RNA–Protein interactions for RNA: ENST00000526938.5

CTNND1-215, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-215ENST00000526938 MMP24-AS1A0A0U1RRL7 71 aa5.1□□□□□ -1.59
CTNND1-215ENST00000526938 A0A1B0GVX0 72 aa5.1□□□□□ -1.59
CTNND1-215ENST00000526938 TRAV22A0A0B4J277 110 aa5.09□□□□□ -1.59
CTNND1-215ENST00000526938 KRTAP29-1A8MX34 341 aaPredicted RBP5.09□□□□□ -1.59
CTNND1-215ENST00000526938 DNAH11Q96DT5 4516 aa5.09□□□□□ -1.6
CTNND1-215ENST00000526938 PSPHP1O15172 72 aa5.08□□□□□ -1.6
CTNND1-215ENST00000526938 SSBP3-AS1Q7Z2R9 100 aa5.08□□□□□ -1.6
CTNND1-215ENST00000526938 A6NN06 94 aa5.08□□□□□ -1.6
CTNND1-215ENST00000526938 DNAH2Q9P225 4427 aa5.08□□□□□ -1.6
CTNND1-215ENST00000526938 TYMSOSQ8TAI1 123 aa5.07□□□□□ -1.6
CTNND1-215ENST00000526938 Q96NJ1 140 aa5.07□□□□□ -1.6
CTNND1-215ENST00000526938 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
CTNND1-215ENST00000526938 MRPL34Q9BQ48 92 aaKnown RBP5.07□□□□□ -1.6
CTNND1-215ENST00000526938 KRTAP3-3Q9BYR6 98 aa5.06□□□□□ -1.6
CTNND1-215ENST00000526938 KRTAP3-2Q9BYR7 98 aa5.06□□□□□ -1.6
CTNND1-215ENST00000526938 FRAS1Q86XX4 4008 aa5.06□□□□□ -1.6
CTNND1-215ENST00000526938 DMBT1Q9UGM3 2413 aaPredicted RBP5.05□□□□□ -1.6
CTNND1-215ENST00000526938 FLG2Q5D862 2391 aaPredicted RBP5.04□□□□□ -1.6
CTNND1-215ENST00000526938 DYNC2H1Q8NCM8 4307 aaKnown RBP5.04□□□□□ -1.6
CTNND1-215ENST00000526938 KRTAP13-2Q52LG2 175 aa5.04□□□□□ -1.6
CTNND1-215ENST00000526938 LINC00313P59037 77 aa5.03□□□□□ -1.6
CTNND1-215ENST00000526938 Q5VV11 94 aa5.03□□□□□ -1.6
CTNND1-215ENST00000526938 A8MUN3 132 aa5.03□□□□□ -1.6
CTNND1-215ENST00000526938 DNAH6Q9C0G6 4158 aa5.02□□□□□ -1.61
CTNND1-215ENST00000526938 KRTAP21-3Q3LHN1 58 aa5.02□□□□□ -1.61
CTNND1-215ENST00000526938 TP53AIP1Q9HCN2 124 aa5.02□□□□□ -1.61
CTNND1-215ENST00000526938 DNAH17Q9UFH2 4485 aa5.02□□□□□ -1.61
CTNND1-215ENST00000526938 Q6ZSA8 131 aa5.02□□□□□ -1.61
CTNND1-215ENST00000526938 ZCCHC13Q8WW36 166 aaKnown RBP5.02□□□□□ -1.61
CTNND1-215ENST00000526938 LCA10Q71F78 164 aa5.01□□□□□ -1.61
CTNND1-215ENST00000526938 LCE6AA0A183 80 aa5□□□□□ -1.61
CTNND1-215ENST00000526938 HYDINQ4G0P3 5121 aa5□□□□□ -1.61
CTNND1-215ENST00000526938 DNAH8Q96JB1 4490 aa5□□□□□ -1.61
CTNND1-215ENST00000526938 LRP1BQ9NZR2 4599 aa4.99□□□□□ -1.61
CTNND1-215ENST00000526938 LIMD2Q9BT23 127 aa4.99□□□□□ -1.61
CTNND1-215ENST00000526938 HECTD4Q9Y4D8 3996 aa4.98□□□□□ -1.61
CTNND1-215ENST00000526938 IGKV2D-30A0A075B6S6 120 aa4.98□□□□□ -1.61
CTNND1-215ENST00000526938 IGKV2-30P06310 120 aa4.98□□□□□ -1.61
CTNND1-215ENST00000526938 H3BPC8 53 aa4.98□□□□□ -1.61
CTNND1-215ENST00000526938 Q5W150 140 aa4.98□□□□□ -1.61
CTNND1-215ENST00000526938 LINC00304Q8N9R0 145 aa4.97□□□□□ -1.61
CTNND1-215ENST00000526938 KRTAP1-4P0C5Y4 121 aa4.96□□□□□ -1.61
CTNND1-215ENST00000526938 C7orf65Q6ZTY9 151 aa4.96□□□□□ -1.62
CTNND1-215ENST00000526938 C9orf92A6NGG3 77 aa4.95□□□□□ -1.62
CTNND1-215ENST00000526938 Q8N9P0 234 aaPredicted RBP4.95□□□□□ -1.62
CTNND1-215ENST00000526938 DNAH5Q8TE73 4624 aa4.95□□□□□ -1.62
CTNND1-215ENST00000526938 SPTSSBQ8NFR3 76 aa4.94□□□□□ -1.62
CTNND1-215ENST00000526938 ATP11AUNQ6ZP68 121 aa4.93□□□□□ -1.62
CTNND1-215ENST00000526938 COA5Q86WW8 74 aa4.93□□□□□ -1.62
CTNND1-215ENST00000526938 SPINK1P00995 79 aa4.93□□□□□ -1.62
CTNND1-215ENST00000526938 CHKB-CPT1BH3BT56 60 aa4.92□□□□□ -1.62
CTNND1-215ENST00000526938 SPAG11AQ6PDA7 123 aa4.92□□□□□ -1.62
CTNND1-215ENST00000526938 CYP4F30PQ9H0H9 118 aa4.92□□□□□ -1.62
CTNND1-215ENST00000526938 FAT1Q14517 4588 aa4.91□□□□□ -1.62
CTNND1-215ENST00000526938 LOC101927531A0A1B0GV80 90 aa4.91□□□□□ -1.62
CTNND1-215ENST00000526938 FAM229AH3BQW9 127 aa4.91□□□□□ -1.62
CTNND1-215ENST00000526938 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
CTNND1-215ENST00000526938 PRR15LQ9BU68 103 aa4.91□□□□□ -1.62
CTNND1-215ENST00000526938 IGLV7-46A0A075B6I9 117 aa4.9□□□□□ -1.62
CTNND1-215ENST00000526938 SPANXA2-OT1Q8N9U9 137 aa4.9□□□□□ -1.62
CTNND1-215ENST00000526938 ASB16-AS1Q495Z4 193 aa4.89□□□□□ -1.63
CTNND1-215ENST00000526938 ADM2Q7Z4H4 148 aa4.89□□□□□ -1.63
CTNND1-215ENST00000526938 PKHD1P08F94 4074 aa4.87□□□□□ -1.63
CTNND1-215ENST00000526938 HRES1P13985 223 aa4.87□□□□□ -1.63
CTNND1-215ENST00000526938 VPS13BQ7Z7G8 4022 aa4.87□□□□□ -1.63
CTNND1-215ENST00000526938 LINC01554Q52M75 96 aa4.87□□□□□ -1.63
CTNND1-215ENST00000526938 SACSQ9NZJ4 4579 aa4.85□□□□□ -1.63
CTNND1-215ENST00000526938 Q75L30 129 aa4.84□□□□□ -1.63
CTNND1-215ENST00000526938 DYNC1H1Q14204 4646 aaKnown RBP4.84□□□□□ -1.63
CTNND1-215ENST00000526938 A0A1B0GVY2 172 aa4.84□□□□□ -1.63
CTNND1-215ENST00000526938 FAT2Q9NYQ8 4349 aa4.84□□□□□ -1.64
CTNND1-215ENST00000526938 A6NED7 52 aa4.83□□□□□ -1.64
CTNND1-215ENST00000526938 ACYP2P14621 99 aa4.83□□□□□ -1.64
CTNND1-215ENST00000526938 Q8N1X5 172 aa4.83□□□□□ -1.64
CTNND1-215ENST00000526938 CDC42SE1Q9NRR8 79 aa4.83□□□□□ -1.64
CTNND1-215ENST00000526938 ALMS1Q8TCU4 4167 aa4.82□□□□□ -1.64
CTNND1-215ENST00000526938 Q5VSD8 79 aa4.81□□□□□ -1.64
CTNND1-215ENST00000526938 KMT2CQ8NEZ4 4911 aaKnown RBP4.8□□□□□ -1.64
CTNND1-215ENST00000526938 KRTAP16-1A8MUX0 517 aa4.78□□□□□ -1.64
CTNND1-215ENST00000526938 PKD1P98161 4303 aa4.77□□□□□ -1.65
CTNND1-215ENST00000526938 KRTAP13-3Q3SY46 172 aa4.77□□□□□ -1.65
CTNND1-215ENST00000526938 SPINK7P58062 85 aa4.75□□□□□ -1.65
CTNND1-215ENST00000526938 A0A0A0MQY5 61 aa4.73□□□□□ -1.65
CTNND1-215ENST00000526938 DMAC1Q96GE9 116 aa4.72□□□□□ -1.65
CTNND1-215ENST00000526938 A0A1B0GU69 56 aa4.72□□□□□ -1.65
CTNND1-215ENST00000526938 KRTAP10-4P60372 401 aaPredicted RBP4.72□□□□□ -1.65
CTNND1-215ENST00000526938 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
CTNND1-215ENST00000526938 RPS29P62273 56 aaKnown RBP4.7□□□□□ -1.66
CTNND1-215ENST00000526938 LINC01558Q9Y6Z2 57 aa4.7□□□□□ -1.66
CTNND1-215ENST00000526938 LRP1Q07954 4544 aaKnown RBP4.69□□□□□ -1.66
CTNND1-215ENST00000526938 RYR2Q92736 4967 aa4.69□□□□□ -1.66
CTNND1-215ENST00000526938 MYCBP2O75592 4640 aa4.67□□□□□ -1.66
CTNND1-215ENST00000526938 KIAA1109Q2LD37 5005 aa4.67□□□□□ -1.66
CTNND1-215ENST00000526938 A8MUU9 505 aa4.64□□□□□ -1.67
CTNND1-215ENST00000526938 C20orf166-AS1Q96NR2 134 aa4.64□□□□□ -1.67
CTNND1-215ENST00000526938 CSAG1Q6PB30 78 aa4.63□□□□□ -1.67
CTNND1-215ENST00000526938 RYR3Q15413 4870 aa4.63□□□□□ -1.67
CTNND1-215ENST00000526938 KRTAP10-8P60410 259 aa4.62□□□□□ -1.67
CTNND1-215ENST00000526938 KRTAP17-1Q9BYP8 105 aa4.59□□□□□ -1.67
CTNND1-215ENST00000526938 P0C880 135 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms