RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TP53AIP1Q9HCN2 124 aa7.88□□□□□ -1.15
VPS33B-202ENST00000535906 A0A1B0GVX0 72 aa7.87□□□□□ -1.15
VPS33B-202ENST00000535906 Q1T7F1 81 aa7.86□□□□□ -1.15
VPS33B-202ENST00000535906 PRO0628Q9UI54 55 aa7.86□□□□□ -1.15
VPS33B-202ENST00000535906 IGHV6-1A0A0B4J1U7 121 aa7.85□□□□□ -1.15
VPS33B-202ENST00000535906 VPS13BQ7Z7G8 4022 aa7.85□□□□□ -1.15
VPS33B-202ENST00000535906 SACSQ9NZJ4 4579 aa7.85□□□□□ -1.15
VPS33B-202ENST00000535906 CDK2AP2O75956 126 aa7.84□□□□□ -1.15
VPS33B-202ENST00000535906 A0A087X002 238 aa7.84□□□□□ -1.15
VPS33B-202ENST00000535906 PKHD1P08F94 4074 aa7.84□□□□□ -1.15
VPS33B-202ENST00000535906 SSBP3-AS1Q7Z2R9 100 aa7.83□□□□□ -1.16
VPS33B-202ENST00000535906 CD164Q04900 197 aa7.81□□□□□ -1.16
VPS33B-202ENST00000535906 KRTAP13-2Q52LG2 175 aa7.81□□□□□ -1.16
VPS33B-202ENST00000535906 NOTCH2NLQ7Z3S9 236 aa7.81□□□□□ -1.16
VPS33B-202ENST00000535906 SPINK6Q6UWN8 80 aa7.81□□□□□ -1.16
VPS33B-202ENST00000535906 MRPL34Q9BQ48 92 aaKnown RBP7.81□□□□□ -1.16
VPS33B-202ENST00000535906 BRK1Q8WUW1 75 aa7.79□□□□□ -1.16
VPS33B-202ENST00000535906 IGLV7-46A0A075B6I9 117 aa7.79□□□□□ -1.16
VPS33B-202ENST00000535906 NDUFS5O43920 106 aa7.79□□□□□ -1.16
VPS33B-202ENST00000535906 KRTAP1-4P0C5Y4 121 aa7.77□□□□□ -1.17
VPS33B-202ENST00000535906 V9GYY9 64 aa7.76□□□□□ -1.17
VPS33B-202ENST00000535906 PCOTHQ58A44 107 aa7.75□□□□□ -1.17
VPS33B-202ENST00000535906 PSPHP1O15172 72 aa7.72□□□□□ -1.17
VPS33B-202ENST00000535906 COA5Q86WW8 74 aa7.71□□□□□ -1.18
VPS33B-202ENST00000535906 PLA2G1BP04054 148 aaKnown RBP7.7□□□□□ -1.18
VPS33B-202ENST00000535906 C1orf195Q5TG92 126 aa7.7□□□□□ -1.18
VPS33B-202ENST00000535906 Q8N9P0 234 aaPredicted RBP7.7□□□□□ -1.18
VPS33B-202ENST00000535906 DYNC1H1Q14204 4646 aaKnown RBP7.68□□□□□ -1.18
VPS33B-202ENST00000535906 A8MUN3 132 aa7.68□□□□□ -1.18
VPS33B-202ENST00000535906 C8orf87E5RJ46 101 aa7.68□□□□□ -1.18
VPS33B-202ENST00000535906 LIMD2Q9BT23 127 aa7.67□□□□□ -1.18
VPS33B-202ENST00000535906 KRTAP13-3Q3SY46 172 aa7.67□□□□□ -1.18
VPS33B-202ENST00000535906 LOC101927531A0A1B0GV80 90 aa7.66□□□□□ -1.18
VPS33B-202ENST00000535906 A0A1B0GVY2 172 aa7.66□□□□□ -1.18
VPS33B-202ENST00000535906 Q5W150 140 aa7.66□□□□□ -1.18
VPS33B-202ENST00000535906 SMR3BP02814 79 aaPredicted RBP7.65□□□□□ -1.18
VPS33B-202ENST00000535906 Q5VV11 94 aa7.64□□□□□ -1.19
VPS33B-202ENST00000535906 TYMSOSQ8TAI1 123 aa7.64□□□□□ -1.19
VPS33B-202ENST00000535906 LINC00313P59037 77 aa7.63□□□□□ -1.19
VPS33B-202ENST00000535906 RYR2Q92736 4967 aa7.62□□□□□ -1.19
VPS33B-202ENST00000535906 KMT2CQ8NEZ4 4911 aaKnown RBP7.61□□□□□ -1.19
VPS33B-202ENST00000535906 C4orf48Q5BLP8 95 aa7.6□□□□□ -1.19
VPS33B-202ENST00000535906 APOBP04114 4563 aaKnown RBP7.6□□□□□ -1.19
VPS33B-202ENST00000535906 FAT1Q14517 4588 aa7.6□□□□□ -1.19
VPS33B-202ENST00000535906 HRES1P13985 223 aa7.6□□□□□ -1.19
VPS33B-202ENST00000535906 PRR26Q8N8Z3 221 aa7.6□□□□□ -1.19
VPS33B-202ENST00000535906 PRR15LQ9BU68 103 aa7.6□□□□□ -1.19
VPS33B-202ENST00000535906 SPINK1P00995 79 aa7.58□□□□□ -1.2
VPS33B-202ENST00000535906 KRTAP16-1A8MUX0 517 aa7.56□□□□□ -1.2
VPS33B-202ENST00000535906 FAM229AH3BQW9 127 aa7.56□□□□□ -1.2
VPS33B-202ENST00000535906 CHKB-CPT1BH3BT56 60 aa7.56□□□□□ -1.2
VPS33B-202ENST00000535906 KRTAP10-4P60372 401 aaPredicted RBP7.56□□□□□ -1.2
VPS33B-202ENST00000535906 Q75L30 129 aa7.55□□□□□ -1.2
VPS33B-202ENST00000535906 LINC01558Q9Y6Z2 57 aa7.54□□□□□ -1.2
VPS33B-202ENST00000535906 SPAG11AQ6PDA7 123 aa7.53□□□□□ -1.2
VPS33B-202ENST00000535906 LINC00304Q8N9R0 145 aa7.53□□□□□ -1.2
VPS33B-202ENST00000535906 RETNLBQ9BQ08 111 aa7.52□□□□□ -1.2
VPS33B-202ENST00000535906 ACYP2P14621 99 aa7.5□□□□□ -1.21
VPS33B-202ENST00000535906 IGKV2-30P06310 120 aa7.49□□□□□ -1.21
VPS33B-202ENST00000535906 A8MU10 97 aa7.48□□□□□ -1.21
VPS33B-202ENST00000535906 RPS29P62273 56 aaKnown RBP7.48□□□□□ -1.21
VPS33B-202ENST00000535906 DMAC1Q96GE9 116 aa7.48□□□□□ -1.21
VPS33B-202ENST00000535906 A6NED7 52 aa7.46□□□□□ -1.22
VPS33B-202ENST00000535906 PKHD1L1Q86WI1 4243 aa7.46□□□□□ -1.22
VPS33B-202ENST00000535906 LCA10Q71F78 164 aa7.43□□□□□ -1.22
VPS33B-202ENST00000535906 SEC61GP60059 68 aa7.39□□□□□ -1.23
VPS33B-202ENST00000535906 CDC42SE1Q9NRR8 79 aa7.39□□□□□ -1.23
VPS33B-202ENST00000535906 RYR3Q15413 4870 aa7.38□□□□□ -1.23
VPS33B-202ENST00000535906 IGKV2D-30A0A075B6S6 120 aa7.38□□□□□ -1.23
VPS33B-202ENST00000535906 ATP11AUNQ6ZP68 121 aa7.38□□□□□ -1.23
VPS33B-202ENST00000535906 PMAIP1Q13794 54 aa7.37□□□□□ -1.23
VPS33B-202ENST00000535906 SPINK7P58062 85 aa7.36□□□□□ -1.23
VPS33B-202ENST00000535906 SPTSSBQ8NFR3 76 aa7.35□□□□□ -1.23
VPS33B-202ENST00000535906 HSPG2P98160 4391 aa7.34□□□□□ -1.23
VPS33B-202ENST00000535906 C9orf92A6NGG3 77 aa7.34□□□□□ -1.23
VPS33B-202ENST00000535906 LRP1Q07954 4544 aaKnown RBP7.33□□□□□ -1.24
VPS33B-202ENST00000535906 FLG2Q5D862 2391 aaPredicted RBP7.31□□□□□ -1.24
VPS33B-202ENST00000535906 Q5VSD8 79 aa7.29□□□□□ -1.24
VPS33B-202ENST00000535906 C7orf65Q6ZTY9 151 aa7.29□□□□□ -1.24
VPS33B-202ENST00000535906 TNXBP22105 4242 aa7.29□□□□□ -1.24
VPS33B-202ENST00000535906 Q8N1X5 172 aa7.28□□□□□ -1.24
VPS33B-202ENST00000535906 C20orf166-AS1Q96NR2 134 aa7.28□□□□□ -1.24
VPS33B-202ENST00000535906 A8MUU9 505 aa7.27□□□□□ -1.25
VPS33B-202ENST00000535906 A0A1B0GU69 56 aa7.27□□□□□ -1.25
VPS33B-202ENST00000535906 KRTAP17-1Q9BYP8 105 aa7.26□□□□□ -1.25
VPS33B-202ENST00000535906 A6NN06 94 aa7.25□□□□□ -1.25
VPS33B-202ENST00000535906 RYR1P21817 5038 aa7.25□□□□□ -1.25
VPS33B-202ENST00000535906 KRTAP10-8P60410 259 aa7.25□□□□□ -1.25
VPS33B-202ENST00000535906 FAT3Q8TDW7 4589 aa7.22□□□□□ -1.25
VPS33B-202ENST00000535906 KTN1-AS1Q86SY8 53 aa7.21□□□□□ -1.26
VPS33B-202ENST00000535906 KIAA1109Q2LD37 5005 aa7.19□□□□□ -1.26
VPS33B-202ENST00000535906 DMBT1Q9UGM3 2413 aaPredicted RBP7.17□□□□□ -1.26
VPS33B-202ENST00000535906 SPATA8Q6RVD6 105 aa7.15□□□□□ -1.26
VPS33B-202ENST00000535906 MYCBP2O75592 4640 aa7.14□□□□□ -1.27
VPS33B-202ENST00000535906 UQCR11O14957 56 aa7.14□□□□□ -1.27
VPS33B-202ENST00000535906 EPPK1P58107 5090 aaKnown RBP7.11□□□□□ -1.27
VPS33B-202ENST00000535906 MIR22HGQ0VDD5 57 aa7.11□□□□□ -1.27
VPS33B-202ENST00000535906 MT1HL1P0DM35 61 aa7.08□□□□□ -1.28
VPS33B-202ENST00000535906 KRTAP3-1Q9BYR8 98 aa7.08□□□□□ -1.28
VPS33B-202ENST00000535906 XP32Q5T750 250 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms