RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 MOBPQ13875 183 aa7.55□□□□□ -1.2
CAPN1-208ENST00000527323 PLA2G1BP04054 148 aaKnown RBP7.55□□□□□ -1.2
CAPN1-208ENST00000527323 Q96NJ1 140 aa7.55□□□□□ -1.2
CAPN1-208ENST00000527323 KRTAP13-1Q8IUC0 172 aa7.55□□□□□ -1.2
CAPN1-208ENST00000527323 PKHD1P08F94 4074 aa7.54□□□□□ -1.2
CAPN1-208ENST00000527323 SPAG11AQ6PDA7 123 aa7.54□□□□□ -1.2
CAPN1-208ENST00000527323 DNAH11Q96DT5 4516 aa7.54□□□□□ -1.2
CAPN1-208ENST00000527323 HECTD4Q9Y4D8 3996 aa7.54□□□□□ -1.2
CAPN1-208ENST00000527323 Q6ZRN7 208 aaPredicted RBP7.53□□□□□ -1.2
CAPN1-208ENST00000527323 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.53□□□□□ -1.2
CAPN1-208ENST00000527323 SACSQ9NZJ4 4579 aa7.53□□□□□ -1.2
CAPN1-208ENST00000527323 ANAPC11Q9NYG5 84 aa7.53□□□□□ -1.2
CAPN1-208ENST00000527323 A0A1B0GVX0 72 aa7.52□□□□□ -1.21
CAPN1-208ENST00000527323 Q75L30 129 aa7.51□□□□□ -1.21
CAPN1-208ENST00000527323 C1orf134Q5TEV5 83 aa7.5□□□□□ -1.21
CAPN1-208ENST00000527323 LCA10Q71F78 164 aa7.5□□□□□ -1.21
CAPN1-208ENST00000527323 MRPL34Q9BQ48 92 aaKnown RBP7.5□□□□□ -1.21
CAPN1-208ENST00000527323 LOC101927531A0A1B0GV80 90 aa7.49□□□□□ -1.21
CAPN1-208ENST00000527323 ASB16-AS1Q495Z4 193 aa7.49□□□□□ -1.21
CAPN1-208ENST00000527323 A0A087WTM6 91 aa7.49□□□□□ -1.21
CAPN1-208ENST00000527323 KRTAP10-2P60368 255 aa7.49□□□□□ -1.21
CAPN1-208ENST00000527323 SPINK6Q6UWN8 80 aa7.49□□□□□ -1.21
CAPN1-208ENST00000527323 Q6ZR54 194 aa7.49□□□□□ -1.21
CAPN1-208ENST00000527323 ZNF706Q9Y5V0 76 aaPredicted RBP7.49□□□□□ -1.21
CAPN1-208ENST00000527323 SPACA4Q8TDM5 124 aa7.48□□□□□ -1.21
CAPN1-208ENST00000527323 A0A087X002 238 aa7.47□□□□□ -1.21
CAPN1-208ENST00000527323 NOTCH2NLQ7Z3S9 236 aa7.47□□□□□ -1.21
CAPN1-208ENST00000527323 LINC00483Q53H64 154 aa7.46□□□□□ -1.22
CAPN1-208ENST00000527323 PSORS1C2Q9UIG4 136 aa7.46□□□□□ -1.22
CAPN1-208ENST00000527323 HRES1P13985 223 aa7.46□□□□□ -1.22
CAPN1-208ENST00000527323 ATP11AUNQ6ZP68 121 aa7.46□□□□□ -1.22
CAPN1-208ENST00000527323 RTL8CO15255 209 aa7.45□□□□□ -1.22
CAPN1-208ENST00000527323 LINC01558Q9Y6Z2 57 aa7.45□□□□□ -1.22
CAPN1-208ENST00000527323 C8orf87E5RJ46 101 aa7.44□□□□□ -1.22
CAPN1-208ENST00000527323 RYR3Q15413 4870 aa7.44□□□□□ -1.22
CAPN1-208ENST00000527323 DNAH17Q9UFH2 4485 aa7.43□□□□□ -1.22
CAPN1-208ENST00000527323 IGLV5-52A0A0A0MRZ9 124 aa7.42□□□□□ -1.22
CAPN1-208ENST00000527323 DNAH5Q8TE73 4624 aa7.42□□□□□ -1.22
CAPN1-208ENST00000527323 CDC42SE1Q9NRR8 79 aa7.42□□□□□ -1.22
CAPN1-208ENST00000527323 FAT2Q9NYQ8 4349 aa7.42□□□□□ -1.22
CAPN1-208ENST00000527323 ZNF861PO60384 105 aa7.41□□□□□ -1.22
CAPN1-208ENST00000527323 KTN1-AS1Q86SY8 53 aa7.4□□□□□ -1.23
CAPN1-208ENST00000527323 CIRBP-AS1Q8TBR5 109 aa7.4□□□□□ -1.23
CAPN1-208ENST00000527323 SPINK7P58062 85 aa7.38□□□□□ -1.23
CAPN1-208ENST00000527323 Q5W150 140 aa7.38□□□□□ -1.23
CAPN1-208ENST00000527323 RBM12B-AS1Q9P1G2 102 aa7.38□□□□□ -1.23
CAPN1-208ENST00000527323 DNAH8Q96JB1 4490 aa7.38□□□□□ -1.23
CAPN1-208ENST00000527323 RYR2Q92736 4967 aa7.37□□□□□ -1.23
CAPN1-208ENST00000527323 PLAC8Q9NZF1 115 aa7.36□□□□□ -1.23
CAPN1-208ENST00000527323 PKD1P98161 4303 aa7.36□□□□□ -1.23
CAPN1-208ENST00000527323 LRP1BQ9NZR2 4599 aa7.36□□□□□ -1.23
CAPN1-208ENST00000527323 A6NN06 94 aa7.34□□□□□ -1.23
CAPN1-208ENST00000527323 ACYP2P14621 99 aa7.33□□□□□ -1.24
CAPN1-208ENST00000527323 KRTAP10-1P60331 282 aa7.33□□□□□ -1.24
CAPN1-208ENST00000527323 RETNLBQ9BQ08 111 aa7.33□□□□□ -1.24
CAPN1-208ENST00000527323 SMR3BP02814 79 aaPredicted RBP7.31□□□□□ -1.24
CAPN1-208ENST00000527323 FAT1Q14517 4588 aa7.31□□□□□ -1.24
CAPN1-208ENST00000527323 ALMS1Q8TCU4 4167 aa7.3□□□□□ -1.24
CAPN1-208ENST00000527323 IGLV7-43P04211 117 aa7.3□□□□□ -1.24
CAPN1-208ENST00000527323 FLG2Q5D862 2391 aaPredicted RBP7.27□□□□□ -1.24
CAPN1-208ENST00000527323 LINC00313P59037 77 aa7.27□□□□□ -1.25
CAPN1-208ENST00000527323 KRTAP13-3Q3SY46 172 aa7.27□□□□□ -1.25
CAPN1-208ENST00000527323 DYNC1H1Q14204 4646 aaKnown RBP7.26□□□□□ -1.25
CAPN1-208ENST00000527323 C7orf65Q6ZTY9 151 aa7.26□□□□□ -1.25
CAPN1-208ENST00000527323 SSBP3-AS1Q7Z2R9 100 aa7.25□□□□□ -1.25
CAPN1-208ENST00000527323 VPS13BQ7Z7G8 4022 aa7.25□□□□□ -1.25
CAPN1-208ENST00000527323 EPPK1P58107 5090 aaKnown RBP7.22□□□□□ -1.25
CAPN1-208ENST00000527323 A0A1B0GU69 56 aa7.21□□□□□ -1.25
CAPN1-208ENST00000527323 DMAC1Q96GE9 116 aa7.21□□□□□ -1.25
CAPN1-208ENST00000527323 KIAA1109Q2LD37 5005 aa7.19□□□□□ -1.26
CAPN1-208ENST00000527323 IGKV2-30P06310 120 aa7.17□□□□□ -1.26
CAPN1-208ENST00000527323 IGKV2D-30A0A075B6S6 120 aa7.16□□□□□ -1.26
CAPN1-208ENST00000527323 APOBP04114 4563 aaKnown RBP7.15□□□□□ -1.27
CAPN1-208ENST00000527323 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
CAPN1-208ENST00000527323 PRAC1Q96KF2 57 aa7.12□□□□□ -1.27
CAPN1-208ENST00000527323 SEC61BP60468 96 aaKnown RBP7.1□□□□□ -1.27
CAPN1-208ENST00000527323 MIR22HGQ0VDD5 57 aa7.09□□□□□ -1.27
CAPN1-208ENST00000527323 UQCR11O14957 56 aa7.09□□□□□ -1.27
CAPN1-208ENST00000527323 DMBT1Q9UGM3 2413 aaPredicted RBP7.08□□□□□ -1.28
CAPN1-208ENST00000527323 SPATA8Q6RVD6 105 aa7.07□□□□□ -1.28
CAPN1-208ENST00000527323 A0A1B0GVY2 172 aa7.07□□□□□ -1.28
CAPN1-208ENST00000527323 ADM2Q7Z4H4 148 aa7.07□□□□□ -1.28
CAPN1-208ENST00000527323 KRTAP16-1A8MUX0 517 aa7.07□□□□□ -1.28
CAPN1-208ENST00000527323 LRP1Q07954 4544 aaKnown RBP7.06□□□□□ -1.28
CAPN1-208ENST00000527323 SPINK1P00995 79 aa7.06□□□□□ -1.28
CAPN1-208ENST00000527323 Q6ZSA8 131 aa7.05□□□□□ -1.28
CAPN1-208ENST00000527323 MYCBP2O75592 4640 aa7.04□□□□□ -1.28
CAPN1-208ENST00000527323 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
CAPN1-208ENST00000527323 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
CAPN1-208ENST00000527323 KRTAP3-2Q9BYR7 98 aa7.01□□□□□ -1.29
CAPN1-208ENST00000527323 Q8N1X5 172 aa7□□□□□ -1.29
CAPN1-208ENST00000527323 TYMSOSQ8TAI1 123 aa6.99□□□□□ -1.29
CAPN1-208ENST00000527323 HSPG2P98160 4391 aa6.98□□□□□ -1.29
CAPN1-208ENST00000527323 KRTAP1-4P0C5Y4 121 aa6.97□□□□□ -1.29
CAPN1-208ENST00000527323 RYR1P21817 5038 aa6.93□□□□□ -1.3
CAPN1-208ENST00000527323 LINC01554Q52M75 96 aa6.91□□□□□ -1.3
CAPN1-208ENST00000527323 CSAG1Q6PB30 78 aa6.88□□□□□ -1.31
CAPN1-208ENST00000527323 FAT3Q8TDW7 4589 aa6.87□□□□□ -1.31
CAPN1-208ENST00000527323 Q5VSD8 79 aa6.87□□□□□ -1.31
CAPN1-208ENST00000527323 LINC00304Q8N9R0 145 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms