RNA–Protein interactions for RNA: ENST00000524415.1

SUB1P1-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 1, humanhuman

BASIC

Gene SUB1P1, Length 382 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P1-201ENST00000524415 KRTAP8-1Q8IUC2 63 aa0.78□□□□□ -2.28
SUB1P1-201ENST00000524415 NCOR1O75376 2440 aa0.78□□□□□ -2.28
SUB1P1-201ENST00000524415 DMBT1Q9UGM3 2413 aaPredicted RBP0.78□□□□□ -2.28
SUB1P1-201ENST00000524415 TNRC18O15417 2968 aaPredicted RBP0.78□□□□□ -2.29
SUB1P1-201ENST00000524415 PKD1L2Q7Z442 2459 aa0.77□□□□□ -2.29
SUB1P1-201ENST00000524415 GVINP1Q7Z2Y8 2422 aa0.77□□□□□ -2.29
SUB1P1-201ENST00000524415 CCDC168Q8NDH2 2452 aa0.76□□□□□ -2.29
SUB1P1-201ENST00000524415 CHD6Q8TD26 2715 aa0.75□□□□□ -2.29
SUB1P1-201ENST00000524415 MAP1BP46821 2468 aaKnown RBP0.75□□□□□ -2.29
SUB1P1-201ENST00000524415 NAV2Q8IVL1 2488 aa0.75□□□□□ -2.29
SUB1P1-201ENST00000524415 VPS13DQ5THJ4 4388 aa0.75□□□□□ -2.29
SUB1P1-201ENST00000524415 CEP250Q9BV73 2442 aa0.75□□□□□ -2.29
SUB1P1-201ENST00000524415 KRTAP5-10Q6L8G5 202 aa0.75□□□□□ -2.29
SUB1P1-201ENST00000524415 VWFP04275 2813 aa0.75□□□□□ -2.29
SUB1P1-201ENST00000524415 UBR5O95071 2799 aaPredicted RBP0.75□□□□□ -2.29
SUB1P1-201ENST00000524415 NBASA2RRP1 2371 aa0.75□□□□□ -2.29
SUB1P1-201ENST00000524415 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
SUB1P1-201ENST00000524415 TRANK1O15050 2925 aa0.74□□□□□ -2.29
SUB1P1-201ENST00000524415 CEP290O15078 2479 aa0.73□□□□□ -2.29
SUB1P1-201ENST00000524415 PTPN13Q12923 2485 aa0.73□□□□□ -2.29
SUB1P1-201ENST00000524415 ZZEF1O43149 2961 aa0.73□□□□□ -2.29
SUB1P1-201ENST00000524415 ABCA12Q86UK0 2595 aa0.73□□□□□ -2.29
SUB1P1-201ENST00000524415 TTC28Q96AY4 2481 aa0.73□□□□□ -2.29
SUB1P1-201ENST00000524415 SRRM2Q9UQ35 2752 aaKnown RBP0.73□□□□□ -2.29
SUB1P1-201ENST00000524415 HIVEP3Q5T1R4 2406 aa0.73□□□□□ -2.29
SUB1P1-201ENST00000524415 PRUNE2Q8WUY3 3088 aa0.71□□□□□ -2.3
SUB1P1-201ENST00000524415 CRYBG3Q68DQ2 2970 aa0.71□□□□□ -2.3
SUB1P1-201ENST00000524415 SETD2Q9BYW2 2564 aaPredicted RBP0.7□□□□□ -2.3
SUB1P1-201ENST00000524415 CFAP54Q96N23 3096 aa0.7□□□□□ -2.3
SUB1P1-201ENST00000524415 RANBP2P49792 3224 aaKnown RBP0.7□□□□□ -2.3
SUB1P1-201ENST00000524415 FRYLO94915 3013 aa0.7□□□□□ -2.3
SUB1P1-201ENST00000524415 ZFHX4Q86UP3 3567 aa0.7□□□□□ -2.3
SUB1P1-201ENST00000524415 ITPR1Q14643 2758 aa0.69□□□□□ -2.3
SUB1P1-201ENST00000524415 TENM4Q6N022 2769 aa0.69□□□□□ -2.3
SUB1P1-201ENST00000524415 SMR3BP02814 79 aaPredicted RBP0.69□□□□□ -2.3
SUB1P1-201ENST00000524415 PRM1P04553 51 aa0.69□□□□□ -2.3
SUB1P1-201ENST00000524415 BOD1L1Q8NFC6 3051 aa0.69□□□□□ -2.3
SUB1P1-201ENST00000524415 NBEAQ8NFP9 2946 aa0.68□□□□□ -2.3
SUB1P1-201ENST00000524415 CREBBPQ92793 2442 aa0.68□□□□□ -2.3
SUB1P1-201ENST00000524415 DMXL1Q9Y485 3027 aa0.68□□□□□ -2.3
SUB1P1-201ENST00000524415 WDFY4Q6ZS81 3184 aa0.68□□□□□ -2.3
SUB1P1-201ENST00000524415 TENM3Q9P273 2699 aa0.68□□□□□ -2.3
SUB1P1-201ENST00000524415 AKAP13Q12802 2813 aa0.68□□□□□ -2.3
SUB1P1-201ENST00000524415 CFAP47Q6ZTR5 3102 aa0.68□□□□□ -2.3
SUB1P1-201ENST00000524415 KRTAP19-3Q7Z4W3 81 aa0.68□□□□□ -2.3
SUB1P1-201ENST00000524415 MYCBP2O75592 4640 aa0.68□□□□□ -2.3
SUB1P1-201ENST00000524415 COL7A1Q02388 2944 aa0.68□□□□□ -2.3
SUB1P1-201ENST00000524415 SONP18583 2426 aaKnown RBP0.67□□□□□ -2.3
SUB1P1-201ENST00000524415 SRCAPQ6ZRS2 3230 aa0.67□□□□□ -2.3
SUB1P1-201ENST00000524415 ANKHD1Q8IWZ3 2542 aaKnown RBP0.67□□□□□ -2.3
SUB1P1-201ENST00000524415 PIEZO1Q92508 2521 aa0.67□□□□□ -2.3
SUB1P1-201ENST00000524415 SZT2Q5T011 3432 aa0.67□□□□□ -2.3
SUB1P1-201ENST00000524415 NBPF19A0A087WUL8 3843 aa0.67□□□□□ -2.3
SUB1P1-201ENST00000524415 AKAP9Q99996 3911 aa0.67□□□□□ -2.3
SUB1P1-201ENST00000524415 SPG11Q96JI7 2443 aa0.67□□□□□ -2.3
SUB1P1-201ENST00000524415 C5orf42Q9H799 3197 aa0.67□□□□□ -2.3
SUB1P1-201ENST00000524415 HECTD1Q9ULT8 2610 aa0.67□□□□□ -2.3
SUB1P1-201ENST00000524415 VPS13AQ96RL7 3174 aa0.66□□□□□ -2.3
SUB1P1-201ENST00000524415 MAP1AP78559 2803 aaPredicted RBP0.66□□□□□ -2.3
SUB1P1-201ENST00000524415 NOTCH1P46531 2555 aa0.66□□□□□ -2.3
SUB1P1-201ENST00000524415 TRIOO75962 3097 aa0.66□□□□□ -2.3
SUB1P1-201ENST00000524415 ZNF292O60281 2723 aa0.66□□□□□ -2.3
SUB1P1-201ENST00000524415 FAM186AA6NE01 2351 aa0.65□□□□□ -2.3
SUB1P1-201ENST00000524415 SPEGQ15772 3267 aa0.65□□□□□ -2.3
SUB1P1-201ENST00000524415 STAB1Q9NY15 2570 aa0.65□□□□□ -2.3
SUB1P1-201ENST00000524415 RELNP78509 3460 aa0.65□□□□□ -2.3
SUB1P1-201ENST00000524415 CACNA1AO00555 2505 aa0.65□□□□□ -2.31
SUB1P1-201ENST00000524415 COL12A1Q99715 3063 aa0.65□□□□□ -2.31
SUB1P1-201ENST00000524415 KRTAP19-5Q3LI72 72 aa0.65□□□□□ -2.31
SUB1P1-201ENST00000524415 FRYQ5TBA9 3013 aa0.65□□□□□ -2.31
SUB1P1-201ENST00000524415 CHD9Q3L8U1 2897 aa0.65□□□□□ -2.31
SUB1P1-201ENST00000524415 LRRK2Q5S007 2527 aa0.65□□□□□ -2.31
SUB1P1-201ENST00000524415 NCOR2Q9Y618 2525 aa0.65□□□□□ -2.31
SUB1P1-201ENST00000524415 MKI67P46013 3256 aaKnown RBP0.65□□□□□ -2.31
SUB1P1-201ENST00000524415 DCHS1Q96JQ0 3298 aa0.65□□□□□ -2.31
SUB1P1-201ENST00000524415 HTTP42858 3142 aa0.64□□□□□ -2.31
SUB1P1-201ENST00000524415 RIF1Q5UIP0 2472 aaKnown RBP0.64□□□□□ -2.31
SUB1P1-201ENST00000524415 ITPR3Q14573 2671 aa0.64□□□□□ -2.31
SUB1P1-201ENST00000524415 DNAH11Q96DT5 4516 aa0.64□□□□□ -2.31
SUB1P1-201ENST00000524415 MT1AP04731 61 aa0.64□□□□□ -2.31
SUB1P1-201ENST00000524415 GOLGB1Q14789 3259 aaKnown RBP0.64□□□□□ -2.31
SUB1P1-201ENST00000524415 DCHS2Q6V1P9 2916 aa0.64□□□□□ -2.31
SUB1P1-201ENST00000524415 ACANP16112 2415 aa0.64□□□□□ -2.31
SUB1P1-201ENST00000524415 CELSR3Q9NYQ7 3312 aa0.63□□□□□ -2.31
SUB1P1-201ENST00000524415 ATMQ13315 3056 aa0.63□□□□□ -2.31
SUB1P1-201ENST00000524415 NF1P21359 2839 aa0.62□□□□□ -2.31
SUB1P1-201ENST00000524415 LRBAP50851 2863 aa0.62□□□□□ -2.31
SUB1P1-201ENST00000524415 TGP01266 2768 aa0.62□□□□□ -2.31
SUB1P1-201ENST00000524415 PDZD2O15018 2839 aa0.62□□□□□ -2.31
SUB1P1-201ENST00000524415 DNAH12Q6ZR08 3092 aa0.62□□□□□ -2.31
SUB1P1-201ENST00000524415 USP24Q9UPU5 2620 aa0.62□□□□□ -2.31
SUB1P1-201ENST00000524415 SETXQ7Z333 2677 aaKnown RBP0.61□□□□□ -2.31
SUB1P1-201ENST00000524415 POLQO75417 2590 aa0.61□□□□□ -2.31
SUB1P1-201ENST00000524415 NIPBLQ6KC79 2804 aaeCLIP0.61□□□□□ -2.31
SUB1P1-201ENST00000524415 USP9YO00507 2555 aaPredicted RBP0.61□□□□□ -2.31
SUB1P1-201ENST00000524415 EPG5Q9HCE0 2579 aa0.61□□□□□ -2.31
SUB1P1-201ENST00000524415 KALRNO60229 2985 aa0.6□□□□□ -2.31
SUB1P1-201ENST00000524415 DNAH8Q96JB1 4490 aa0.6□□□□□ -2.31
SUB1P1-201ENST00000524415 UTRNP46939 3433 aa0.6□□□□□ -2.31
SUB1P1-201ENST00000524415 KMT2AQ03164 3969 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms