RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 LINC00208Q96KT6 92 aa8.79□□□□□ -1
SRPRA-206ENST00000532259 OXTP01178 125 aa8.78□□□□□ -1
SRPRA-206ENST00000532259 CD164Q04900 197 aa8.78□□□□□ -1
SRPRA-206ENST00000532259 TYMSOSQ8TAI1 123 aa8.78□□□□□ -1
SRPRA-206ENST00000532259 NDUFC1O43677 76 aa8.77□□□□□ -1.01
SRPRA-206ENST00000532259 PRR26Q8N8Z3 221 aa8.77□□□□□ -1.01
SRPRA-206ENST00000532259 H0Y9P7 68 aa8.77□□□□□ -1.01
SRPRA-206ENST00000532259 MP68P56378 58 aa8.76□□□□□ -1.01
SRPRA-206ENST00000532259 PRR4Q16378 134 aa8.75□□□□□ -1.01
SRPRA-206ENST00000532259 KRTAP10-4P60372 401 aaPredicted RBP8.74□□□□□ -1.01
SRPRA-206ENST00000532259 ZCCHC13Q8WW36 166 aaKnown RBP8.74□□□□□ -1.01
SRPRA-206ENST00000532259 C1orf195Q5TG92 126 aa8.73□□□□□ -1.01
SRPRA-206ENST00000532259 C4orf48Q5BLP8 95 aa8.72□□□□□ -1.01
SRPRA-206ENST00000532259 ASB16-AS1Q495Z4 193 aa8.72□□□□□ -1.01
SRPRA-206ENST00000532259 MRPL34Q9BQ48 92 aaKnown RBP8.71□□□□□ -1.01
SRPRA-206ENST00000532259 TRAV22A0A0B4J277 110 aa8.7□□□□□ -1.02
SRPRA-206ENST00000532259 C1orf64Q8NEQ6 169 aa8.69□□□□□ -1.02
SRPRA-206ENST00000532259 RPS28P62857 69 aaKnown RBP8.68□□□□□ -1.02
SRPRA-206ENST00000532259 HSPG2P98160 4391 aa8.67□□□□□ -1.02
SRPRA-206ENST00000532259 LIMD2Q9BT23 127 aa8.65□□□□□ -1.02
SRPRA-206ENST00000532259 RETNLBQ9BQ08 111 aa8.64□□□□□ -1.03
SRPRA-206ENST00000532259 SERP1Q9Y6X1 66 aa8.64□□□□□ -1.03
SRPRA-206ENST00000532259 LINC00313P59037 77 aa8.64□□□□□ -1.03
SRPRA-206ENST00000532259 LINC00304Q8N9R0 145 aa8.64□□□□□ -1.03
SRPRA-206ENST00000532259 PCOTHQ58A44 107 aa8.63□□□□□ -1.03
SRPRA-206ENST00000532259 LRP1Q07954 4544 aaKnown RBP8.63□□□□□ -1.03
SRPRA-206ENST00000532259 TP53AIP1Q9HCN2 124 aa8.63□□□□□ -1.03
SRPRA-206ENST00000532259 PKHD1L1Q86WI1 4243 aa8.62□□□□□ -1.03
SRPRA-206ENST00000532259 Q5XG85 94 aa8.62□□□□□ -1.03
SRPRA-206ENST00000532259 SPINK1P00995 79 aa8.61□□□□□ -1.03
SRPRA-206ENST00000532259 Q5W150 140 aa8.61□□□□□ -1.03
SRPRA-206ENST00000532259 KIAA1109Q2LD37 5005 aa8.6□□□□□ -1.03
SRPRA-206ENST00000532259 ATP5EP56381 51 aaPredicted RBP8.6□□□□□ -1.03
SRPRA-206ENST00000532259 KRTAP17-1Q9BYP8 105 aa8.59□□□□□ -1.03
SRPRA-206ENST00000532259 EPPK1P58107 5090 aaKnown RBP8.58□□□□□ -1.04
SRPRA-206ENST00000532259 C8orf87E5RJ46 101 aa8.58□□□□□ -1.04
SRPRA-206ENST00000532259 RYR1P21817 5038 aa8.57□□□□□ -1.04
SRPRA-206ENST00000532259 FLG2Q5D862 2391 aaPredicted RBP8.57□□□□□ -1.04
SRPRA-206ENST00000532259 H3BPC8 53 aa8.57□□□□□ -1.04
SRPRA-206ENST00000532259 FAM229AH3BQW9 127 aa8.53□□□□□ -1.04
SRPRA-206ENST00000532259 Q5VSD8 79 aa8.52□□□□□ -1.05
SRPRA-206ENST00000532259 KRTAP16-1A8MUX0 517 aa8.51□□□□□ -1.05
SRPRA-206ENST00000532259 C4orf26Q17RF5 130 aa8.51□□□□□ -1.05
SRPRA-206ENST00000532259 SPAG11AQ6PDA7 123 aa8.49□□□□□ -1.05
SRPRA-206ENST00000532259 FP248Q71RG6 208 aaPredicted RBP8.49□□□□□ -1.05
SRPRA-206ENST00000532259 Q8N9P0 234 aaPredicted RBP8.49□□□□□ -1.05
SRPRA-206ENST00000532259 KRTAP13-3Q3SY46 172 aa8.48□□□□□ -1.05
SRPRA-206ENST00000532259 MPLKIPQ8TAP9 179 aa8.48□□□□□ -1.05
SRPRA-206ENST00000532259 MYCBP2O75592 4640 aa8.48□□□□□ -1.05
SRPRA-206ENST00000532259 TNXBP22105 4242 aa8.48□□□□□ -1.05
SRPRA-206ENST00000532259 C9orf92A6NGG3 77 aa8.48□□□□□ -1.05
SRPRA-206ENST00000532259 DMBT1Q9UGM3 2413 aaPredicted RBP8.47□□□□□ -1.05
SRPRA-206ENST00000532259 CYP4F30PQ9H0H9 118 aa8.46□□□□□ -1.05
SRPRA-206ENST00000532259 SMIM26A0A096LP01 95 aa8.46□□□□□ -1.06
SRPRA-206ENST00000532259 SPANXA2-OT1Q8N9U9 137 aa8.44□□□□□ -1.06
SRPRA-206ENST00000532259 SVIPQ8NHG7 77 aa8.44□□□□□ -1.06
SRPRA-206ENST00000532259 RPS29P62273 56 aaKnown RBP8.43□□□□□ -1.06
SRPRA-206ENST00000532259 LOC101927531A0A1B0GV80 90 aa8.43□□□□□ -1.06
SRPRA-206ENST00000532259 Q8N1X5 172 aa8.43□□□□□ -1.06
SRPRA-206ENST00000532259 IGLV7-46A0A075B6I9 117 aa8.42□□□□□ -1.06
SRPRA-206ENST00000532259 IGKV2D-30A0A075B6S6 120 aa8.4□□□□□ -1.07
SRPRA-206ENST00000532259 IGKV2-30P06310 120 aa8.4□□□□□ -1.07
SRPRA-206ENST00000532259 FAT3Q8TDW7 4589 aa8.39□□□□□ -1.07
SRPRA-206ENST00000532259 BIRC6Q9NR09 4857 aa8.36□□□□□ -1.07
SRPRA-206ENST00000532259 KRTAP10-8P60410 259 aa8.35□□□□□ -1.07
SRPRA-206ENST00000532259 COA5Q86WW8 74 aa8.35□□□□□ -1.07
SRPRA-206ENST00000532259 HRES1P13985 223 aa8.35□□□□□ -1.07
SRPRA-206ENST00000532259 PSPHP1O15172 72 aa8.27□□□□□ -1.09
SRPRA-206ENST00000532259 KRTAP4-5Q9BYR2 181 aa8.25□□□□□ -1.09
SRPRA-206ENST00000532259 MT1HL1P0DM35 61 aa8.24□□□□□ -1.09
SRPRA-206ENST00000532259 C20orf166-AS1Q96NR2 134 aa8.22□□□□□ -1.09
SRPRA-206ENST00000532259 A8MUU9 505 aa8.21□□□□□ -1.09
SRPRA-206ENST00000532259 Q1T7F1 81 aa8.21□□□□□ -1.09
SRPRA-206ENST00000532259 HERC2O95714 4834 aa8.2□□□□□ -1.1
SRPRA-206ENST00000532259 A8MUN3 132 aa8.19□□□□□ -1.1
SRPRA-206ENST00000532259 C7orf65Q6ZTY9 151 aa8.19□□□□□ -1.1
SRPRA-206ENST00000532259 ACYP2P14621 99 aa8.18□□□□□ -1.1
SRPRA-206ENST00000532259 DMAC1Q96GE9 116 aa8.18□□□□□ -1.1
SRPRA-206ENST00000532259 ABCA13Q86UQ4 5058 aa8.17□□□□□ -1.1
SRPRA-206ENST00000532259 CHKB-CPT1BH3BT56 60 aa8.14□□□□□ -1.11
SRPRA-206ENST00000532259 PRR15LQ9BU68 103 aa8.13□□□□□ -1.11
SRPRA-206ENST00000532259 BRK1Q8WUW1 75 aa8.12□□□□□ -1.11
SRPRA-206ENST00000532259 SPINK7P58062 85 aa8.1□□□□□ -1.11
SRPRA-206ENST00000532259 Q75L30 129 aa8.09□□□□□ -1.11
SRPRA-206ENST00000532259 V9GYY9 64 aa8.09□□□□□ -1.11
SRPRA-206ENST00000532259 Q5VV11 94 aa8.08□□□□□ -1.12
SRPRA-206ENST00000532259 LPAP08519 4548 aa8.06□□□□□ -1.12
SRPRA-206ENST00000532259 XP32Q5T750 250 aa8.05□□□□□ -1.12
SRPRA-206ENST00000532259 ATP11AUNQ6ZP68 121 aa8.05□□□□□ -1.12
SRPRA-206ENST00000532259 LRP2P98164 4655 aa8.03□□□□□ -1.12
SRPRA-206ENST00000532259 LINC01558Q9Y6Z2 57 aa8.01□□□□□ -1.13
SRPRA-206ENST00000532259 A8MU10 97 aa8□□□□□ -1.13
SRPRA-206ENST00000532259 RPL37P61927 97 aaKnown RBP7.99□□□□□ -1.13
SRPRA-206ENST00000532259 KRTAP3-1Q9BYR8 98 aa7.98□□□□□ -1.13
SRPRA-206ENST00000532259 A6NED7 52 aa7.94□□□□□ -1.14
SRPRA-206ENST00000532259 PRO0628Q9UI54 55 aa7.93□□□□□ -1.14
SRPRA-206ENST00000532259 A0A1B0GU69 56 aa7.89□□□□□ -1.15
SRPRA-206ENST00000532259 J3QL48 77 aa7.87□□□□□ -1.15
SRPRA-206ENST00000532259 COX6B2Q6YFQ2 88 aa7.87□□□□□ -1.15
SRPRA-206ENST00000532259 TPRXLQ17RH7 258 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms