RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 TRBV7-4A0A0J9YYF1 115 aa7.01□□□□□ -1.29
VEGFA-225ENST00000523950 CCDC179H3BU77 68 aa7.01□□□□□ -1.29
VEGFA-225ENST00000523950 CXCL6P80162 114 aa7.01□□□□□ -1.29
VEGFA-225ENST00000523950 SMIM20Q8N5G0 67 aa7.01□□□□□ -1.29
VEGFA-225ENST00000523950 ASB16-AS1Q495Z4 193 aa7□□□□□ -1.29
VEGFA-225ENST00000523950 SERP2Q8N6R1 65 aa6.99□□□□□ -1.29
VEGFA-225ENST00000523950 IGKV3D-7A0A0C4DH55 119 aa6.97□□□□□ -1.29
VEGFA-225ENST00000523950 C1orf195Q5TG92 126 aa6.97□□□□□ -1.29
VEGFA-225ENST00000523950 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
VEGFA-225ENST00000523950 KRTAP3-2Q9BYR7 98 aa6.97□□□□□ -1.29
VEGFA-225ENST00000523950 SS18L2Q9UHA2 77 aa6.96□□□□□ -1.3
VEGFA-225ENST00000523950 Q6ZVQ6 151 aa6.94□□□□□ -1.3
VEGFA-225ENST00000523950 RNF213Q63HN8 5207 aa6.94□□□□□ -1.3
VEGFA-225ENST00000523950 XP32Q5T750 250 aa6.92□□□□□ -1.3
VEGFA-225ENST00000523950 MUC17Q685J3 4493 aa6.92□□□□□ -1.3
VEGFA-225ENST00000523950 SEC61BP60468 96 aaKnown RBP6.9□□□□□ -1.3
VEGFA-225ENST00000523950 TMEM258P61165 79 aa6.89□□□□□ -1.31
VEGFA-225ENST00000523950 TRAV7A0A075B6U4 112 aa6.88□□□□□ -1.31
VEGFA-225ENST00000523950 A0A087WSZ3 146 aa6.88□□□□□ -1.31
VEGFA-225ENST00000523950 A0A1W2PNM2 257 aa6.88□□□□□ -1.31
VEGFA-225ENST00000523950 A0A087WVE0 104 aa6.87□□□□□ -1.31
VEGFA-225ENST00000523950 C9orf92A6NGG3 77 aa6.87□□□□□ -1.31
VEGFA-225ENST00000523950 RPS28P62857 69 aaKnown RBP6.87□□□□□ -1.31
VEGFA-225ENST00000523950 A0A0U1RQV1 116 aa6.86□□□□□ -1.31
VEGFA-225ENST00000523950 NREPQ16612 68 aa6.85□□□□□ -1.31
VEGFA-225ENST00000523950 NDUFC1O43677 76 aa6.82□□□□□ -1.32
VEGFA-225ENST00000523950 J3KT08 172 aa6.81□□□□□ -1.32
VEGFA-225ENST00000523950 Q96NJ1 140 aa6.81□□□□□ -1.32
VEGFA-225ENST00000523950 BPY2O14599 106 aa6.8□□□□□ -1.32
VEGFA-225ENST00000523950 KLKP1Q107X0 134 aa6.8□□□□□ -1.32
VEGFA-225ENST00000523950 RPL37P61927 97 aaKnown RBP6.79□□□□□ -1.32
VEGFA-225ENST00000523950 MUC2Q02817 5179 aa6.78□□□□□ -1.32
VEGFA-225ENST00000523950 ATP5EP56381 51 aaPredicted RBP6.77□□□□□ -1.33
VEGFA-225ENST00000523950 LINC00472Q9H8W2 130 aa6.76□□□□□ -1.33
VEGFA-225ENST00000523950 IGKV4-1P06312 121 aa6.75□□□□□ -1.33
VEGFA-225ENST00000523950 PCOTHQ58A44 107 aa6.75□□□□□ -1.33
VEGFA-225ENST00000523950 Q75L30 129 aa6.74□□□□□ -1.33
VEGFA-225ENST00000523950 C20orf197Q8N268 126 aa6.73□□□□□ -1.33
VEGFA-225ENST00000523950 KRTAP4-1Q9BYQ7 146 aa6.72□□□□□ -1.33
VEGFA-225ENST00000523950 FAM236DA0A1B0GTK5 79 aa6.7□□□□□ -1.34
VEGFA-225ENST00000523950 FAM236CP0DP71 79 aa6.7□□□□□ -1.34
VEGFA-225ENST00000523950 C20orf166-AS1Q96NR2 134 aa6.7□□□□□ -1.34
VEGFA-225ENST00000523950 H7BZZ5 65 aa6.69□□□□□ -1.34
VEGFA-225ENST00000523950 LINC00313P59037 77 aa6.69□□□□□ -1.34
VEGFA-225ENST00000523950 OCR1Q9BZK8 76 aa6.69□□□□□ -1.34
VEGFA-225ENST00000523950 A8MUU9 505 aa6.68□□□□□ -1.34
VEGFA-225ENST00000523950 DSCR10P59022 87 aa6.68□□□□□ -1.34
VEGFA-225ENST00000523950 DEFB116Q30KQ4 102 aa6.68□□□□□ -1.34
VEGFA-225ENST00000523950 ATP11AUNQ6ZP68 121 aa6.68□□□□□ -1.34
VEGFA-225ENST00000523950 C8orf87E5RJ46 101 aa6.67□□□□□ -1.34
VEGFA-225ENST00000523950 TMEM254Q8TBM7 123 aa6.67□□□□□ -1.34
VEGFA-225ENST00000523950 CYSTM1Q9H1C7 97 aa6.67□□□□□ -1.34
VEGFA-225ENST00000523950 SERP1Q9Y6X1 66 aa6.67□□□□□ -1.34
VEGFA-225ENST00000523950 A0A1B0GVX0 72 aa6.66□□□□□ -1.34
VEGFA-225ENST00000523950 SVIPQ8NHG7 77 aa6.66□□□□□ -1.34
VEGFA-225ENST00000523950 IGHV6-1A0A0B4J1U7 121 aa6.64□□□□□ -1.35
VEGFA-225ENST00000523950 NDUFB1O75438 58 aa6.64□□□□□ -1.35
VEGFA-225ENST00000523950 KRTAP16-1A8MUX0 517 aa6.63□□□□□ -1.35
VEGFA-225ENST00000523950 C5orf47Q569G3 176 aa6.63□□□□□ -1.35
VEGFA-225ENST00000523950 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
VEGFA-225ENST00000523950 HCG22E2RYF7 251 aa6.62□□□□□ -1.35
VEGFA-225ENST00000523950 LCE2AQ5TA79 106 aaPredicted RBP6.62□□□□□ -1.35
VEGFA-225ENST00000523950 A8MWP4 228 aa6.61□□□□□ -1.35
VEGFA-225ENST00000523950 Q8N9L7 120 aa6.61□□□□□ -1.35
VEGFA-225ENST00000523950 NOTCH2NLQ7Z3S9 236 aa6.6□□□□□ -1.35
VEGFA-225ENST00000523950 H3BPC8 53 aa6.59□□□□□ -1.35
VEGFA-225ENST00000523950 K7EQZ3 153 aa6.58□□□□□ -1.36
VEGFA-225ENST00000523950 SNURFQ9Y675 71 aa6.58□□□□□ -1.36
VEGFA-225ENST00000523950 SMIM26A0A096LP01 95 aa6.56□□□□□ -1.36
VEGFA-225ENST00000523950 KRTAP19-2Q3LHN2 52 aa6.55□□□□□ -1.36
VEGFA-225ENST00000523950 PRR15Q8IV56 129 aa6.55□□□□□ -1.36
VEGFA-225ENST00000523950 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
VEGFA-225ENST00000523950 MP68P56378 58 aa6.54□□□□□ -1.36
VEGFA-225ENST00000523950 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
VEGFA-225ENST00000523950 ZCCHC13Q8WW36 166 aaKnown RBP6.53□□□□□ -1.36
VEGFA-225ENST00000523950 Q8N9P0 234 aaPredicted RBP6.52□□□□□ -1.37
VEGFA-225ENST00000523950 CASC2Q6XLA1 102 aa6.5□□□□□ -1.37
VEGFA-225ENST00000523950 hDV103S1A0JD37 113 aa6.49□□□□□ -1.37
VEGFA-225ENST00000523950 COX6B2Q6YFQ2 88 aa6.49□□□□□ -1.37
VEGFA-225ENST00000523950 TP53AIP1Q9HCN2 124 aa6.49□□□□□ -1.37
VEGFA-225ENST00000523950 MMP24-AS1A0A0U1RRL7 71 aa6.48□□□□□ -1.37
VEGFA-225ENST00000523950 CYP4F30PQ9H0H9 118 aa6.48□□□□□ -1.37
VEGFA-225ENST00000523950 MRPL34Q9BQ48 92 aaKnown RBP6.47□□□□□ -1.37
VEGFA-225ENST00000523950 SPANXA2-OT1Q8N9U9 137 aa6.46□□□□□ -1.38
VEGFA-225ENST00000523950 MT1HP80294 61 aa6.45□□□□□ -1.38
VEGFA-225ENST00000523950 WFDC13Q8IUB5 93 aa6.45□□□□□ -1.38
VEGFA-225ENST00000523950 TRAV22A0A0B4J277 110 aa6.42□□□□□ -1.38
VEGFA-225ENST00000523950 H0Y9P7 68 aa6.41□□□□□ -1.38
VEGFA-225ENST00000523950 HRES1P13985 223 aa6.39□□□□□ -1.39
VEGFA-225ENST00000523950 RBM12B-AS1Q9P1G2 102 aa6.39□□□□□ -1.39
VEGFA-225ENST00000523950 NDUFS5O43920 106 aa6.38□□□□□ -1.39
VEGFA-225ENST00000523950 SPINK7P58062 85 aa6.38□□□□□ -1.39
VEGFA-225ENST00000523950 MPLKIPQ8TAP9 179 aa6.38□□□□□ -1.39
VEGFA-225ENST00000523950 LINC00208Q96KT6 92 aa6.38□□□□□ -1.39
VEGFA-225ENST00000523950 V9GYY9 64 aa6.38□□□□□ -1.39
VEGFA-225ENST00000523950 M0R2T5 61 aa6.36□□□□□ -1.39
VEGFA-225ENST00000523950 FLGP20930 4061 aaPredicted RBP6.36□□□□□ -1.39
VEGFA-225ENST00000523950 C4orf26Q17RF5 130 aa6.35□□□□□ -1.39
VEGFA-225ENST00000523950 C1orf64Q8NEQ6 169 aa6.35□□□□□ -1.39
VEGFA-225ENST00000523950 Q1T7F1 81 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms