RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 CFAP54Q96N23 3096 aa1.31□□□□□ -2.2
SOX6-212ENST00000529469 TEP1Q99973 2627 aaKnown RBP1.3□□□□□ -2.2
SOX6-212ENST00000529469 ANKRD11Q6UB99 2663 aaPredicted RBP1.3□□□□□ -2.2
SOX6-212ENST00000529469 ABCA2Q9BZC7 2435 aa1.3□□□□□ -2.2
SOX6-212ENST00000529469 FASNP49327 2511 aaKnown RBP1.29□□□□□ -2.2
SOX6-212ENST00000529469 FLNBO75369 2602 aaKnown RBP1.29□□□□□ -2.2
SOX6-212ENST00000529469 AKAP9Q99996 3911 aa1.29□□□□□ -2.2
SOX6-212ENST00000529469 C2CD3Q4AC94 2353 aa1.29□□□□□ -2.2
SOX6-212ENST00000529469 COL6A5A8TX70 2615 aa1.29□□□□□ -2.2
SOX6-212ENST00000529469 CELSR1Q9NYQ6 3014 aa1.29□□□□□ -2.2
SOX6-212ENST00000529469 GVINP1Q7Z2Y8 2422 aa1.28□□□□□ -2.2
SOX6-212ENST00000529469 CCDC168Q8NDH2 2452 aa1.28□□□□□ -2.2
SOX6-212ENST00000529469 BDP1A6H8Y1 2624 aa1.28□□□□□ -2.2
SOX6-212ENST00000529469 HTN3P15516 51 aa1.28□□□□□ -2.2
SOX6-212ENST00000529469 CACNA1HO95180 2353 aa1.28□□□□□ -2.2
SOX6-212ENST00000529469 CEP250Q9BV73 2442 aa1.28□□□□□ -2.2
SOX6-212ENST00000529469 ITPR3Q14573 2671 aa1.28□□□□□ -2.2
SOX6-212ENST00000529469 ZFHX4Q86UP3 3567 aa1.27□□□□□ -2.21
SOX6-212ENST00000529469 ZZEF1O43149 2961 aa1.27□□□□□ -2.21
SOX6-212ENST00000529469 PIEZO1Q92508 2521 aa1.27□□□□□ -2.21
SOX6-212ENST00000529469 C5orf42Q9H799 3197 aa1.27□□□□□ -2.21
SOX6-212ENST00000529469 FRYLO94915 3013 aa1.27□□□□□ -2.21
SOX6-212ENST00000529469 DOPEY1Q5JWR5 2465 aa1.27□□□□□ -2.21
SOX6-212ENST00000529469 EPG5Q9HCE0 2579 aa1.26□□□□□ -2.21
SOX6-212ENST00000529469 SPART-AS1P0CW21 52 aa1.26□□□□□ -2.21
SOX6-212ENST00000529469 DEFB124Q8NES8 71 aa1.26□□□□□ -2.21
SOX6-212ENST00000529469 CEP290O15078 2479 aa1.26□□□□□ -2.21
SOX6-212ENST00000529469 EP300Q09472 2414 aaPredicted RBP1.26□□□□□ -2.21
SOX6-212ENST00000529469 F8P00451 2351 aa1.26□□□□□ -2.21
SOX6-212ENST00000529469 APC2O95996 2303 aa1.26□□□□□ -2.21
SOX6-212ENST00000529469 HECTD1Q9ULT8 2610 aa1.25□□□□□ -2.21
SOX6-212ENST00000529469 BOD1L1Q8NFC6 3051 aa1.25□□□□□ -2.21
SOX6-212ENST00000529469 LINC01556Q5JQF7 62 aa1.25□□□□□ -2.21
SOX6-212ENST00000529469 ABCA12Q86UK0 2595 aa1.25□□□□□ -2.21
SOX6-212ENST00000529469 MYO18BQ8IUG5 2567 aa1.25□□□□□ -2.21
SOX6-212ENST00000529469 SETD2Q9BYW2 2564 aaPredicted RBP1.24□□□□□ -2.21
SOX6-212ENST00000529469 MAP1BP46821 2468 aaKnown RBP1.24□□□□□ -2.21
SOX6-212ENST00000529469 VPS13DQ5THJ4 4388 aa1.24□□□□□ -2.21
SOX6-212ENST00000529469 ZNF292O60281 2723 aa1.24□□□□□ -2.21
SOX6-212ENST00000529469 DMDP11532 3685 aa1.24□□□□□ -2.21
SOX6-212ENST00000529469 SPTBN5Q9NRC6 3674 aaKnown RBP1.24□□□□□ -2.21
SOX6-212ENST00000529469 MYO9AB2RTY4 2548 aa1.24□□□□□ -2.21
SOX6-212ENST00000529469 DNAH11Q96DT5 4516 aa1.24□□□□□ -2.21
SOX6-212ENST00000529469 MAP1AP78559 2803 aaPredicted RBP1.24□□□□□ -2.21
SOX6-212ENST00000529469 ITPR1Q14643 2758 aa1.23□□□□□ -2.21
SOX6-212ENST00000529469 MKI67P46013 3256 aaKnown RBP1.23□□□□□ -2.21
SOX6-212ENST00000529469 H3BNG1 76 aa1.23□□□□□ -2.21
SOX6-212ENST00000529469 VPS13AQ96RL7 3174 aa1.23□□□□□ -2.21
SOX6-212ENST00000529469 TTC28Q96AY4 2481 aa1.23□□□□□ -2.21
SOX6-212ENST00000529469 CHD9Q3L8U1 2897 aa1.22□□□□□ -2.21
SOX6-212ENST00000529469 TRIOO75962 3097 aa1.22□□□□□ -2.21
SOX6-212ENST00000529469 WDFY4Q6ZS81 3184 aa1.22□□□□□ -2.21
SOX6-212ENST00000529469 CFAP47Q6ZTR5 3102 aa1.22□□□□□ -2.21
SOX6-212ENST00000529469 DMXL1Q9Y485 3027 aa1.22□□□□□ -2.21
SOX6-212ENST00000529469 GOLGB1Q14789 3259 aaKnown RBP1.21□□□□□ -2.21
SOX6-212ENST00000529469 FRYQ5TBA9 3013 aa1.21□□□□□ -2.22
SOX6-212ENST00000529469 MYCBP2O75592 4640 aa1.21□□□□□ -2.22
SOX6-212ENST00000529469 DEFB4AO15263 64 aa1.21□□□□□ -2.22
SOX6-212ENST00000529469 DEFB135Q30KP9 77 aa1.21□□□□□ -2.22
SOX6-212ENST00000529469 UTRNP46939 3433 aa1.21□□□□□ -2.22
SOX6-212ENST00000529469 CREBBPQ92793 2442 aa1.21□□□□□ -2.22
SOX6-212ENST00000529469 DMBT1Q9UGM3 2413 aaPredicted RBP1.21□□□□□ -2.22
SOX6-212ENST00000529469 LRBAP50851 2863 aa1.21□□□□□ -2.22
SOX6-212ENST00000529469 HTTP42858 3142 aa1.2□□□□□ -2.22
SOX6-212ENST00000529469 SZT2Q5T011 3432 aa1.2□□□□□ -2.22
SOX6-212ENST00000529469 TNP1P09430 55 aa1.2□□□□□ -2.22
SOX6-212ENST00000529469 U3KQA8 63 aa1.2□□□□□ -2.22
SOX6-212ENST00000529469 NBASA2RRP1 2371 aa1.2□□□□□ -2.22
SOX6-212ENST00000529469 MEGF8Q7Z7M0 2845 aa1.2□□□□□ -2.22
SOX6-212ENST00000529469 DCHS2Q6V1P9 2916 aa1.19□□□□□ -2.22
SOX6-212ENST00000529469 RELNP78509 3460 aa1.19□□□□□ -2.22
SOX6-212ENST00000529469 BSNQ9UPA5 3926 aa1.19□□□□□ -2.22
SOX6-212ENST00000529469 LYSTQ99698 3801 aa1.19□□□□□ -2.22
SOX6-212ENST00000529469 GCN1Q92616 2671 aaKnown RBP1.19□□□□□ -2.22
SOX6-212ENST00000529469 CENPFP49454 3210 aa1.18□□□□□ -2.22
SOX6-212ENST00000529469 PDZD2O15018 2839 aa1.18□□□□□ -2.22
SOX6-212ENST00000529469 NF1P21359 2839 aa1.18□□□□□ -2.22
SOX6-212ENST00000529469 DNAH12Q6ZR08 3092 aa1.18□□□□□ -2.22
SOX6-212ENST00000529469 COL12A1Q99715 3063 aa1.18□□□□□ -2.22
SOX6-212ENST00000529469 SPENQ96T58 3664 aaKnown RBP1.18□□□□□ -2.22
SOX6-212ENST00000529469 KALRNO60229 2985 aa1.17□□□□□ -2.22
SOX6-212ENST00000529469 ATMQ13315 3056 aa1.17□□□□□ -2.22
SOX6-212ENST00000529469 COL7A1Q02388 2944 aa1.17□□□□□ -2.22
SOX6-212ENST00000529469 LRRK2Q5S007 2527 aa1.17□□□□□ -2.22
SOX6-212ENST00000529469 EYSQ5T1H1 3165 aa1.16□□□□□ -2.22
SOX6-212ENST00000529469 NOTCH1P46531 2555 aa1.16□□□□□ -2.22
SOX6-212ENST00000529469 SMG1Q96Q15 3661 aaKnown RBP1.16□□□□□ -2.22
SOX6-212ENST00000529469 LAMA2P24043 3122 aaKnown RBP1.16□□□□□ -2.22
SOX6-212ENST00000529469 ANKHD1Q8IWZ3 2542 aaKnown RBP1.16□□□□□ -2.22
SOX6-212ENST00000529469 NCOR2Q9Y618 2525 aa1.16□□□□□ -2.22
SOX6-212ENST00000529469 KRTAP10-4P60372 401 aaPredicted RBP1.15□□□□□ -2.23
SOX6-212ENST00000529469 FRAS1Q86XX4 4008 aa1.15□□□□□ -2.23
SOX6-212ENST00000529469 VPS13BQ7Z7G8 4022 aa1.15□□□□□ -2.23
SOX6-212ENST00000529469 SPG11Q96JI7 2443 aa1.15□□□□□ -2.23
SOX6-212ENST00000529469 VCANP13611 3396 aa1.14□□□□□ -2.23
SOX6-212ENST00000529469 SPEGQ15772 3267 aa1.14□□□□□ -2.23
SOX6-212ENST00000529469 DCHS1Q96JQ0 3298 aa1.14□□□□□ -2.23
SOX6-212ENST00000529469 USP9YO00507 2555 aaPredicted RBP1.14□□□□□ -2.23
SOX6-212ENST00000529469 STAB1Q9NY15 2570 aa1.14□□□□□ -2.23
SOX6-212ENST00000529469 C9orf92A6NGG3 77 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms