RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 SCGB1C2P0DMR2 95 aa2.86□□□□□ -1.95
SVIP-202ENST00000525670 IGFL1Q6UW32 110 aa2.86□□□□□ -1.95
SVIP-202ENST00000525670 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.86□□□□□ -1.95
SVIP-202ENST00000525670 LIMD2Q9BT23 127 aa2.86□□□□□ -1.95
SVIP-202ENST00000525670 MUC2Q02817 5179 aa2.85□□□□□ -1.95
SVIP-202ENST00000525670 M0R143 59 aa2.85□□□□□ -1.95
SVIP-202ENST00000525670 H0YGX0 51 aa2.84□□□□□ -1.95
SVIP-202ENST00000525670 MTURNQ8N3F0 131 aa2.84□□□□□ -1.95
SVIP-202ENST00000525670 VPS25Q9BRG1 176 aa2.84□□□□□ -1.95
SVIP-202ENST00000525670 ORMDL1Q9P0S3 153 aa2.84□□□□□ -1.95
SVIP-202ENST00000525670 PCP4L1A6NKN8 68 aa2.83□□□□□ -1.96
SVIP-202ENST00000525670 H3BMG7 143 aa2.83□□□□□ -1.96
SVIP-202ENST00000525670 SNCGO76070 127 aa2.83□□□□□ -1.96
SVIP-202ENST00000525670 COX6CP09669 75 aa2.83□□□□□ -1.96
SVIP-202ENST00000525670 NDUFV3P56181 108 aaKnown RBP2.83□□□□□ -1.96
SVIP-202ENST00000525670 TPRXLQ17RH7 258 aa2.83□□□□□ -1.96
SVIP-202ENST00000525670 OCIAD2Q56VL3 154 aa2.83□□□□□ -1.96
SVIP-202ENST00000525670 FP248Q71RG6 208 aaPredicted RBP2.83□□□□□ -1.96
SVIP-202ENST00000525670 A0A087WSZ3 146 aa2.82□□□□□ -1.96
SVIP-202ENST00000525670 TRBV7-7A0A0K0K1E9 115 aa2.82□□□□□ -1.96
SVIP-202ENST00000525670 LST1O00453 97 aa2.82□□□□□ -1.96
SVIP-202ENST00000525670 TCL1BO95988 128 aa2.82□□□□□ -1.96
SVIP-202ENST00000525670 C1orf195Q5TG92 126 aa2.82□□□□□ -1.96
SVIP-202ENST00000525670 RPS29P62273 56 aaKnown RBP2.81□□□□□ -1.96
SVIP-202ENST00000525670 Q6JHZ5 121 aa2.81□□□□□ -1.96
SVIP-202ENST00000525670 SIGMAR1Q99720 223 aa2.81□□□□□ -1.96
SVIP-202ENST00000525670 IGLV8-61A0A075B6I0 122 aa2.8□□□□□ -1.96
SVIP-202ENST00000525670 A0A1W2PNM2 257 aa2.8□□□□□ -1.96
SVIP-202ENST00000525670 CD164Q04900 197 aa2.8□□□□□ -1.96
SVIP-202ENST00000525670 ATXN8Q156A1 80 aa2.8□□□□□ -1.96
SVIP-202ENST00000525670 DEFB116Q30KQ4 102 aa2.8□□□□□ -1.96
SVIP-202ENST00000525670 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
SVIP-202ENST00000525670 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
SVIP-202ENST00000525670 PPDPFLQ8WWR9 84 aa2.8□□□□□ -1.96
SVIP-202ENST00000525670 A0A1B0GX51 115 aa2.79□□□□□ -1.96
SVIP-202ENST00000525670 C9JAW5 83 aa2.79□□□□□ -1.96
SVIP-202ENST00000525670 TAX1BP3O14907 124 aa2.79□□□□□ -1.96
SVIP-202ENST00000525670 TRACP01848 142 aa2.79□□□□□ -1.96
SVIP-202ENST00000525670 BAALC-AS2P0C853 105 aa2.79□□□□□ -1.96
SVIP-202ENST00000525670 ANKRD29Q8N6D5 301 aa2.79□□□□□ -1.96
SVIP-202ENST00000525670 OBSCN-AS1Q96MR7 158 aa2.79□□□□□ -1.96
SVIP-202ENST00000525670 FAT4Q6V0I7 4981 aa2.78□□□□□ -1.96
SVIP-202ENST00000525670 CCKP06307 115 aa2.78□□□□□ -1.96
SVIP-202ENST00000525670 PCOTHQ58A44 107 aa2.78□□□□□ -1.96
SVIP-202ENST00000525670 KRTAP4-1Q9BYQ7 146 aa2.78□□□□□ -1.96
SVIP-202ENST00000525670 A0A1W2PPM0 123 aa2.77□□□□□ -1.97
SVIP-202ENST00000525670 TMEM256-PLSCR3K7ERE1 68 aa2.77□□□□□ -1.97
SVIP-202ENST00000525670 TEN1Q86WV5 123 aa2.77□□□□□ -1.97
SVIP-202ENST00000525670 C14orf132Q9NPU4 83 aa2.77□□□□□ -1.97
SVIP-202ENST00000525670 SS18L2Q9UHA2 77 aa2.77□□□□□ -1.97
SVIP-202ENST00000525670 RBM3P98179 157 aaKnown RBP2.76□□□□□ -1.97
SVIP-202ENST00000525670 LYRM7Q5U5X0 104 aa2.76□□□□□ -1.97
SVIP-202ENST00000525670 Q96NJ1 140 aa2.76□□□□□ -1.97
SVIP-202ENST00000525670 DSCR8Q96T75 97 aa2.76□□□□□ -1.97
SVIP-202ENST00000525670 OCR1Q9BZK8 76 aa2.76□□□□□ -1.97
SVIP-202ENST00000525670 SPCS1Q9Y6A9 102 aa2.76□□□□□ -1.97
SVIP-202ENST00000525670 IGKV4-1P06312 121 aa2.75□□□□□ -1.97
SVIP-202ENST00000525670 Q5XG85 94 aa2.75□□□□□ -1.97
SVIP-202ENST00000525670 IGHV6-1A0A0B4J1U7 121 aa2.74□□□□□ -1.97
SVIP-202ENST00000525670 TRBV7-4A0A0J9YYF1 115 aa2.74□□□□□ -1.97
SVIP-202ENST00000525670 ASB16-AS1Q495Z4 193 aa2.74□□□□□ -1.97
SVIP-202ENST00000525670 Q6Q795 121 aa2.74□□□□□ -1.97
SVIP-202ENST00000525670 RPL37P61927 97 aaKnown RBP2.73□□□□□ -1.97
SVIP-202ENST00000525670 COL5A1-AS1Q5SY13 56 aa2.73□□□□□ -1.97
SVIP-202ENST00000525670 Q6ZQT0 140 aa2.73□□□□□ -1.97
SVIP-202ENST00000525670 TRBV20-1A0A075B6N2 111 aa2.72□□□□□ -1.97
SVIP-202ENST00000525670 H3BQ85 93 aa2.72□□□□□ -1.97
SVIP-202ENST00000525670 A0A0U1RQV1 116 aa2.71□□□□□ -1.98
SVIP-202ENST00000525670 K7EP34 96 aa2.71□□□□□ -1.98
SVIP-202ENST00000525670 JMJD7-PLA2G4BH0Y9G9 81 aa2.7□□□□□ -1.98
SVIP-202ENST00000525670 H3BT86 120 aa2.7□□□□□ -1.98
SVIP-202ENST00000525670 LINC00472Q9H8W2 130 aa2.7□□□□□ -1.98
SVIP-202ENST00000525670 LOC110117498A0A087WWA1 95 aa2.69□□□□□ -1.98
SVIP-202ENST00000525670 A0A1B0GVX0 72 aa2.69□□□□□ -1.98
SVIP-202ENST00000525670 LINC00313P59037 77 aa2.69□□□□□ -1.98
SVIP-202ENST00000525670 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
SVIP-202ENST00000525670 COX6B2Q6YFQ2 88 aa2.68□□□□□ -1.98
SVIP-202ENST00000525670 ATP11AUNQ6ZP68 121 aa2.68□□□□□ -1.98
SVIP-202ENST00000525670 Q8N9L7 120 aa2.68□□□□□ -1.98
SVIP-202ENST00000525670 K7EQZ3 153 aa2.67□□□□□ -1.98
SVIP-202ENST00000525670 NREPQ16612 68 aa2.67□□□□□ -1.98
SVIP-202ENST00000525670 IGKV3D-7A0A0C4DH55 119 aa2.66□□□□□ -1.98
SVIP-202ENST00000525670 A8MUU9 505 aa2.66□□□□□ -1.98
SVIP-202ENST00000525670 BPY2O14599 106 aa2.66□□□□□ -1.98
SVIP-202ENST00000525670 GTF2H5Q6ZYL4 71 aa2.66□□□□□ -1.98
SVIP-202ENST00000525670 C20orf166-AS1Q96NR2 134 aa2.66□□□□□ -1.98
SVIP-202ENST00000525670 C8orf17Q9NRJ1 99 aa2.66□□□□□ -1.98
SVIP-202ENST00000525670 A8MWP4 228 aa2.65□□□□□ -1.99
SVIP-202ENST00000525670 NDUFS5O43920 106 aa2.65□□□□□ -1.99
SVIP-202ENST00000525670 NDUFB1O75438 58 aa2.65□□□□□ -1.99
SVIP-202ENST00000525670 PDE6GP18545 87 aa2.65□□□□□ -1.99
SVIP-202ENST00000525670 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.99
SVIP-202ENST00000525670 ETDBQ3ZM63 59 aa2.65□□□□□ -1.99
SVIP-202ENST00000525670 Q6ZVQ6 151 aa2.65□□□□□ -1.99
SVIP-202ENST00000525670 WFDC13Q8IUB5 93 aa2.65□□□□□ -1.99
SVIP-202ENST00000525670 MMP24-AS1A0A0U1RRL7 71 aa2.64□□□□□ -1.99
SVIP-202ENST00000525670 A0A1B0GV90 55 aa2.64□□□□□ -1.99
SVIP-202ENST00000525670 C8orf87E5RJ46 101 aa2.64□□□□□ -1.99
SVIP-202ENST00000525670 J3KT08 172 aa2.64□□□□□ -1.99
SVIP-202ENST00000525670 FAM236DA0A1B0GTK5 79 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms