RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 HIGD1BQ9P298 99 aa2.23□□□□□ -2.05
COPB1-204ENST00000526191 TRAPPC1Q9Y5R8 145 aa2.23□□□□□ -2.05
COPB1-204ENST00000526191 C3orf79P0CE67 100 aa2.22□□□□□ -2.05
COPB1-204ENST00000526191 COX8AP10176 69 aa2.22□□□□□ -2.05
COPB1-204ENST00000526191 Q1T7F1 81 aa2.22□□□□□ -2.05
COPB1-204ENST00000526191 SPANXN1Q5VSR9 72 aa2.22□□□□□ -2.05
COPB1-204ENST00000526191 LINC00643Q86TS7 51 aa2.22□□□□□ -2.05
COPB1-204ENST00000526191 ZCCHC13Q8WW36 166 aaKnown RBP2.22□□□□□ -2.05
COPB1-204ENST00000526191 ARL2-SNX15V9GYD0 113 aa2.22□□□□□ -2.05
COPB1-204ENST00000526191 A6NED7 52 aa2.21□□□□□ -2.06
COPB1-204ENST00000526191 ARMS2P0C7Q2 107 aa2.21□□□□□ -2.06
COPB1-204ENST00000526191 C9orf116Q5BN46 136 aaPredicted RBP2.21□□□□□ -2.06
COPB1-204ENST00000526191 TOMM5Q8N4H5 51 aa2.21□□□□□ -2.06
COPB1-204ENST00000526191 SMIM7Q9BQ49 75 aa2.21□□□□□ -2.06
COPB1-204ENST00000526191 C11orf1Q9H5F2 150 aa2.21□□□□□ -2.06
COPB1-204ENST00000526191 LINC00474Q9P2X8 69 aa2.21□□□□□ -2.06
COPB1-204ENST00000526191 LENEPQ9Y5L5 61 aa2.21□□□□□ -2.06
COPB1-204ENST00000526191 TRBV25-1A0A075B6N4 114 aa2.2□□□□□ -2.06
COPB1-204ENST00000526191 TRBV6-1A0A0K0K1D8 114 aa2.2□□□□□ -2.06
COPB1-204ENST00000526191 XCL1P47992 114 aa2.2□□□□□ -2.06
COPB1-204ENST00000526191 SSBP1Q04837 148 aaKnown RBP2.2□□□□□ -2.06
COPB1-204ENST00000526191 C2orf91Q6ZV80 131 aa2.2□□□□□ -2.06
COPB1-204ENST00000526191 TMEM141Q96I45 108 aa2.2□□□□□ -2.06
COPB1-204ENST00000526191 CYSTM1Q9H1C7 97 aa2.2□□□□□ -2.06
COPB1-204ENST00000526191 GNG13Q9P2W3 67 aa2.2□□□□□ -2.06
COPB1-204ENST00000526191 NDUFA12Q9UI09 145 aa2.2□□□□□ -2.06
COPB1-204ENST00000526191 TRAV13-2A0A0B4J235 113 aa2.19□□□□□ -2.06
COPB1-204ENST00000526191 hDV103S1A0JD37 113 aa2.19□□□□□ -2.06
COPB1-204ENST00000526191 SLC25A20O43772 301 aa2.19□□□□□ -2.06
COPB1-204ENST00000526191 NPYP01303 97 aa2.19□□□□□ -2.06
COPB1-204ENST00000526191 MGPP08493 103 aa2.19□□□□□ -2.06
COPB1-204ENST00000526191 GVQW2A0A096LPI5 108 aaPredicted RBP2.18□□□□□ -2.06
COPB1-204ENST00000526191 TRBV10-1A0A0K0K1A3 114 aa2.18□□□□□ -2.06
COPB1-204ENST00000526191 BCE1O60756 84 aa2.18□□□□□ -2.06
COPB1-204ENST00000526191 SH2D1AO60880 128 aa2.18□□□□□ -2.06
COPB1-204ENST00000526191 GCHFRP30047 84 aa2.18□□□□□ -2.06
COPB1-204ENST00000526191 CRIP1P50238 77 aa2.18□□□□□ -2.06
COPB1-204ENST00000526191 SPTSSBQ8NFR3 76 aa2.18□□□□□ -2.06
COPB1-204ENST00000526191 NHP2Q9NX24 153 aaKnown RBP2.18□□□□□ -2.06
COPB1-204ENST00000526191 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.17□□□□□ -2.06
COPB1-204ENST00000526191 IGKV2-29A2NJV5 120 aaPredicted RBP2.17□□□□□ -2.06
COPB1-204ENST00000526191 C19orf71A6NCJ1 209 aa2.17□□□□□ -2.06
COPB1-204ENST00000526191 A8MWP4 228 aa2.17□□□□□ -2.06
COPB1-204ENST00000526191 H7BZZ5 65 aa2.17□□□□□ -2.06
COPB1-204ENST00000526191 ARL14EPLP0DKL9 152 aa2.17□□□□□ -2.06
COPB1-204ENST00000526191 RPL28P46779 137 aaKnown RBP2.17□□□□□ -2.06
COPB1-204ENST00000526191 MT1HP80294 61 aa2.17□□□□□ -2.06
COPB1-204ENST00000526191 KLKP1Q107X0 134 aa2.17□□□□□ -2.06
COPB1-204ENST00000526191 SMCR5Q8TEV8 140 aa2.17□□□□□ -2.06
COPB1-204ENST00000526191 TIMM21Q9BVV7 248 aa2.17□□□□□ -2.06
COPB1-204ENST00000526191 IGKV2D-26A0A0A0MRZ7 120 aa2.16□□□□□ -2.06
COPB1-204ENST00000526191 HCG22E2RYF7 251 aa2.16□□□□□ -2.06
COPB1-204ENST00000526191 M0R2T5 61 aa2.16□□□□□ -2.06
COPB1-204ENST00000526191 TPRXLQ17RH7 258 aa2.16□□□□□ -2.06
COPB1-204ENST00000526191 FAM19A2Q8N3H0 131 aa2.16□□□□□ -2.06
COPB1-204ENST00000526191 CYP4F30PQ9H0H9 118 aa2.16□□□□□ -2.06
COPB1-204ENST00000526191 A0A0B4J2C4 111 aa2.15□□□□□ -2.07
COPB1-204ENST00000526191 TRBV10-3A0A0K0K1G6 114 aa2.15□□□□□ -2.07
COPB1-204ENST00000526191 CASC2Q6XLA1 102 aa2.15□□□□□ -2.07
COPB1-204ENST00000526191 Q86TA4 180 aa2.15□□□□□ -2.07
COPB1-204ENST00000526191 PRO1854Q9UHT4 67 aa2.15□□□□□ -2.07
COPB1-204ENST00000526191 SYNE2Q8WXH0 6885 aaKnown RBP2.15□□□□□ -2.07
COPB1-204ENST00000526191 MYMXA0A1B0GTQ4 84 aa2.14□□□□□ -2.07
COPB1-204ENST00000526191 SFTA2Q6UW10 78 aa2.14□□□□□ -2.07
COPB1-204ENST00000526191 C20orf197Q8N268 126 aa2.14□□□□□ -2.07
COPB1-204ENST00000526191 PPP1R1CQ8WVI7 109 aa2.14□□□□□ -2.07
COPB1-204ENST00000526191 IFI27L1Q96BM0 104 aa2.14□□□□□ -2.07
COPB1-204ENST00000526191 TRBV10-2A0A0K0K1G8 114 aa2.13□□□□□ -2.07
COPB1-204ENST00000526191 LINC00959A0A1B0GUT2 108 aa2.13□□□□□ -2.07
COPB1-204ENST00000526191 F8WEM9 126 aa2.13□□□□□ -2.07
COPB1-204ENST00000526191 M0QY20 66 aa2.13□□□□□ -2.07
COPB1-204ENST00000526191 FXYD2P54710 66 aa2.13□□□□□ -2.07
COPB1-204ENST00000526191 ROMO1P60602 79 aa2.13□□□□□ -2.07
COPB1-204ENST00000526191 KRTAP19-2Q3LHN2 52 aa2.13□□□□□ -2.07
COPB1-204ENST00000526191 Q8NDZ9 215 aa2.13□□□□□ -2.07
COPB1-204ENST00000526191 CDC42SE1Q9NRR8 79 aa2.13□□□□□ -2.07
COPB1-204ENST00000526191 USH2AO75445 5202 aa2.13□□□□□ -2.07
COPB1-204ENST00000526191 TRAV7A0A075B6U4 112 aa2.12□□□□□ -2.07
COPB1-204ENST00000526191 TRAV22A0A0B4J277 110 aa2.12□□□□□ -2.07
COPB1-204ENST00000526191 ZNF815PA8K554 130 aa2.12□□□□□ -2.07
COPB1-204ENST00000526191 CHKB-CPT1BH3BT56 60 aa2.12□□□□□ -2.07
COPB1-204ENST00000526191 COX6CP09669 75 aa2.12□□□□□ -2.07
COPB1-204ENST00000526191 IFI27P40305 119 aaPredicted RBP2.12□□□□□ -2.07
COPB1-204ENST00000526191 SPAG11BQ08648 103 aa2.12□□□□□ -2.07
COPB1-204ENST00000526191 ATXN8Q156A1 80 aa2.12□□□□□ -2.07
COPB1-204ENST00000526191 KRTAP25-1Q3LHN0 102 aa2.12□□□□□ -2.07
COPB1-204ENST00000526191 FAM229BQ4G0N7 80 aa2.12□□□□□ -2.07
COPB1-204ENST00000526191 Q6JHZ5 121 aa2.12□□□□□ -2.07
COPB1-204ENST00000526191 LYZL1Q6UWQ5 148 aa2.12□□□□□ -2.07
COPB1-204ENST00000526191 Q6ZQT0 140 aa2.12□□□□□ -2.07
COPB1-204ENST00000526191 RPL39LQ96EH5 51 aaKnown RBP2.12□□□□□ -2.07
COPB1-204ENST00000526191 C14orf132Q9NPU4 83 aa2.12□□□□□ -2.07
COPB1-204ENST00000526191 MACF1Q9UPN3 7388 aaKnown RBP2.11□□□□□ -2.07
COPB1-204ENST00000526191 SDHAF1A6NFY7 115 aa2.11□□□□□ -2.07
COPB1-204ENST00000526191 H3BQ85 93 aa2.11□□□□□ -2.07
COPB1-204ENST00000526191 LEPROTL1O95214 131 aa2.11□□□□□ -2.07
COPB1-204ENST00000526191 UNQ6190/PRO20217Q6UXQ8 127 aa2.11□□□□□ -2.07
COPB1-204ENST00000526191 LIMD2Q9BT23 127 aa2.11□□□□□ -2.07
COPB1-204ENST00000526191 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
COPB1-204ENST00000526191 FCGBPQ9Y6R7 5405 aaPredicted RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms