RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
SOX6-210ENST00000528252 COA5Q86WW8 74 aa5.03□□□□□ -1.6
SOX6-210ENST00000528252 IGFL1Q6UW32 110 aa5.02□□□□□ -1.61
SOX6-210ENST00000528252 SPANXA2-OT1Q8N9U9 137 aa5.02□□□□□ -1.61
SOX6-210ENST00000528252 PSORS1C2Q9UIG4 136 aa5.02□□□□□ -1.61
SOX6-210ENST00000528252 H0Y9P7 68 aa5.02□□□□□ -1.61
SOX6-210ENST00000528252 SPRR1BP22528 89 aa5.01□□□□□ -1.61
SOX6-210ENST00000528252 SPINK7P58062 85 aa5.01□□□□□ -1.61
SOX6-210ENST00000528252 SPRR4Q96PI1 79 aa5.01□□□□□ -1.61
SOX6-210ENST00000528252 DNAH6Q9C0G6 4158 aa5□□□□□ -1.61
SOX6-210ENST00000528252 IGLV8-61A0A075B6I0 122 aa5□□□□□ -1.61
SOX6-210ENST00000528252 A0A1B0GW54 56 aa5□□□□□ -1.61
SOX6-210ENST00000528252 ALMS1Q8TCU4 4167 aa5□□□□□ -1.61
SOX6-210ENST00000528252 HYDINQ4G0P3 5121 aa5□□□□□ -1.61
SOX6-210ENST00000528252 LINC00313P59037 77 aa5□□□□□ -1.61
SOX6-210ENST00000528252 SPAG11AQ6PDA7 123 aa5□□□□□ -1.61
SOX6-210ENST00000528252 RPL37AP61513 92 aaKnown RBP4.99□□□□□ -1.61
SOX6-210ENST00000528252 ADM2Q7Z4H4 148 aa4.99□□□□□ -1.61
SOX6-210ENST00000528252 DNAH11Q96DT5 4516 aa4.98□□□□□ -1.61
SOX6-210ENST00000528252 DNAH8Q96JB1 4490 aa4.98□□□□□ -1.61
SOX6-210ENST00000528252 CIRBP-AS1Q8TBR5 109 aa4.97□□□□□ -1.61
SOX6-210ENST00000528252 FRAS1Q86XX4 4008 aa4.97□□□□□ -1.61
SOX6-210ENST00000528252 A0A087WSZ3 146 aa4.97□□□□□ -1.61
SOX6-210ENST00000528252 ZNF861PO60384 105 aa4.96□□□□□ -1.61
SOX6-210ENST00000528252 DNAH5Q8TE73 4624 aa4.96□□□□□ -1.62
SOX6-210ENST00000528252 KRTAP10-1P60331 282 aa4.96□□□□□ -1.62
SOX6-210ENST00000528252 IGLV9-49A0A0B4J1Y8 123 aa4.95□□□□□ -1.62
SOX6-210ENST00000528252 KRTAP29-1A8MX34 341 aaPredicted RBP4.95□□□□□ -1.62
SOX6-210ENST00000528252 ANAPC11Q9NYG5 84 aa4.95□□□□□ -1.62
SOX6-210ENST00000528252 LINC01558Q9Y6Z2 57 aa4.95□□□□□ -1.62
SOX6-210ENST00000528252 FAT2Q9NYQ8 4349 aa4.95□□□□□ -1.62
SOX6-210ENST00000528252 IGLV7-43P04211 117 aa4.94□□□□□ -1.62
SOX6-210ENST00000528252 LINC01554Q52M75 96 aa4.94□□□□□ -1.62
SOX6-210ENST00000528252 LINC00483Q53H64 154 aa4.94□□□□□ -1.62
SOX6-210ENST00000528252 PCOTHQ58A44 107 aa4.94□□□□□ -1.62
SOX6-210ENST00000528252 CASC2Q6XLA1 102 aa4.94□□□□□ -1.62
SOX6-210ENST00000528252 ZNF706Q9Y5V0 76 aaPredicted RBP4.94□□□□□ -1.62
SOX6-210ENST00000528252 H3BPC8 53 aa4.93□□□□□ -1.62
SOX6-210ENST00000528252 Q6ZSA8 131 aa4.93□□□□□ -1.62
SOX6-210ENST00000528252 PKD1P98161 4303 aa4.93□□□□□ -1.62
SOX6-210ENST00000528252 IGLV7-46A0A075B6I9 117 aa4.92□□□□□ -1.62
SOX6-210ENST00000528252 SACSQ9NZJ4 4579 aa4.91□□□□□ -1.62
SOX6-210ENST00000528252 LCE2DQ5TA82 110 aaPredicted RBP4.91□□□□□ -1.62
SOX6-210ENST00000528252 LRP1BQ9NZR2 4599 aa4.9□□□□□ -1.62
SOX6-210ENST00000528252 LINC00472Q9H8W2 130 aa4.88□□□□□ -1.63
SOX6-210ENST00000528252 HRES1P13985 223 aa4.87□□□□□ -1.63
SOX6-210ENST00000528252 PKHD1P08F94 4074 aa4.87□□□□□ -1.63
SOX6-210ENST00000528252 A8MWP4 228 aa4.84□□□□□ -1.63
SOX6-210ENST00000528252 Q96NJ1 140 aa4.83□□□□□ -1.64
SOX6-210ENST00000528252 VPS13BQ7Z7G8 4022 aa4.83□□□□□ -1.64
SOX6-210ENST00000528252 A0A087X002 238 aa4.82□□□□□ -1.64
SOX6-210ENST00000528252 MMP24-AS1A0A0U1RRL7 71 aa4.82□□□□□ -1.64
SOX6-210ENST00000528252 A0A1B0GVY2 172 aa4.81□□□□□ -1.64
SOX6-210ENST00000528252 SSBP3-AS1Q7Z2R9 100 aa4.81□□□□□ -1.64
SOX6-210ENST00000528252 KMT2CQ8NEZ4 4911 aaKnown RBP4.81□□□□□ -1.64
SOX6-210ENST00000528252 KRTAP13-2Q52LG2 175 aa4.8□□□□□ -1.64
SOX6-210ENST00000528252 DYNC1H1Q14204 4646 aaKnown RBP4.8□□□□□ -1.64
SOX6-210ENST00000528252 SMR3BP02814 79 aaPredicted RBP4.8□□□□□ -1.64
SOX6-210ENST00000528252 CSAG1Q6PB30 78 aa4.8□□□□□ -1.64
SOX6-210ENST00000528252 RETNLBQ9BQ08 111 aa4.8□□□□□ -1.64
SOX6-210ENST00000528252 KRTAP1-4P0C5Y4 121 aa4.79□□□□□ -1.64
SOX6-210ENST00000528252 RYR2Q92736 4967 aa4.79□□□□□ -1.64
SOX6-210ENST00000528252 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.64
SOX6-210ENST00000528252 SPINK6Q6UWN8 80 aa4.78□□□□□ -1.64
SOX6-210ENST00000528252 IGHV6-1A0A0B4J1U7 121 aa4.76□□□□□ -1.65
SOX6-210ENST00000528252 CDK2AP2O75956 126 aa4.76□□□□□ -1.65
SOX6-210ENST00000528252 A0A1B0GVX0 72 aa4.75□□□□□ -1.65
SOX6-210ENST00000528252 ASB16-AS1Q495Z4 193 aa4.75□□□□□ -1.65
SOX6-210ENST00000528252 C8orf17Q9NRJ1 99 aa4.74□□□□□ -1.65
SOX6-210ENST00000528252 FAT1Q14517 4588 aa4.74□□□□□ -1.65
SOX6-210ENST00000528252 TP53AIP1Q9HCN2 124 aa4.74□□□□□ -1.65
SOX6-210ENST00000528252 NOTCH2NLQ7Z3S9 236 aa4.74□□□□□ -1.65
SOX6-210ENST00000528252 SPATA8Q6RVD6 105 aa4.73□□□□□ -1.65
SOX6-210ENST00000528252 TYMSOSQ8TAI1 123 aa4.73□□□□□ -1.65
SOX6-210ENST00000528252 APOBP04114 4563 aaKnown RBP4.72□□□□□ -1.65
SOX6-210ENST00000528252 A0A1B0GU69 56 aa4.71□□□□□ -1.66
SOX6-210ENST00000528252 MIR22HGQ0VDD5 57 aa4.7□□□□□ -1.66
SOX6-210ENST00000528252 KRTAP10-4P60372 401 aaPredicted RBP4.7□□□□□ -1.66
SOX6-210ENST00000528252 MRPL34Q9BQ48 92 aaKnown RBP4.69□□□□□ -1.66
SOX6-210ENST00000528252 SPINK1P00995 79 aa4.67□□□□□ -1.66
SOX6-210ENST00000528252 ACYP2P14621 99 aa4.66□□□□□ -1.66
SOX6-210ENST00000528252 Q5W150 140 aa4.66□□□□□ -1.66
SOX6-210ENST00000528252 LINC00304Q8N9R0 145 aa4.66□□□□□ -1.66
SOX6-210ENST00000528252 RYR3Q15413 4870 aa4.66□□□□□ -1.66
SOX6-210ENST00000528252 UQCR11O14957 56 aa4.65□□□□□ -1.66
SOX6-210ENST00000528252 ROMO1P60602 79 aa4.62□□□□□ -1.67
SOX6-210ENST00000528252 DMAC1Q96GE9 116 aa4.62□□□□□ -1.67
SOX6-210ENST00000528252 KRTAP13-3Q3SY46 172 aa4.61□□□□□ -1.67
SOX6-210ENST00000528252 RPS29P62273 56 aaKnown RBP4.6□□□□□ -1.67
SOX6-210ENST00000528252 Q5VSD8 79 aa4.59□□□□□ -1.67
SOX6-210ENST00000528252 HSPG2P98160 4391 aa4.59□□□□□ -1.67
SOX6-210ENST00000528252 FLG2Q5D862 2391 aaPredicted RBP4.59□□□□□ -1.68
SOX6-210ENST00000528252 KRTAP16-1A8MUX0 517 aa4.59□□□□□ -1.68
SOX6-210ENST00000528252 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
SOX6-210ENST00000528252 PKHD1L1Q86WI1 4243 aa4.56□□□□□ -1.68
SOX6-210ENST00000528252 LRP1Q07954 4544 aaKnown RBP4.56□□□□□ -1.68
SOX6-210ENST00000528252 KRTAP17-1Q9BYP8 105 aa4.56□□□□□ -1.68
SOX6-210ENST00000528252 KIAA1109Q2LD37 5005 aa4.56□□□□□ -1.68
SOX6-210ENST00000528252 DMBT1Q9UGM3 2413 aaPredicted RBP4.56□□□□□ -1.68
SOX6-210ENST00000528252 RYR1P21817 5038 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms