RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 CDC42SE1Q9NRR8 79 aa2.26□□□□□ -2.05
ATM-221ENST00000533690 NOTCH3Q9UM47 2321 aa2.26□□□□□ -2.05
ATM-221ENST00000533690 A0A0G2JQZ4 141 aa2.26□□□□□ -2.05
ATM-221ENST00000533690 PSPHP1O15172 72 aa2.26□□□□□ -2.05
ATM-221ENST00000533690 KTN1-AS1Q86SY8 53 aa2.26□□□□□ -2.05
ATM-221ENST00000533690 SPTA1P02549 2419 aa2.25□□□□□ -2.05
ATM-221ENST00000533690 NBDYA0A0U1RRE5 68 aa2.25□□□□□ -2.05
ATM-221ENST00000533690 HRES1P13985 223 aa2.25□□□□□ -2.05
ATM-221ENST00000533690 KRTAP3-1Q9BYR8 98 aa2.25□□□□□ -2.05
ATM-221ENST00000533690 NBASA2RRP1 2371 aa2.25□□□□□ -2.05
ATM-221ENST00000533690 H0Y9P7 68 aa2.24□□□□□ -2.05
ATM-221ENST00000533690 PRLHP81277 87 aa2.24□□□□□ -2.05
ATM-221ENST00000533690 CASC2Q6XLA1 102 aa2.24□□□□□ -2.05
ATM-221ENST00000533690 ITPR2Q14571 2701 aa2.24□□□□□ -2.05
ATM-221ENST00000533690 A8MUN3 132 aa2.24□□□□□ -2.05
ATM-221ENST00000533690 RTL8CO15255 209 aa2.24□□□□□ -2.05
ATM-221ENST00000533690 Q5W150 140 aa2.24□□□□□ -2.05
ATM-221ENST00000533690 BRK1Q8WUW1 75 aa2.24□□□□□ -2.05
ATM-221ENST00000533690 A0A087WSZ3 146 aa2.24□□□□□ -2.05
ATM-221ENST00000533690 KRTAP13-2Q52LG2 175 aa2.24□□□□□ -2.05
ATM-221ENST00000533690 GCN1Q92616 2671 aaKnown RBP2.23□□□□□ -2.05
ATM-221ENST00000533690 MEGF8Q7Z7M0 2845 aa2.23□□□□□ -2.05
ATM-221ENST00000533690 A0A087WTM6 91 aa2.23□□□□□ -2.05
ATM-221ENST00000533690 COA5Q86WW8 74 aa2.23□□□□□ -2.05
ATM-221ENST00000533690 LINC00208Q96KT6 92 aa2.23□□□□□ -2.05
ATM-221ENST00000533690 CREBBPQ92793 2442 aa2.23□□□□□ -2.05
ATM-221ENST00000533690 FLGP20930 4061 aaPredicted RBP2.23□□□□□ -2.05
ATM-221ENST00000533690 KRTAP9-7A8MTY7 169 aa2.23□□□□□ -2.05
ATM-221ENST00000533690 ZNF861PO60384 105 aa2.22□□□□□ -2.05
ATM-221ENST00000533690 UBE2AP49459 152 aa2.22□□□□□ -2.05
ATM-221ENST00000533690 CSPG4Q6UVK1 2322 aa2.22□□□□□ -2.05
ATM-221ENST00000533690 NAV2Q8IVL1 2488 aa2.22□□□□□ -2.05
ATM-221ENST00000533690 RP1L1Q8IWN7 2480 aaPredicted RBP2.22□□□□□ -2.05
ATM-221ENST00000533690 HECTD1Q9ULT8 2610 aa2.22□□□□□ -2.05
ATM-221ENST00000533690 C8orf87E5RJ46 101 aa2.22□□□□□ -2.05
ATM-221ENST00000533690 MRPL34Q9BQ48 92 aaKnown RBP2.22□□□□□ -2.05
ATM-221ENST00000533690 IGKV2-30P06310 120 aa2.21□□□□□ -2.06
ATM-221ENST00000533690 HTN3P15516 51 aa2.21□□□□□ -2.06
ATM-221ENST00000533690 NDUFS5O43920 106 aa2.21□□□□□ -2.06
ATM-221ENST00000533690 SPATA8Q6RVD6 105 aa2.21□□□□□ -2.06
ATM-221ENST00000533690 PSORS1C2Q9UIG4 136 aa2.21□□□□□ -2.06
ATM-221ENST00000533690 NBEAL2Q6ZNJ1 2754 aa2.21□□□□□ -2.06
ATM-221ENST00000533690 FN1P02751 2386 aaKnown RBP2.21□□□□□ -2.06
ATM-221ENST00000533690 DEFB105AQ8NG35 78 aa2.21□□□□□ -2.06
ATM-221ENST00000533690 ZNF706Q9Y5V0 76 aaPredicted RBP2.21□□□□□ -2.06
ATM-221ENST00000533690 TPRP12270 2363 aaKnown RBP2.2□□□□□ -2.06
ATM-221ENST00000533690 RBM12B-AS1Q9P1G2 102 aa2.2□□□□□ -2.06
ATM-221ENST00000533690 NUPR2A6NF83 97 aa2.2□□□□□ -2.06
ATM-221ENST00000533690 SRRM2Q9UQ35 2752 aaKnown RBP2.2□□□□□ -2.06
ATM-221ENST00000533690 IGLV7-43P04211 117 aa2.19□□□□□ -2.06
ATM-221ENST00000533690 SSBP3-AS1Q7Z2R9 100 aa2.19□□□□□ -2.06
ATM-221ENST00000533690 KRTAP4-8A0A0G2JLE6 195 aa2.19□□□□□ -2.06
ATM-221ENST00000533690 SPINK7P58062 85 aa2.18□□□□□ -2.06
ATM-221ENST00000533690 C7orf65Q6ZTY9 151 aa2.18□□□□□ -2.06
ATM-221ENST00000533690 KRTAP17-1Q9BYP8 105 aa2.18□□□□□ -2.06
ATM-221ENST00000533690 KRTAP9-8Q9BYQ0 159 aa2.18□□□□□ -2.06
ATM-221ENST00000533690 MP68P56378 58 aa2.18□□□□□ -2.06
ATM-221ENST00000533690 Q8N1X5 172 aa2.18□□□□□ -2.06
ATM-221ENST00000533690 A0A1B0GVY2 172 aa2.18□□□□□ -2.06
ATM-221ENST00000533690 TLN2Q9Y4G6 2542 aa2.17□□□□□ -2.06
ATM-221ENST00000533690 LRRK2Q5S007 2527 aa2.17□□□□□ -2.06
ATM-221ENST00000533690 IGKV2D-30A0A075B6S6 120 aa2.17□□□□□ -2.06
ATM-221ENST00000533690 KRTAP19-4Q3LI73 84 aa2.17□□□□□ -2.06
ATM-221ENST00000533690 IGHV6-1A0A0B4J1U7 121 aa2.17□□□□□ -2.06
ATM-221ENST00000533690 KRTAP10-2P60368 255 aa2.17□□□□□ -2.06
ATM-221ENST00000533690 C20orf166-AS1Q96NR2 134 aa2.17□□□□□ -2.06
ATM-221ENST00000533690 JMJD1CQ15652 2540 aa2.17□□□□□ -2.06
ATM-221ENST00000533690 POLQO75417 2590 aa2.17□□□□□ -2.06
ATM-221ENST00000533690 A8MUU9 505 aa2.16□□□□□ -2.06
ATM-221ENST00000533690 DEFB116Q30KQ4 102 aa2.16□□□□□ -2.06
ATM-221ENST00000533690 WFDC13Q8IUB5 93 aa2.16□□□□□ -2.06
ATM-221ENST00000533690 FLNBO75369 2602 aaKnown RBP2.15□□□□□ -2.06
ATM-221ENST00000533690 ABCA12Q86UK0 2595 aa2.15□□□□□ -2.07
ATM-221ENST00000533690 RIF1Q5UIP0 2472 aaKnown RBP2.15□□□□□ -2.07
ATM-221ENST00000533690 LCE1DQ5T752 114 aa2.15□□□□□ -2.07
ATM-221ENST00000533690 C2CD3Q4AC94 2353 aa2.14□□□□□ -2.07
ATM-221ENST00000533690 PRR15LQ9BU68 103 aa2.14□□□□□ -2.07
ATM-221ENST00000533690 ANAPC11Q9NYG5 84 aa2.13□□□□□ -2.07
ATM-221ENST00000533690 CHKB-CPT1BH3BT56 60 aa2.13□□□□□ -2.07
ATM-221ENST00000533690 RYR1P21817 5038 aa2.12□□□□□ -2.07
ATM-221ENST00000533690 MYO9AB2RTY4 2548 aa2.12□□□□□ -2.07
ATM-221ENST00000533690 CIRBP-AS1Q8TBR5 109 aa2.12□□□□□ -2.07
ATM-221ENST00000533690 LINC00313P59037 77 aa2.11□□□□□ -2.07
ATM-221ENST00000533690 KRTAP10-1P60331 282 aa2.11□□□□□ -2.07
ATM-221ENST00000533690 KRTAP9-3Q9BYQ3 159 aa2.11□□□□□ -2.07
ATM-221ENST00000533690 RYR3Q15413 4870 aa2.11□□□□□ -2.07
ATM-221ENST00000533690 HELZ2Q9BYK8 2649 aaKnown RBP2.11□□□□□ -2.07
ATM-221ENST00000533690 ZFYVE26Q68DK2 2539 aa2.1□□□□□ -2.07
ATM-221ENST00000533690 ACYP2P14621 99 aa2.1□□□□□ -2.07
ATM-221ENST00000533690 KRTAP4-7Q9BYR0 210 aa2.1□□□□□ -2.07
ATM-221ENST00000533690 NBEAL1Q6ZS30 2694 aa2.09□□□□□ -2.07
ATM-221ENST00000533690 SPG11Q96JI7 2443 aa2.09□□□□□ -2.07
ATM-221ENST00000533690 PRB2P02812 416 aaPredicted RBP2.09□□□□□ -2.08
ATM-221ENST00000533690 HIVEP2P31629 2446 aa2.09□□□□□ -2.08
ATM-221ENST00000533690 H0YAA0 97 aa2.09□□□□□ -2.08
ATM-221ENST00000533690 SPAG11AQ6PDA7 123 aa2.09□□□□□ -2.08
ATM-221ENST00000533690 SETD2Q9BYW2 2564 aaPredicted RBP2.08□□□□□ -2.08
ATM-221ENST00000533690 SONP18583 2426 aaKnown RBP2.08□□□□□ -2.08
ATM-221ENST00000533690 SPINK1P00995 79 aa2.07□□□□□ -2.08
ATM-221ENST00000533690 SPINK6Q6UWN8 80 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms