□□ -1.7
SMAD3-203ENST00000537194 LCE2BO14633 110 aa4.41□□□□□ -1.7
SMAD3-203ENST00000537194 DEFB116Q30KQ4 102 aa4.41□□□□□ -1.7
SMAD3-203ENST00000537194 MPLKIPQ8TAP9 179 aa4.41□□□□□ -1.7
SMAD3-203ENST00000537194 KRTAP9-3Q9BYQ3 159 aa4.41□□□□□ -1.7
SMAD3-203ENST00000537194 NOTCH2NLQ7Z3S9 236 aa4.4□□□□□ -1.71
SMAD3-203ENST00000537194 SMIM20Q8N5G0 67 aa4.4□□□□□ -1.71
SMAD3-203ENST00000537194 J3KT08 172 aa4.39□□□□□ -1.71
SMAD3-203ENST00000537194 LINC00472Q9H8W2 130 aa4.39□□□□□ -1.71
SMAD3-203ENST00000537194 A0A087WVE0 104 aa4.38□□□□□ -1.71
SMAD3-203ENST00000537194 A0A1B0GVX0 72 aa4.38□□□□□ -1.71
SMAD3-203ENST00000537194 A8MWP4 228 aa4.38□□□□□ -1.71
SMAD3-203ENST00000537194 NDUFB1O75438 58 aa4.38□□□□□ -1.71
SMAD3-203ENST00000537194 ZCCHC13Q8WW36 166 aaKnown RBP4.38□□□□□ -1.71
SMAD3-203ENST00000537194 SPINK7P58062 85 aa4.37□□□□□ -1.71
SMAD3-203ENST00000537194 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
SMAD3-203ENST00000537194 UQCRQO14949 82 aa4.36□□□□□ -1.71
SMAD3-203ENST00000537194 COX7CP15954 63 aa4.36□□□□□ -1.71
SMAD3-203ENST00000537194 SERP2Q8N6R1 65 aa4.36□□□□□ -1.71
SMAD3-203ENST00000537194 MACF1Q9UPN3 7388 aaKnown RBP4.33□□□□□ -1.72
SMAD3-203ENST00000537194 TRAV7A0A075B6U4 112 aa4.33□□□□□ -1.72
SMAD3-203ENST00000537194 K7EQZ3 153 aa4.33□□□□□ -1.72
SMAD3-203ENST00000537194 WFDC13Q8IUB5 93 aa4.33□□□□□ -1.72
SMAD3-203ENST00000537194 HCG22E2RYF7 251 aa4.32□□□□□ -1.72
SMAD3-203ENST00000537194 KRTAP19-6Q3LI70 58 aa4.32□□□□□ -1.72
SMAD3-203ENST00000537194 PRR15Q8IV56 129 aa4.32□□□□□ -1.72
SMAD3-203ENST00000537194 Q8N9L7 120 aa4.31□□□□□ -1.72
SMAD3-203ENST00000537194 OCR1Q9BZK8 76 aa4.3□□□□□ -1.72
SMAD3-203ENST00000537194 CCDC179H3BU77 68 aa4.29□□□□□ -1.72
SMAD3-203ENST00000537194 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
SMAD3-203ENST00000537194 KLKP1Q107X0 134 aa4.28□□□□□ -1.72
SMAD3-203ENST00000537194 C8orf17Q9NRJ1 99 aa4.28□□□□□ -1.72
SMAD3-203ENST00000537194 MMP24-AS1A0A0U1RRL7 71 aa4.27□□□□□ -1.73
SMAD3-203ENST00000537194 NDUFC1O43677 76 aa4.25□□□□□ -1.73
SMAD3-203ENST00000537194 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
SMAD3-203ENST00000537194 H1FX-AS1Q4G0G2 97 aa4.25□□□□□ -1.73
SMAD3-203ENST00000537194 CASC2Q6XLA1 102 aa4.25□□□□□ -1.73
SMAD3-203ENST00000537194 TMEM254Q8TBM7 123 aa4.24□□□□□ -1.73
SMAD3-203ENST00000537194 hDV103S1A0JD37 113 aa4.23□□□□□ -1.73
SMAD3-203ENST00000537194 H3BPC8 53 aa4.23□□□□□ -1.73
SMAD3-203ENST00000537194 NDUFS5O43920 106 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms