RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 MOBPQ13875 183 aa7.07□□□□□ -1.28
USP35-207ENST00000530546 HECTD4Q9Y4D8 3996 aa7.06□□□□□ -1.28
USP35-207ENST00000530546 A0A087WSZ3 146 aa7.06□□□□□ -1.28
USP35-207ENST00000530546 IGLV5-52A0A0A0MRZ9 124 aa7.06□□□□□ -1.28
USP35-207ENST00000530546 A8MWP4 228 aa7.03□□□□□ -1.28
USP35-207ENST00000530546 RPL37AP61513 92 aaKnown RBP7.03□□□□□ -1.28
USP35-207ENST00000530546 KRTAP13-1Q8IUC0 172 aa7.03□□□□□ -1.28
USP35-207ENST00000530546 DNAH17Q9UFH2 4485 aa7.03□□□□□ -1.28
USP35-207ENST00000530546 IGLV9-49A0A0B4J1Y8 123 aa7.02□□□□□ -1.28
USP35-207ENST00000530546 SPRR1BP22528 89 aa7.02□□□□□ -1.28
USP35-207ENST00000530546 PSORS1C2Q9UIG4 136 aa7.02□□□□□ -1.28
USP35-207ENST00000530546 SPAG11AQ6PDA7 123 aa6.99□□□□□ -1.29
USP35-207ENST00000530546 ANAPC11Q9NYG5 84 aa6.99□□□□□ -1.29
USP35-207ENST00000530546 WWC2-AS2Q96NR7 200 aa6.97□□□□□ -1.29
USP35-207ENST00000530546 LINC00472Q9H8W2 130 aa6.97□□□□□ -1.29
USP35-207ENST00000530546 TP53AIP1Q9HCN2 124 aa6.97□□□□□ -1.29
USP35-207ENST00000530546 KRTAP10-2P60368 255 aa6.96□□□□□ -1.29
USP35-207ENST00000530546 SPINK7P58062 85 aa6.96□□□□□ -1.3
USP35-207ENST00000530546 DNAH8Q96JB1 4490 aa6.95□□□□□ -1.3
USP35-207ENST00000530546 MMP24-AS1A0A0U1RRL7 71 aa6.95□□□□□ -1.3
USP35-207ENST00000530546 FRAS1Q86XX4 4008 aa6.94□□□□□ -1.3
USP35-207ENST00000530546 ZNF861PO60384 105 aa6.93□□□□□ -1.3
USP35-207ENST00000530546 PCOTHQ58A44 107 aa6.93□□□□□ -1.3
USP35-207ENST00000530546 LINC00313P59037 77 aa6.92□□□□□ -1.3
USP35-207ENST00000530546 ZNF706Q9Y5V0 76 aaPredicted RBP6.92□□□□□ -1.3
USP35-207ENST00000530546 DNAH6Q9C0G6 4158 aa6.91□□□□□ -1.3
USP35-207ENST00000530546 HRES1P13985 223 aa6.91□□□□□ -1.3
USP35-207ENST00000530546 ASB16-AS1Q495Z4 193 aa6.91□□□□□ -1.3
USP35-207ENST00000530546 CIRBP-AS1Q8TBR5 109 aa6.91□□□□□ -1.3
USP35-207ENST00000530546 DNAH11Q96DT5 4516 aa6.9□□□□□ -1.3
USP35-207ENST00000530546 HYDINQ4G0P3 5121 aa6.9□□□□□ -1.3
USP35-207ENST00000530546 LINC00483Q53H64 154 aa6.9□□□□□ -1.3
USP35-207ENST00000530546 DNAH5Q8TE73 4624 aa6.9□□□□□ -1.31
USP35-207ENST00000530546 IGLV7-43P04211 117 aa6.89□□□□□ -1.31
USP35-207ENST00000530546 LINC01554Q52M75 96 aa6.89□□□□□ -1.31
USP35-207ENST00000530546 A0A087X002 238 aa6.88□□□□□ -1.31
USP35-207ENST00000530546 PLA2G1BP04054 148 aaKnown RBP6.88□□□□□ -1.31
USP35-207ENST00000530546 KRTAP10-1P60331 282 aa6.87□□□□□ -1.31
USP35-207ENST00000530546 ALMS1Q8TCU4 4167 aa6.86□□□□□ -1.31
USP35-207ENST00000530546 PRAC1Q96KF2 57 aa6.83□□□□□ -1.32
USP35-207ENST00000530546 Q96NJ1 140 aa6.82□□□□□ -1.32
USP35-207ENST00000530546 C8orf17Q9NRJ1 99 aa6.81□□□□□ -1.32
USP35-207ENST00000530546 FAT2Q9NYQ8 4349 aa6.8□□□□□ -1.32
USP35-207ENST00000530546 PKD1P98161 4303 aa6.79□□□□□ -1.32
USP35-207ENST00000530546 SPINK6Q6UWN8 80 aa6.79□□□□□ -1.32
USP35-207ENST00000530546 LRP1BQ9NZR2 4599 aa6.79□□□□□ -1.32
USP35-207ENST00000530546 IGHV6-1A0A0B4J1U7 121 aa6.79□□□□□ -1.32
USP35-207ENST00000530546 Q6ZSA8 131 aa6.78□□□□□ -1.32
USP35-207ENST00000530546 CDK2AP2O75956 126 aa6.78□□□□□ -1.32
USP35-207ENST00000530546 ACYP2P14621 99 aa6.76□□□□□ -1.33
USP35-207ENST00000530546 ADM2Q7Z4H4 148 aa6.76□□□□□ -1.33
USP35-207ENST00000530546 MRPL34Q9BQ48 92 aaKnown RBP6.76□□□□□ -1.33
USP35-207ENST00000530546 A0A1B0GVX0 72 aa6.75□□□□□ -1.33
USP35-207ENST00000530546 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
USP35-207ENST00000530546 NOTCH2NLQ7Z3S9 236 aa6.72□□□□□ -1.33
USP35-207ENST00000530546 SACSQ9NZJ4 4579 aa6.72□□□□□ -1.33
USP35-207ENST00000530546 SSBP3-AS1Q7Z2R9 100 aa6.72□□□□□ -1.33
USP35-207ENST00000530546 KRTAP13-2Q52LG2 175 aa6.71□□□□□ -1.34
USP35-207ENST00000530546 A0A1B0GU69 56 aa6.71□□□□□ -1.34
USP35-207ENST00000530546 VPS13BQ7Z7G8 4022 aa6.68□□□□□ -1.34
USP35-207ENST00000530546 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
USP35-207ENST00000530546 PKHD1P08F94 4074 aa6.67□□□□□ -1.34
USP35-207ENST00000530546 MIR22HGQ0VDD5 57 aa6.67□□□□□ -1.34
USP35-207ENST00000530546 KRTAP13-3Q3SY46 172 aa6.67□□□□□ -1.34
USP35-207ENST00000530546 RETNLBQ9BQ08 111 aa6.67□□□□□ -1.34
USP35-207ENST00000530546 A0A0A0MQY5 61 aa6.66□□□□□ -1.34
USP35-207ENST00000530546 UQCR11O14957 56 aa6.66□□□□□ -1.34
USP35-207ENST00000530546 SMR3BP02814 79 aaPredicted RBP6.66□□□□□ -1.34
USP35-207ENST00000530546 KRTAP1-4P0C5Y4 121 aa6.66□□□□□ -1.34
USP35-207ENST00000530546 DYNC1H1Q14204 4646 aaKnown RBP6.63□□□□□ -1.35
USP35-207ENST00000530546 Q5W150 140 aa6.62□□□□□ -1.35
USP35-207ENST00000530546 CSAG1Q6PB30 78 aa6.61□□□□□ -1.35
USP35-207ENST00000530546 TYMSOSQ8TAI1 123 aa6.6□□□□□ -1.35
USP35-207ENST00000530546 A0A1B0GVY2 172 aa6.55□□□□□ -1.36
USP35-207ENST00000530546 RYR2Q92736 4967 aa6.55□□□□□ -1.36
USP35-207ENST00000530546 FAT1Q14517 4588 aa6.55□□□□□ -1.36
USP35-207ENST00000530546 KMT2CQ8NEZ4 4911 aaKnown RBP6.52□□□□□ -1.36
USP35-207ENST00000530546 FAM229AH3BQW9 127 aa6.52□□□□□ -1.37
USP35-207ENST00000530546 APOBP04114 4563 aaKnown RBP6.5□□□□□ -1.37
USP35-207ENST00000530546 SPINK1P00995 79 aa6.5□□□□□ -1.37
USP35-207ENST00000530546 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
USP35-207ENST00000530546 IGKV2-30P06310 120 aa6.5□□□□□ -1.37
USP35-207ENST00000530546 KRTAP16-1A8MUX0 517 aa6.45□□□□□ -1.38
USP35-207ENST00000530546 KRTAP10-4P60372 401 aaPredicted RBP6.44□□□□□ -1.38
USP35-207ENST00000530546 ROMO1P60602 79 aa6.42□□□□□ -1.38
USP35-207ENST00000530546 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
USP35-207ENST00000530546 IGKV2D-30A0A075B6S6 120 aa6.4□□□□□ -1.39
USP35-207ENST00000530546 A8MUU9 505 aa6.39□□□□□ -1.39
USP35-207ENST00000530546 C9orf92A6NGG3 77 aa6.38□□□□□ -1.39
USP35-207ENST00000530546 RPS29P62273 56 aaKnown RBP6.36□□□□□ -1.39
USP35-207ENST00000530546 RYR3Q15413 4870 aa6.34□□□□□ -1.39
USP35-207ENST00000530546 PKHD1L1Q86WI1 4243 aa6.32□□□□□ -1.4
USP35-207ENST00000530546 Q5VSD8 79 aa6.31□□□□□ -1.4
USP35-207ENST00000530546 H0YAA0 97 aa6.3□□□□□ -1.4
USP35-207ENST00000530546 LRP1Q07954 4544 aaKnown RBP6.29□□□□□ -1.4
USP35-207ENST00000530546 Q8N1X5 172 aa6.28□□□□□ -1.4
USP35-207ENST00000530546 HSPG2P98160 4391 aa6.27□□□□□ -1.41
USP35-207ENST00000530546 FLG2Q5D862 2391 aaPredicted RBP6.26□□□□□ -1.41
USP35-207ENST00000530546 RYR1P21817 5038 aa6.24□□□□□ -1.41
USP35-207ENST00000530546 P0C880 135 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms