RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 KRTAP15-1Q3LI76 137 aa2.01□□□□□ -2.09
SOX6-217ENST00000533870 MGAQ8IWI9 3026 aa2.01□□□□□ -2.09
SOX6-217ENST00000533870 HTTP42858 3142 aa2□□□□□ -2.09
SOX6-217ENST00000533870 C10orf95Q9H7T3 257 aa2□□□□□ -2.09
SOX6-217ENST00000533870 INE1O15225 51 aa1.98□□□□□ -2.09
SOX6-217ENST00000533870 TENM2Q9NT68 2774 aa1.98□□□□□ -2.09
SOX6-217ENST00000533870 MXRA5Q9NR99 2828 aa1.98□□□□□ -2.09
SOX6-217ENST00000533870 HERC1Q15751 4861 aa1.97□□□□□ -2.09
SOX6-217ENST00000533870 TGP01266 2768 aa1.97□□□□□ -2.09
SOX6-217ENST00000533870 A0A1B0GVY2 172 aa1.96□□□□□ -2.1
SOX6-217ENST00000533870 PRO2289Q9P1D8 64 aa1.96□□□□□ -2.1
SOX6-217ENST00000533870 PCLOQ9Y6V0 5065 aa1.96□□□□□ -2.1
SOX6-217ENST00000533870 HRNRQ86YZ3 2850 aaPredicted RBP1.96□□□□□ -2.1
SOX6-217ENST00000533870 PDZD2O15018 2839 aa1.96□□□□□ -2.1
SOX6-217ENST00000533870 KRTAP12-2P59991 146 aa1.95□□□□□ -2.1
SOX6-217ENST00000533870 KALRNO60229 2985 aa1.94□□□□□ -2.1
SOX6-217ENST00000533870 DCHS2Q6V1P9 2916 aa1.94□□□□□ -2.1
SOX6-217ENST00000533870 TACC2O95359 2948 aa1.94□□□□□ -2.1
SOX6-217ENST00000533870 NBEAQ8NFP9 2946 aa1.93□□□□□ -2.1
SOX6-217ENST00000533870 NF1P21359 2839 aa1.93□□□□□ -2.1
SOX6-217ENST00000533870 ATMQ13315 3056 aa1.93□□□□□ -2.1
SOX6-217ENST00000533870 CELSR2Q9HCU4 2923 aa1.92□□□□□ -2.1
SOX6-217ENST00000533870 SRCAPQ6ZRS2 3230 aa1.91□□□□□ -2.1
SOX6-217ENST00000533870 KRTAP10-4P60372 401 aaPredicted RBP1.91□□□□□ -2.1
SOX6-217ENST00000533870 KRTAP19-4Q3LI73 84 aa1.9□□□□□ -2.1
SOX6-217ENST00000533870 KMT2CQ8NEZ4 4911 aaKnown RBP1.89□□□□□ -2.11
SOX6-217ENST00000533870 A0A0C4DFX4 3053 aa1.89□□□□□ -2.11
SOX6-217ENST00000533870 LRBAP50851 2863 aa1.87□□□□□ -2.11
SOX6-217ENST00000533870 RANBP2P49792 3224 aaKnown RBP1.87□□□□□ -2.11
SOX6-217ENST00000533870 M0R2T5 61 aa1.87□□□□□ -2.11
SOX6-217ENST00000533870 FRYQ5TBA9 3013 aa1.87□□□□□ -2.11
SOX6-217ENST00000533870 FBN3Q75N90 2809 aa1.87□□□□□ -2.11
SOX6-217ENST00000533870 CFAP54Q96N23 3096 aa1.87□□□□□ -2.11
SOX6-217ENST00000533870 VWFP04275 2813 aa1.87□□□□□ -2.11
SOX6-217ENST00000533870 ZZEF1O43149 2961 aa1.87□□□□□ -2.11
SOX6-217ENST00000533870 RYR2Q92736 4967 aa1.86□□□□□ -2.11
SOX6-217ENST00000533870 COL12A1Q99715 3063 aa1.86□□□□□ -2.11
SOX6-217ENST00000533870 CEP350Q5VT06 3117 aa1.86□□□□□ -2.11
SOX6-217ENST00000533870 DNHD1Q96M86 4753 aa1.86□□□□□ -2.11
SOX6-217ENST00000533870 MUC3AQ02505 3323 aa1.86□□□□□ -2.11
SOX6-217ENST00000533870 MEGF8Q7Z7M0 2845 aa1.85□□□□□ -2.11
SOX6-217ENST00000533870 USP34Q70CQ2 3546 aa1.84□□□□□ -2.11
SOX6-217ENST00000533870 LAMA1P25391 3075 aa1.84□□□□□ -2.11
SOX6-217ENST00000533870 FBN2P35556 2912 aa1.84□□□□□ -2.12
SOX6-217ENST00000533870 MT1HL1P0DM35 61 aa1.84□□□□□ -2.12
SOX6-217ENST00000533870 TRIOO75962 3097 aa1.83□□□□□ -2.12
SOX6-217ENST00000533870 KRTAP9-6A0A140TA67 174 aa1.83□□□□□ -2.12
SOX6-217ENST00000533870 KRTAP9-7A8MTY7 169 aa1.83□□□□□ -2.12
SOX6-217ENST00000533870 ADGRG4Q8IZF6 3080 aa1.83□□□□□ -2.12
SOX6-217ENST00000533870 FBN1P35555 2871 aaKnown RBP1.83□□□□□ -2.12
SOX6-217ENST00000533870 ASH1LQ9NR48 2969 aaKnown RBP1.83□□□□□ -2.12
SOX6-217ENST00000533870 DNAH10Q8IVF4 4471 aa1.82□□□□□ -2.12
SOX6-217ENST00000533870 C5orf42Q9H799 3197 aa1.82□□□□□ -2.12
SOX6-217ENST00000533870 MYCBP2O75592 4640 aa1.82□□□□□ -2.12
SOX6-217ENST00000533870 BIRC6Q9NR09 4857 aa1.81□□□□□ -2.12
SOX6-217ENST00000533870 DNAH11Q96DT5 4516 aa1.81□□□□□ -2.12
SOX6-217ENST00000533870 KIAA1109Q2LD37 5005 aa1.81□□□□□ -2.12
SOX6-217ENST00000533870 WDFY4Q6ZS81 3184 aa1.8□□□□□ -2.12
SOX6-217ENST00000533870 OTOGQ6ZRI0 2925 aa1.8□□□□□ -2.12
SOX6-217ENST00000533870 DNAH12Q6ZR08 3092 aa1.8□□□□□ -2.12
SOX6-217ENST00000533870 PLECQ15149 4684 aaKnown RBP1.8□□□□□ -2.12
SOX6-217ENST00000533870 SPRR5A0A1B0GTR4 108 aa1.79□□□□□ -2.12
SOX6-217ENST00000533870 KRTAP8-1Q8IUC2 63 aa1.78□□□□□ -2.12
SOX6-217ENST00000533870 SPENQ96T58 3664 aaKnown RBP1.78□□□□□ -2.12
SOX6-217ENST00000533870 RYR3Q15413 4870 aa1.78□□□□□ -2.12
SOX6-217ENST00000533870 FRYLO94915 3013 aa1.78□□□□□ -2.12
SOX6-217ENST00000533870 DMXL2Q8TDJ6 3036 aa1.78□□□□□ -2.12
SOX6-217ENST00000533870 EYSQ5T1H1 3165 aa1.78□□□□□ -2.12
SOX6-217ENST00000533870 PKD1L1Q8TDX9 2849 aa1.77□□□□□ -2.13
SOX6-217ENST00000533870 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.77□□□□□ -2.13
SOX6-217ENST00000533870 KRTAP19-1Q8IUB9 90 aa1.77□□□□□ -2.13
SOX6-217ENST00000533870 DNAH2Q9P225 4427 aa1.76□□□□□ -2.13
SOX6-217ENST00000533870 SRRM2Q9UQ35 2752 aaKnown RBP1.76□□□□□ -2.13
SOX6-217ENST00000533870 DYNC1H1Q14204 4646 aaKnown RBP1.76□□□□□ -2.13
SOX6-217ENST00000533870 LRP1BQ9NZR2 4599 aa1.75□□□□□ -2.13
SOX6-217ENST00000533870 HYDINQ4G0P3 5121 aa1.75□□□□□ -2.13
SOX6-217ENST00000533870 BOD1L1Q8NFC6 3051 aa1.74□□□□□ -2.13
SOX6-217ENST00000533870 GOLGB1Q14789 3259 aaKnown RBP1.74□□□□□ -2.13
SOX6-217ENST00000533870 ZFHX4Q86UP3 3567 aa1.73□□□□□ -2.13
SOX6-217ENST00000533870 KRTAP10-10P60014 251 aa1.73□□□□□ -2.13
SOX6-217ENST00000533870 CRYBG3Q68DQ2 2970 aa1.73□□□□□ -2.13
SOX6-217ENST00000533870 PRUNE2Q8WUY3 3088 aa1.73□□□□□ -2.13
SOX6-217ENST00000533870 TNRC18O15417 2968 aaPredicted RBP1.73□□□□□ -2.13
SOX6-217ENST00000533870 DNAH5Q8TE73 4624 aa1.72□□□□□ -2.13
SOX6-217ENST00000533870 SPTBN5Q9NRC6 3674 aaKnown RBP1.72□□□□□ -2.13
SOX6-217ENST00000533870 REV3LO60673 3130 aa1.72□□□□□ -2.13
SOX6-217ENST00000533870 HSPG2P98160 4391 aa1.72□□□□□ -2.13
SOX6-217ENST00000533870 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
SOX6-217ENST00000533870 KRTAP9-4Q9BYQ2 154 aa1.71□□□□□ -2.14
SOX6-217ENST00000533870 FREM2Q5SZK8 3169 aa1.71□□□□□ -2.14
SOX6-217ENST00000533870 LAMA3Q16787 3333 aa1.71□□□□□ -2.14
SOX6-217ENST00000533870 SPRR2GQ9BYE4 73 aa1.7□□□□□ -2.14
SOX6-217ENST00000533870 KRTAP9-2Q9BYQ4 174 aa1.7□□□□□ -2.14
SOX6-217ENST00000533870 MKI67P46013 3256 aaKnown RBP1.7□□□□□ -2.14
SOX6-217ENST00000533870 KRTAP9-9Q9BYP9 154 aa1.7□□□□□ -2.14
SOX6-217ENST00000533870 LCE3BQ5TA77 95 aa1.69□□□□□ -2.14
SOX6-217ENST00000533870 KRTAP10-12P60413 245 aa1.69□□□□□ -2.14
SOX6-217ENST00000533870 ABCA13Q86UQ4 5058 aa1.69□□□□□ -2.14
SOX6-217ENST00000533870 EPPK1P58107 5090 aaKnown RBP1.69□□□□□ -2.14
SOX6-217ENST00000533870 PCNTO95613 3336 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms