RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 DEFB130BP0DP73 79 aa1.3□□□□□ -2.2
AMBRA1-208ENST00000529558 DEFB130AP0DP74 79 aa1.3□□□□□ -2.2
AMBRA1-208ENST00000529558 POLR2KP53803 58 aaKnown RBP1.3□□□□□ -2.2
AMBRA1-208ENST00000529558 Q0VG73 95 aa1.3□□□□□ -2.2
AMBRA1-208ENST00000529558 PMCHL1Q16048 86 aa1.3□□□□□ -2.2
AMBRA1-208ENST00000529558 LINC00575Q6W349 94 aa1.3□□□□□ -2.2
AMBRA1-208ENST00000529558 TMEM263Q8WUH6 116 aaKnown RBP1.3□□□□□ -2.2
AMBRA1-208ENST00000529558 LINC00208Q96KT6 92 aa1.3□□□□□ -2.2
AMBRA1-208ENST00000529558 ABCA13Q86UQ4 5058 aa1.3□□□□□ -2.2
AMBRA1-208ENST00000529558 FAT3Q8TDW7 4589 aa1.3□□□□□ -2.2
AMBRA1-208ENST00000529558 MYCBP2O75592 4640 aa1.3□□□□□ -2.2
AMBRA1-208ENST00000529558 A0A096LPF7 62 aa1.29□□□□□ -2.2
AMBRA1-208ENST00000529558 S100A8P05109 93 aa1.29□□□□□ -2.2
AMBRA1-208ENST00000529558 IFI27P40305 119 aaPredicted RBP1.29□□□□□ -2.2
AMBRA1-208ENST00000529558 UBE2D3P61077 147 aa1.29□□□□□ -2.2
AMBRA1-208ENST00000529558 UBE2D2P62837 147 aa1.29□□□□□ -2.2
AMBRA1-208ENST00000529558 DEFB121Q5J5C9 76 aa1.29□□□□□ -2.2
AMBRA1-208ENST00000529558 PYY3Q5JQD4 70 aa1.29□□□□□ -2.2
AMBRA1-208ENST00000529558 FAM74A4Q5TZK3 123 aa1.29□□□□□ -2.2
AMBRA1-208ENST00000529558 C5orf38Q86SI9 138 aa1.29□□□□□ -2.2
AMBRA1-208ENST00000529558 SMIM2Q9BVW6 85 aa1.29□□□□□ -2.2
AMBRA1-208ENST00000529558 DPH3P1Q9H4G8 78 aa1.29□□□□□ -2.2
AMBRA1-208ENST00000529558 TNXBP22105 4242 aa1.29□□□□□ -2.2
AMBRA1-208ENST00000529558 PKD1P98161 4303 aa1.28□□□□□ -2.2
AMBRA1-208ENST00000529558 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.28□□□□□ -2.2
AMBRA1-208ENST00000529558 TRAV13-2A0A0B4J235 113 aa1.28□□□□□ -2.2
AMBRA1-208ENST00000529558 IGIPA6NJ69 53 aa1.28□□□□□ -2.2
AMBRA1-208ENST00000529558 HCG22E2RYF7 251 aa1.28□□□□□ -2.2
AMBRA1-208ENST00000529558 SPINK8P0C7L1 97 aa1.28□□□□□ -2.2
AMBRA1-208ENST00000529558 RPL39P62891 51 aaKnown RBP1.28□□□□□ -2.2
AMBRA1-208ENST00000529558 C20orf197Q8N268 126 aa1.28□□□□□ -2.2
AMBRA1-208ENST00000529558 PMCHL2Q9BQD1 86 aa1.28□□□□□ -2.2
AMBRA1-208ENST00000529558 C20orf78Q9BR46 151 aa1.28□□□□□ -2.2
AMBRA1-208ENST00000529558 KIAA1109Q2LD37 5005 aa1.28□□□□□ -2.2
AMBRA1-208ENST00000529558 TGP01266 2768 aa1.28□□□□□ -2.2
AMBRA1-208ENST00000529558 HERC1Q15751 4861 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 DEFB131BA0A096LNP1 70 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 TRBV30A0A0K0K1B3 111 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 C3orf79P0CE67 100 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 SPART-AS1P0CW21 52 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 HTN3P15516 51 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 FCER1GP30273 86 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 COX6A2Q02221 97 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 KLKP1Q107X0 134 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 WFDC2Q14508 124 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 ZNF56Q15929 161 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 Q6ZSA8 131 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 BAGE3Q86Y29 109 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 WFDC10BQ8IUB3 73 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 AMELXQ99217 191 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 ST20Q9HBF5 79 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 PRO0255Q9UI72 69 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 APLNQ9ULZ1 77 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 UBE2D4Q9Y2X8 147 aa1.27□□□□□ -2.21
AMBRA1-208ENST00000529558 TRBV7-3A0A075B6L6 115 aa1.26□□□□□ -2.21
AMBRA1-208ENST00000529558 I3L3M4 83 aa1.26□□□□□ -2.21
AMBRA1-208ENST00000529558 ANGP03950 147 aaKnown RBP1.26□□□□□ -2.21
AMBRA1-208ENST00000529558 ATP5EP56381 51 aaPredicted RBP1.26□□□□□ -2.21
AMBRA1-208ENST00000529558 LELP1Q5T871 98 aa1.26□□□□□ -2.21
AMBRA1-208ENST00000529558 ENHOQ6UWT2 76 aa1.26□□□□□ -2.21
AMBRA1-208ENST00000529558 COX7B2Q8TF08 81 aa1.26□□□□□ -2.21
AMBRA1-208ENST00000529558 NXT2Q9NPJ8 142 aaKnown RBP1.26□□□□□ -2.21
AMBRA1-208ENST00000529558 CDC42SE2Q9NRR3 84 aa1.26□□□□□ -2.21
AMBRA1-208ENST00000529558 FLG2Q5D862 2391 aaPredicted RBP1.26□□□□□ -2.21
AMBRA1-208ENST00000529558 LRP1Q07954 4544 aaKnown RBP1.25□□□□□ -2.21
AMBRA1-208ENST00000529558 COL7A1Q02388 2944 aa1.25□□□□□ -2.21
AMBRA1-208ENST00000529558 A0A087WTM6 91 aa1.25□□□□□ -2.21
AMBRA1-208ENST00000529558 SYS1-DBNDD2H3BUS1 97 aa1.25□□□□□ -2.21
AMBRA1-208ENST00000529558 KRTDAPP60985 99 aa1.25□□□□□ -2.21
AMBRA1-208ENST00000529558 CLPSL2Q6UWE3 100 aa1.25□□□□□ -2.21
AMBRA1-208ENST00000529558 LINC00959A0A1B0GUT2 108 aa1.24□□□□□ -2.21
AMBRA1-208ENST00000529558 A0A1W2PPM0 123 aa1.24□□□□□ -2.21
AMBRA1-208ENST00000529558 TMEM262E9PQX1 116 aa1.24□□□□□ -2.21
AMBRA1-208ENST00000529558 H3BNG1 76 aa1.24□□□□□ -2.21
AMBRA1-208ENST00000529558 LEPROTL1O95214 131 aa1.24□□□□□ -2.21
AMBRA1-208ENST00000529558 IGLC3P0DOY3 106 aa1.24□□□□□ -2.21
AMBRA1-208ENST00000529558 ELOF1P60002 83 aaKnown RBP1.24□□□□□ -2.21
AMBRA1-208ENST00000529558 LINC01556Q5JQF7 62 aa1.24□□□□□ -2.21
AMBRA1-208ENST00000529558 CYP4F30PQ9H0H9 118 aa1.24□□□□□ -2.21
AMBRA1-208ENST00000529558 PRO1933Q9H354 126 aa1.24□□□□□ -2.21
AMBRA1-208ENST00000529558 CDKN2A-AS1Q9UH64 79 aa1.24□□□□□ -2.21
AMBRA1-208ENST00000529558 TRBV25-1A0A075B6N4 114 aa1.23□□□□□ -2.21
AMBRA1-208ENST00000529558 F8VRH5 84 aa1.23□□□□□ -2.21
AMBRA1-208ENST00000529558 K7EMI3 77 aa1.23□□□□□ -2.21
AMBRA1-208ENST00000529558 M0R143 59 aa1.23□□□□□ -2.21
AMBRA1-208ENST00000529558 PPP1R17O96001 155 aa1.23□□□□□ -2.21
AMBRA1-208ENST00000529558 LCE1CQ5T751 118 aa1.23□□□□□ -2.21
AMBRA1-208ENST00000529558 LCE1BQ5T7P3 118 aa1.23□□□□□ -2.21
AMBRA1-208ENST00000529558 HMCN2Q8NDA2 5059 aa1.22□□□□□ -2.21
AMBRA1-208ENST00000529558 LINC00474Q9P2X8 69 aa1.22□□□□□ -2.21
AMBRA1-208ENST00000529558 C6orf48Q9UBA6 75 aa1.22□□□□□ -2.21
AMBRA1-208ENST00000529558 LCE6AA0A183 80 aa1.21□□□□□ -2.22
AMBRA1-208ENST00000529558 COX8AP10176 69 aa1.21□□□□□ -2.22
AMBRA1-208ENST00000529558 CCL18P55774 89 aa1.21□□□□□ -2.22
AMBRA1-208ENST00000529558 PKIAP61925 76 aa1.21□□□□□ -2.22
AMBRA1-208ENST00000529558 TMEM170BQ5T4T1 132 aa1.21□□□□□ -2.22
AMBRA1-208ENST00000529558 GVQW2A0A096LPI5 108 aaPredicted RBP1.2□□□□□ -2.22
AMBRA1-208ENST00000529558 MYMXA0A1B0GTQ4 84 aa1.2□□□□□ -2.22
AMBRA1-208ENST00000529558 ZNF815PA8K554 130 aa1.2□□□□□ -2.22
AMBRA1-208ENST00000529558 LY6G6CO95867 125 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms