RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 RGPD1P0DJD0 1748 aa-2.21□□□□□ -2.76
COPB1-212ENST00000534771 ALKAL2Q6UX46 152 aa-2.21□□□□□ -2.76
COPB1-212ENST00000534771 GAFA1Q96PS6 74 aa-2.21□□□□□ -2.76
COPB1-212ENST00000534771 MYOM2P54296 1465 aa-2.21□□□□□ -2.76
COPB1-212ENST00000534771 NRKQ7Z2Y5 1582 aa-2.22□□□□□ -2.76
COPB1-212ENST00000534771 H3BQ15 152 aa-2.22□□□□□ -2.76
COPB1-212ENST00000534771 ACYP1P07311 99 aa-2.22□□□□□ -2.76
COPB1-212ENST00000534771 AKAIN1P0CW23 69 aa-2.22□□□□□ -2.76
COPB1-212ENST00000534771 hADV29S1A0JD25 119 aa-2.23□□□□□ -2.77
COPB1-212ENST00000534771 NDUFC1O43677 76 aa-2.23□□□□□ -2.77
COPB1-212ENST00000534771 LEPROTL1O95214 131 aa-2.23□□□□□ -2.77
COPB1-212ENST00000534771 MPC2O95563 127 aa-2.23□□□□□ -2.77
COPB1-212ENST00000534771 S100PP25815 95 aa-2.23□□□□□ -2.77
COPB1-212ENST00000534771 RPS27P42677 84 aaKnown RBP-2.23□□□□□ -2.77
COPB1-212ENST00000534771 HMGN3Q15651 99 aa-2.23□□□□□ -2.77
COPB1-212ENST00000534771 RPS27LQ71UM5 84 aaKnown RBP-2.23□□□□□ -2.77
COPB1-212ENST00000534771 SVBPQ8N300 66 aa-2.23□□□□□ -2.77
COPB1-212ENST00000534771 LRRIQ1Q96JM4 1722 aa-2.23□□□□□ -2.77
COPB1-212ENST00000534771 ABCA3Q99758 1704 aa-2.23□□□□□ -2.77
COPB1-212ENST00000534771 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.23□□□□□ -2.77
COPB1-212ENST00000534771 NRXN1Q9ULB1 1477 aa-2.24□□□□□ -2.77
COPB1-212ENST00000534771 ETDBQ3ZM63 59 aa-2.24□□□□□ -2.77
COPB1-212ENST00000534771 IQCF6A8MYZ5 107 aa-2.25□□□□□ -2.77
COPB1-212ENST00000534771 CD163L1Q9NR16 1453 aa-2.26□□□□□ -2.77
COPB1-212ENST00000534771 CLASP1Q7Z460 1538 aa-2.26□□□□□ -2.77
COPB1-212ENST00000534771 LTN1O94822 1766 aa-2.27□□□□□ -2.77
COPB1-212ENST00000534771 A0A1B0GUT8 65 aa-2.27□□□□□ -2.77
COPB1-212ENST00000534771 SNAPC5O75971 98 aa-2.27□□□□□ -2.77
COPB1-212ENST00000534771 MRPS10P82664 201 aaKnown RBP-2.27□□□□□ -2.77
COPB1-212ENST00000534771 ZNF720Q7Z2F6 126 aa-2.27□□□□□ -2.77
COPB1-212ENST00000534771 H3BUA1 57 aa-2.28□□□□□ -2.77
COPB1-212ENST00000534771 BVES-AS1Q5T3Y7 98 aa-2.29□□□□□ -2.78
COPB1-212ENST00000534771 NCBP2-AS2Q69YL0 99 aa-2.29□□□□□ -2.78
COPB1-212ENST00000534771 IER3IP1Q9Y5U9 82 aa-2.29□□□□□ -2.78
COPB1-212ENST00000534771 NEXMIFQ5QGS0 1516 aa-2.29□□□□□ -2.78
COPB1-212ENST00000534771 DDX60LQ5H9U9 1706 aaKnown RBP-2.29□□□□□ -2.78
COPB1-212ENST00000534771 TJP1Q07157 1748 aa-2.3□□□□□ -2.78
COPB1-212ENST00000534771 KIF14Q15058 1648 aa-2.3□□□□□ -2.78
COPB1-212ENST00000534771 PREX2Q70Z35 1606 aa-2.3□□□□□ -2.78
COPB1-212ENST00000534771 KIAA0586Q9BVV6 1533 aa-2.3□□□□□ -2.78
COPB1-212ENST00000534771 CLTCQ00610 1675 aaKnown RBP-2.31□□□□□ -2.78
COPB1-212ENST00000534771 MAP3K4Q9Y6R4 1608 aa-2.31□□□□□ -2.78
COPB1-212ENST00000534771 MYH4Q9Y623 1939 aa-2.31□□□□□ -2.78
COPB1-212ENST00000534771 NALCNQ8IZF0 1738 aa-2.31□□□□□ -2.78
COPB1-212ENST00000534771 NHSQ6T4R5 1651 aa-2.31□□□□□ -2.78
COPB1-212ENST00000534771 SFTA3P0C7M3 94 aa-2.32□□□□□ -2.78
COPB1-212ENST00000534771 ITSN1Q15811 1721 aa-2.33□□□□□ -2.78
COPB1-212ENST00000534771 TRAV21A0A0B4J279 112 aa-2.33□□□□□ -2.78
COPB1-212ENST00000534771 GNGT2O14610 69 aa-2.33□□□□□ -2.78
COPB1-212ENST00000534771 CYB5AP00167 134 aa-2.33□□□□□ -2.78
COPB1-212ENST00000534771 PLGLAQ15195 96 aa-2.33□□□□□ -2.78
COPB1-212ENST00000534771 PZPP20742 1482 aa-2.33□□□□□ -2.78
COPB1-212ENST00000534771 ANKRD26Q9UPS8 1709 aa-2.34□□□□□ -2.78
COPB1-212ENST00000534771 HMGA1P17096 107 aaKnown RBP-2.34□□□□□ -2.78
COPB1-212ENST00000534771 GNG4P50150 75 aa-2.34□□□□□ -2.78
COPB1-212ENST00000534771 PPP3R1P63098 170 aa-2.34□□□□□ -2.78
COPB1-212ENST00000534771 DIP2BQ9P265 1576 aa-2.35□□□□□ -2.79
COPB1-212ENST00000534771 ATOX1O00244 68 aa-2.35□□□□□ -2.79
COPB1-212ENST00000534771 CCDC58Q4VC31 144 aa-2.35□□□□□ -2.79
COPB1-212ENST00000534771 DEFB104AQ8WTQ1 72 aa-2.35□□□□□ -2.79
COPB1-212ENST00000534771 PMCHL2Q9BQD1 86 aa-2.35□□□□□ -2.79
COPB1-212ENST00000534771 RICTORQ6R327 1708 aa-2.35□□□□□ -2.79
COPB1-212ENST00000534771 LMO7Q8WWI1 1683 aa-2.35□□□□□ -2.79
COPB1-212ENST00000534771 FAM208AQ9UK61 1670 aaKnown RBP-2.35□□□□□ -2.79
COPB1-212ENST00000534771 EPRSP07814 1512 aaKnown RBP-2.36□□□□□ -2.79
COPB1-212ENST00000534771 UQCRHLA0A096LP55 91 aa-2.36□□□□□ -2.79
COPB1-212ENST00000534771 UACAQ9BZF9 1416 aa-2.36□□□□□ -2.79
COPB1-212ENST00000534771 POLR2KP53803 58 aaKnown RBP-2.37□□□□□ -2.79
COPB1-212ENST00000534771 PPLO60437 1756 aa-2.37□□□□□ -2.79
COPB1-212ENST00000534771 ROCK2O75116 1388 aaKnown RBP-2.37□□□□□ -2.79
COPB1-212ENST00000534771 CCNB3Q8WWL7 1395 aa-2.37□□□□□ -2.79
COPB1-212ENST00000534771 FANCAO15360 1455 aa-2.38□□□□□ -2.79
COPB1-212ENST00000534771 NDUFA2O43678 99 aa-2.38□□□□□ -2.79
COPB1-212ENST00000534771 DEFB133Q30KQ1 61 aa-2.38□□□□□ -2.79
COPB1-212ENST00000534771 MINOS1Q5TGZ0 78 aa-2.38□□□□□ -2.79
COPB1-212ENST00000534771 NRAPQ86VF7 1730 aa-2.39□□□□□ -2.79
COPB1-212ENST00000534771 NDUFB1O75438 58 aa-2.39□□□□□ -2.79
COPB1-212ENST00000534771 FCER1GP30273 86 aa-2.39□□□□□ -2.79
COPB1-212ENST00000534771 C6orf48Q9UBA6 75 aa-2.39□□□□□ -2.79
COPB1-212ENST00000534771 CCDC180Q9P1Z9 1646 aa-2.39□□□□□ -2.79
COPB1-212ENST00000534771 CCDC88BA6NC98 1476 aa-2.39□□□□□ -2.79
COPB1-212ENST00000534771 HMGN2P05204 90 aaKnown RBP-2.4□□□□□ -2.79
COPB1-212ENST00000534771 RPL13AP3Q6NVV1 102 aa-2.4□□□□□ -2.79
COPB1-212ENST00000534771 ARFGEF2Q9Y6D5 1785 aa-2.41□□□□□ -2.79
COPB1-212ENST00000534771 TSC22D3Q99576 134 aa-2.41□□□□□ -2.8
COPB1-212ENST00000534771 MYO3AQ8NEV4 1616 aa-2.42□□□□□ -2.8
COPB1-212ENST00000534771 CD52P31358 61 aa-2.42□□□□□ -2.8
COPB1-212ENST00000534771 COL5A1-AS1Q5SY13 56 aa-2.42□□□□□ -2.8
COPB1-212ENST00000534771 RNF17Q9BXT8 1623 aaKnown RBP-2.42□□□□□ -2.8
COPB1-212ENST00000534771 INO80Q9ULG1 1556 aaPredicted RBP-2.43□□□□□ -2.8
COPB1-212ENST00000534771 DEFB131BA0A096LNP1 70 aa-2.43□□□□□ -2.8
COPB1-212ENST00000534771 CORTO00230 105 aa-2.43□□□□□ -2.8
COPB1-212ENST00000534771 S100A1P23297 94 aa-2.43□□□□□ -2.8
COPB1-212ENST00000534771 IFI27P40305 119 aaPredicted RBP-2.43□□□□□ -2.8
COPB1-212ENST00000534771 GTF2H5Q6ZYL4 71 aa-2.43□□□□□ -2.8
COPB1-212ENST00000534771 ACBD7Q8N6N7 88 aa-2.43□□□□□ -2.8
COPB1-212ENST00000534771 KAAG1Q9UBP8 84 aa-2.43□□□□□ -2.8
COPB1-212ENST00000534771 NDUFA4O00483 81 aa-2.44□□□□□ -2.8
COPB1-212ENST00000534771 CRIP1P50238 77 aa-2.44□□□□□ -2.8
COPB1-212ENST00000534771 TMEM203Q969S6 136 aa-2.44□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms