RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 FLG2Q5D862 2391 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF1A-205ENST00000534885 C4orf48Q5BLP8 95 aa11.71□□□□□ -0.53
TNFRSF1A-205ENST00000534885 LINC00304Q8N9R0 145 aa11.71□□□□□ -0.53
TNFRSF1A-205ENST00000534885 FAM236DA0A1B0GTK5 79 aa11.69□□□□□ -0.54
TNFRSF1A-205ENST00000534885 IGKV4-1P06312 121 aa11.69□□□□□ -0.54
TNFRSF1A-205ENST00000534885 FAM236CP0DP71 79 aa11.69□□□□□ -0.54
TNFRSF1A-205ENST00000534885 KLKP1Q107X0 134 aa11.69□□□□□ -0.54
TNFRSF1A-205ENST00000534885 K7EQZ3 153 aa11.68□□□□□ -0.54
TNFRSF1A-205ENST00000534885 SPINK1P00995 79 aa11.67□□□□□ -0.54
TNFRSF1A-205ENST00000534885 C1orf195Q5TG92 126 aa11.67□□□□□ -0.54
TNFRSF1A-205ENST00000534885 SMIM26A0A096LP01 95 aa11.66□□□□□ -0.54
TNFRSF1A-205ENST00000534885 H7BZZ5 65 aa11.66□□□□□ -0.54
TNFRSF1A-205ENST00000534885 KRTAP4-5Q9BYR2 181 aa11.66□□□□□ -0.54
TNFRSF1A-205ENST00000534885 TNXBP22105 4242 aa11.65□□□□□ -0.54
TNFRSF1A-205ENST00000534885 MYCBP2O75592 4640 aa11.65□□□□□ -0.55
TNFRSF1A-205ENST00000534885 ASB16-AS1Q495Z4 193 aa11.64□□□□□ -0.55
TNFRSF1A-205ENST00000534885 BIRC6Q9NR09 4857 aa11.64□□□□□ -0.55
TNFRSF1A-205ENST00000534885 LIMD2Q9BT23 127 aa11.64□□□□□ -0.55
TNFRSF1A-205ENST00000534885 FAT3Q8TDW7 4589 aa11.64□□□□□ -0.55
TNFRSF1A-205ENST00000534885 SPAG11AQ6PDA7 123 aa11.63□□□□□ -0.55
TNFRSF1A-205ENST00000534885 SNURFQ9Y675 71 aa11.63□□□□□ -0.55
TNFRSF1A-205ENST00000534885 A8MWP4 228 aa11.61□□□□□ -0.55
TNFRSF1A-205ENST00000534885 KRTAP10-8P60410 259 aa11.61□□□□□ -0.55
TNFRSF1A-205ENST00000534885 RPS29P62273 56 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-205ENST00000534885 PRR15Q8IV56 129 aa11.58□□□□□ -0.56
TNFRSF1A-205ENST00000534885 NDUFC1O43677 76 aa11.57□□□□□ -0.56
TNFRSF1A-205ENST00000534885 OCR1Q9BZK8 76 aa11.55□□□□□ -0.56
TNFRSF1A-205ENST00000534885 NDUFB1O75438 58 aa11.53□□□□□ -0.56
TNFRSF1A-205ENST00000534885 TMEM254Q8TBM7 123 aa11.53□□□□□ -0.56
TNFRSF1A-205ENST00000534885 MT1HL1P0DM35 61 aa11.51□□□□□ -0.57
TNFRSF1A-205ENST00000534885 A0A1B0GVX0 72 aa11.51□□□□□ -0.57
TNFRSF1A-205ENST00000534885 FP248Q71RG6 208 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-205ENST00000534885 ATP5EP56381 51 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-205ENST00000534885 HERC2O95714 4834 aa11.5□□□□□ -0.57
TNFRSF1A-205ENST00000534885 IGHV6-1A0A0B4J1U7 121 aa11.5□□□□□ -0.57
TNFRSF1A-205ENST00000534885 HCG22E2RYF7 251 aa11.49□□□□□ -0.57
TNFRSF1A-205ENST00000534885 BRK1Q8WUW1 75 aa11.48□□□□□ -0.57
TNFRSF1A-205ENST00000534885 DMBT1Q9UGM3 2413 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-205ENST00000534885 WFDC13Q8IUB5 93 aa11.47□□□□□ -0.57
TNFRSF1A-205ENST00000534885 A0A0U1RQV1 116 aa11.47□□□□□ -0.57
TNFRSF1A-205ENST00000534885 NOTCH2NLQ7Z3S9 236 aa11.46□□□□□ -0.57
TNFRSF1A-205ENST00000534885 MMP24-AS1A0A0U1RRL7 71 aa11.45□□□□□ -0.58
TNFRSF1A-205ENST00000534885 ABCA13Q86UQ4 5058 aa11.45□□□□□ -0.58
TNFRSF1A-205ENST00000534885 C8orf17Q9NRJ1 99 aa11.44□□□□□ -0.58
TNFRSF1A-205ENST00000534885 RETNLBQ9BQ08 111 aa11.44□□□□□ -0.58
TNFRSF1A-205ENST00000534885 KRTAP29-1A8MX34 341 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF1A-205ENST00000534885 CASC2Q6XLA1 102 aa11.42□□□□□ -0.58
TNFRSF1A-205ENST00000534885 hDV103S1A0JD37 113 aa11.38□□□□□ -0.59
TNFRSF1A-205ENST00000534885 PMAIP1Q13794 54 aa11.36□□□□□ -0.59
TNFRSF1A-205ENST00000534885 LINC00313P59037 77 aa11.34□□□□□ -0.59
TNFRSF1A-205ENST00000534885 C8orf87E5RJ46 101 aa11.33□□□□□ -0.6
TNFRSF1A-205ENST00000534885 MRPL34Q9BQ48 92 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-205ENST00000534885 ZCCHC13Q8WW36 166 aaKnown RBP11.26□□□□□ -0.61
TNFRSF1A-205ENST00000534885 KRTAP16-1A8MUX0 517 aa11.25□□□□□ -0.61
TNFRSF1A-205ENST00000534885 C9orf92A6NGG3 77 aa11.23□□□□□ -0.61
TNFRSF1A-205ENST00000534885 NDUFS5O43920 106 aa11.22□□□□□ -0.61
TNFRSF1A-205ENST00000534885 J3QL48 77 aa11.2□□□□□ -0.62
TNFRSF1A-205ENST00000534885 Q8N9P0 234 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF1A-205ENST00000534885 MPLKIPQ8TAP9 179 aa11.17□□□□□ -0.62
TNFRSF1A-205ENST00000534885 IGLV7-46A0A075B6I9 117 aa11.15□□□□□ -0.62
TNFRSF1A-205ENST00000534885 PCLOQ9Y6V0 5065 aa11.14□□□□□ -0.63
TNFRSF1A-205ENST00000534885 TP53AIP1Q9HCN2 124 aa11.13□□□□□ -0.63
TNFRSF1A-205ENST00000534885 MP68P56378 58 aa11.12□□□□□ -0.63
TNFRSF1A-205ENST00000534885 PRR4Q16378 134 aa11.12□□□□□ -0.63
TNFRSF1A-205ENST00000534885 TRAV22A0A0B4J277 110 aa11.07□□□□□ -0.64
TNFRSF1A-205ENST00000534885 Q1T7F1 81 aa11.07□□□□□ -0.64
TNFRSF1A-205ENST00000534885 C1orf64Q8NEQ6 169 aa11.07□□□□□ -0.64
TNFRSF1A-205ENST00000534885 CYP4F30PQ9H0H9 118 aa11.07□□□□□ -0.64
TNFRSF1A-205ENST00000534885 H0Y9P7 68 aa11.07□□□□□ -0.64
TNFRSF1A-205ENST00000534885 Q5W150 140 aa11.07□□□□□ -0.64
TNFRSF1A-205ENST00000534885 KRTAP13-3Q3SY46 172 aa11.06□□□□□ -0.64
TNFRSF1A-205ENST00000534885 LINC00208Q96KT6 92 aa11.05□□□□□ -0.64
TNFRSF1A-205ENST00000534885 H3BPC8 53 aa11.04□□□□□ -0.64
TNFRSF1A-205ENST00000534885 C20orf166-AS1Q96NR2 134 aa11.04□□□□□ -0.64
TNFRSF1A-205ENST00000534885 A8MUU9 505 aa11.02□□□□□ -0.64
TNFRSF1A-205ENST00000534885 XP32Q5T750 250 aa10.96□□□□□ -0.65
TNFRSF1A-205ENST00000534885 SPANXA2-OT1Q8N9U9 137 aa10.96□□□□□ -0.66
TNFRSF1A-205ENST00000534885 TPRXLQ17RH7 258 aa10.95□□□□□ -0.66
TNFRSF1A-205ENST00000534885 Q75L30 129 aa10.94□□□□□ -0.66
TNFRSF1A-205ENST00000534885 LPAP08519 4548 aa10.94□□□□□ -0.66
TNFRSF1A-205ENST00000534885 KTN1-AS1Q86SY8 53 aa10.91□□□□□ -0.66
TNFRSF1A-205ENST00000534885 RPL37P61927 97 aaKnown RBP10.86□□□□□ -0.67
TNFRSF1A-205ENST00000534885 RBM12B-AS1Q9P1G2 102 aa10.86□□□□□ -0.67
TNFRSF1A-205ENST00000534885 HERC1Q15751 4861 aa10.86□□□□□ -0.67
TNFRSF1A-205ENST00000534885 LOC101927531A0A1B0GV80 90 aa10.85□□□□□ -0.67
TNFRSF1A-205ENST00000534885 LRP2P98164 4655 aa10.84□□□□□ -0.67
TNFRSF1A-205ENST00000534885 IGKV2-30P06310 120 aa10.82□□□□□ -0.68
TNFRSF1A-205ENST00000534885 IGKV2D-30A0A075B6S6 120 aa10.8□□□□□ -0.68
TNFRSF1A-205ENST00000534885 PCOTHQ58A44 107 aa10.8□□□□□ -0.68
TNFRSF1A-205ENST00000534885 ATP11AUNQ6ZP68 121 aa10.8□□□□□ -0.68
TNFRSF1A-205ENST00000534885 PSPHP1O15172 72 aa10.78□□□□□ -0.68
TNFRSF1A-205ENST00000534885 C7orf65Q6ZTY9 151 aa10.72□□□□□ -0.69
TNFRSF1A-205ENST00000534885 COA5Q86WW8 74 aa10.7□□□□□ -0.7
TNFRSF1A-205ENST00000534885 A8MUN3 132 aa10.69□□□□□ -0.7
TNFRSF1A-205ENST00000534885 SPINK7P58062 85 aa10.68□□□□□ -0.7
TNFRSF1A-205ENST00000534885 Q5VV11 94 aa10.68□□□□□ -0.7
TNFRSF1A-205ENST00000534885 HMCN2Q8NDA2 5059 aa10.66□□□□□ -0.7
TNFRSF1A-205ENST00000534885 HRES1P13985 223 aa10.64□□□□□ -0.71
TNFRSF1A-205ENST00000534885 CHKB-CPT1BH3BT56 60 aa10.61□□□□□ -0.71
TNFRSF1A-205ENST00000534885 A6NN06 94 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms