RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 CRCT1Q9UGL9 99 aa11.71□□□□□ -0.53
PKP3-205ENST00000527442 NREPQ16612 68 aa11.7□□□□□ -0.54
PKP3-205ENST00000527442 C1orf195Q5TG92 126 aa11.7□□□□□ -0.54
PKP3-205ENST00000527442 UBL5Q9BZL1 73 aa11.7□□□□□ -0.54
PKP3-205ENST00000527442 KRTAP4-1Q9BYQ7 146 aa11.69□□□□□ -0.54
PKP3-205ENST00000527442 KRTAP13-3Q3SY46 172 aa11.66□□□□□ -0.54
PKP3-205ENST00000527442 FP248Q71RG6 208 aaPredicted RBP11.65□□□□□ -0.54
PKP3-205ENST00000527442 FSIP2Q5CZC0 6907 aa11.65□□□□□ -0.54
PKP3-205ENST00000527442 J3KT08 172 aa11.62□□□□□ -0.55
PKP3-205ENST00000527442 IGKV4-1P06312 121 aa11.59□□□□□ -0.55
PKP3-205ENST00000527442 DEFB116Q30KQ4 102 aa11.59□□□□□ -0.55
PKP3-205ENST00000527442 SIGMAR1Q99720 223 aa11.58□□□□□ -0.56
PKP3-205ENST00000527442 BPY2O14599 106 aa11.57□□□□□ -0.56
PKP3-205ENST00000527442 SEC61BP60468 96 aaKnown RBP11.55□□□□□ -0.56
PKP3-205ENST00000527442 LINC00643Q86TS7 51 aa11.55□□□□□ -0.56
PKP3-205ENST00000527442 ATP5EP2Q5VTU8 51 aa11.54□□□□□ -0.56
PKP3-205ENST00000527442 A8MWP4 228 aa11.53□□□□□ -0.56
PKP3-205ENST00000527442 DSCR10P59022 87 aa11.53□□□□□ -0.56
PKP3-205ENST00000527442 CXCL6P80162 114 aa11.53□□□□□ -0.56
PKP3-205ENST00000527442 LCE2CQ5TA81 110 aa11.49□□□□□ -0.57
PKP3-205ENST00000527442 IGKV3D-7A0A0C4DH55 119 aa11.47□□□□□ -0.57
PKP3-205ENST00000527442 A0A1B0GVX0 72 aa11.47□□□□□ -0.57
PKP3-205ENST00000527442 NDUFB1O75438 58 aa11.47□□□□□ -0.57
PKP3-205ENST00000527442 K7EQZ3 153 aa11.45□□□□□ -0.58
PKP3-205ENST00000527442 PRR15Q8IV56 129 aa11.45□□□□□ -0.58
PKP3-205ENST00000527442 IGHV6-1A0A0B4J1U7 121 aa11.41□□□□□ -0.58
PKP3-205ENST00000527442 C8orf87E5RJ46 101 aa11.41□□□□□ -0.58
PKP3-205ENST00000527442 Q8N9L7 120 aa11.41□□□□□ -0.58
PKP3-205ENST00000527442 KRTAP19-2Q3LHN2 52 aa11.4□□□□□ -0.58
PKP3-205ENST00000527442 XP32Q5T750 250 aa11.4□□□□□ -0.58
PKP3-205ENST00000527442 MT1HP80294 61 aa11.37□□□□□ -0.59
PKP3-205ENST00000527442 C8orf17Q9NRJ1 99 aa11.36□□□□□ -0.59
PKP3-205ENST00000527442 MMP24-AS1A0A0U1RRL7 71 aa11.34□□□□□ -0.59
PKP3-205ENST00000527442 LINC00313P59037 77 aa11.34□□□□□ -0.59
PKP3-205ENST00000527442 NOTCH2NLQ7Z3S9 236 aa11.34□□□□□ -0.59
PKP3-205ENST00000527442 C9orf92A6NGG3 77 aa11.33□□□□□ -0.6
PKP3-205ENST00000527442 MT-ATP8P03928 68 aa11.33□□□□□ -0.6
PKP3-205ENST00000527442 KRTAP16-1A8MUX0 517 aa11.3□□□□□ -0.6
PKP3-205ENST00000527442 HIST1H4AP62805 103 aaKnown RBP11.3□□□□□ -0.6
PKP3-205ENST00000527442 IMUPQ9GZP8 106 aa11.3□□□□□ -0.6
PKP3-205ENST00000527442 HCG22E2RYF7 251 aa11.28□□□□□ -0.6
PKP3-205ENST00000527442 LORP23490 312 aaPredicted RBP11.26□□□□□ -0.61
PKP3-205ENST00000527442 TMEM254Q8TBM7 123 aa11.26□□□□□ -0.61
PKP3-205ENST00000527442 hDV103S1A0JD37 113 aa11.25□□□□□ -0.61
PKP3-205ENST00000527442 A0A087WVE0 104 aa11.24□□□□□ -0.61
PKP3-205ENST00000527442 CASC2Q6XLA1 102 aa11.24□□□□□ -0.61
PKP3-205ENST00000527442 PCOTHQ58A44 107 aa11.23□□□□□ -0.61
PKP3-205ENST00000527442 WFDC13Q8IUB5 93 aa11.23□□□□□ -0.61
PKP3-205ENST00000527442 KRTAP10-6P60371 365 aaPredicted RBP11.22□□□□□ -0.61
PKP3-205ENST00000527442 MRPL34Q9BQ48 92 aaKnown RBP11.22□□□□□ -0.61
PKP3-205ENST00000527442 C20orf166-AS1Q96NR2 134 aa11.21□□□□□ -0.61
PKP3-205ENST00000527442 A8MUU9 505 aa11.19□□□□□ -0.62
PKP3-205ENST00000527442 Q8N9P0 234 aaPredicted RBP11.19□□□□□ -0.62
PKP3-205ENST00000527442 Q75L30 129 aa11.17□□□□□ -0.62
PKP3-205ENST00000527442 RPL37P61927 97 aaKnown RBP11.15□□□□□ -0.62
PKP3-205ENST00000527442 M0R2T5 61 aa11.07□□□□□ -0.64
PKP3-205ENST00000527442 FAM236AA0A1B0GUQ0 79 aa11.05□□□□□ -0.64
PKP3-205ENST00000527442 FAM236BA0A1B0GV22 79 aa11.05□□□□□ -0.64
PKP3-205ENST00000527442 NDUFS5O43920 106 aa11.05□□□□□ -0.64
PKP3-205ENST00000527442 FLGP20930 4061 aaPredicted RBP11.03□□□□□ -0.64
PKP3-205ENST00000527442 TP53AIP1Q9HCN2 124 aa11.02□□□□□ -0.65
PKP3-205ENST00000527442 ZCCHC13Q8WW36 166 aaKnown RBP11□□□□□ -0.65
PKP3-205ENST00000527442 ATP11AUNQ6ZP68 121 aa10.99□□□□□ -0.65
PKP3-205ENST00000527442 OCR1Q9BZK8 76 aa10.98□□□□□ -0.65
PKP3-205ENST00000527442 KRTAP9-7A8MTY7 169 aa10.97□□□□□ -0.65
PKP3-205ENST00000527442 SCGB1A1P11684 91 aa10.97□□□□□ -0.65
PKP3-205ENST00000527442 COX6B2Q6YFQ2 88 aa10.97□□□□□ -0.65
PKP3-205ENST00000527442 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.95□□□□□ -0.66
PKP3-205ENST00000527442 ATOX1O00244 68 aa10.93□□□□□ -0.66
PKP3-205ENST00000527442 UQCRQO14949 82 aa10.93□□□□□ -0.66
PKP3-205ENST00000527442 Q5W150 140 aa10.91□□□□□ -0.66
PKP3-205ENST00000527442 SMIM20Q8N5G0 67 aa10.91□□□□□ -0.66
PKP3-205ENST00000527442 TRAV22A0A0B4J277 110 aa10.87□□□□□ -0.67
PKP3-205ENST00000527442 TRAV7A0A075B6U4 112 aa10.85□□□□□ -0.67
PKP3-205ENST00000527442 H0Y9P7 68 aa10.8□□□□□ -0.68
PKP3-205ENST00000527442 C5orf47Q569G3 176 aa10.8□□□□□ -0.68
PKP3-205ENST00000527442 SERP2Q8N6R1 65 aa10.78□□□□□ -0.68
PKP3-205ENST00000527442 MP68P56378 58 aa10.76□□□□□ -0.69
PKP3-205ENST00000527442 IGKV2-30P06310 120 aa10.75□□□□□ -0.69
PKP3-205ENST00000527442 C7orf65Q6ZTY9 151 aa10.74□□□□□ -0.69
PKP3-205ENST00000527442 SSPOA2VEC9 5147 aa10.73□□□□□ -0.69
PKP3-205ENST00000527442 H3BPC8 53 aa10.73□□□□□ -0.69
PKP3-205ENST00000527442 SPINK7P58062 85 aa10.73□□□□□ -0.69
PKP3-205ENST00000527442 LOC101927531A0A1B0GV80 90 aa10.72□□□□□ -0.69
PKP3-205ENST00000527442 USH2AO75445 5202 aa10.7□□□□□ -0.7
PKP3-205ENST00000527442 IGKV2D-30A0A075B6S6 120 aa10.7□□□□□ -0.7
PKP3-205ENST00000527442 LINC00208Q96KT6 92 aa10.69□□□□□ -0.7
PKP3-205ENST00000527442 C1orf64Q8NEQ6 169 aa10.68□□□□□ -0.7
PKP3-205ENST00000527442 ANAPC13Q9BS18 74 aa10.68□□□□□ -0.7
PKP3-205ENST00000527442 KRTAP9-8Q9BYQ0 159 aa10.67□□□□□ -0.7
PKP3-205ENST00000527442 COX7CP15954 63 aa10.66□□□□□ -0.7
PKP3-205ENST00000527442 CYP4F30PQ9H0H9 118 aa10.65□□□□□ -0.7
PKP3-205ENST00000527442 HRES1P13985 223 aa10.63□□□□□ -0.71
PKP3-205ENST00000527442 C20orf197Q8N268 126 aa10.58□□□□□ -0.72
PKP3-205ENST00000527442 MPLKIPQ8TAP9 179 aa10.57□□□□□ -0.72
PKP3-205ENST00000527442 FCGBPQ9Y6R7 5405 aaPredicted RBP10.57□□□□□ -0.72
PKP3-205ENST00000527442 KLKP1Q107X0 134 aa10.55□□□□□ -0.72
PKP3-205ENST00000527442 SNURFQ9Y675 71 aa10.53□□□□□ -0.72
PKP3-205ENST00000527442 KRTAP19-1Q8IUB9 90 aa10.5□□□□□ -0.73
PKP3-205ENST00000527442 RBM12B-AS1Q9P1G2 102 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms