RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 C8orf17Q9NRJ1 99 aa5.11□□□□□ -1.59
CSMD1-213ENST00000523488 CSAG1Q6PB30 78 aa5.11□□□□□ -1.59
CSMD1-213ENST00000523488 MIR22HGQ0VDD5 57 aa5.1□□□□□ -1.59
CSMD1-213ENST00000523488 DNAH10Q8IVF4 4471 aa5.1□□□□□ -1.59
CSMD1-213ENST00000523488 UQCR11O14957 56 aa5.09□□□□□ -1.59
CSMD1-213ENST00000523488 HECTD4Q9Y4D8 3996 aa5.09□□□□□ -1.6
CSMD1-213ENST00000523488 IGLV9-49A0A0B4J1Y8 123 aa5.08□□□□□ -1.6
CSMD1-213ENST00000523488 CASC10Q5T4H9 136 aa5.08□□□□□ -1.6
CSMD1-213ENST00000523488 MRPL34Q9BQ48 92 aaKnown RBP5.08□□□□□ -1.6
CSMD1-213ENST00000523488 LINC00483Q53H64 154 aa5.07□□□□□ -1.6
CSMD1-213ENST00000523488 ZNF706Q9Y5V0 76 aaPredicted RBP5.06□□□□□ -1.6
CSMD1-213ENST00000523488 CHTF8P0CG12 524 aa5.05□□□□□ -1.6
CSMD1-213ENST00000523488 A0A1B0GVX0 72 aa5.05□□□□□ -1.6
CSMD1-213ENST00000523488 KRTAP10-11P60412 298 aa5.04□□□□□ -1.6
CSMD1-213ENST00000523488 CSMD3Q7Z407 3707 aa5.04□□□□□ -1.6
CSMD1-213ENST00000523488 C1orf134Q5TEV5 83 aa5.03□□□□□ -1.6
CSMD1-213ENST00000523488 DMAC1Q96GE9 116 aa5.03□□□□□ -1.6
CSMD1-213ENST00000523488 SPINK6Q6UWN8 80 aa5.03□□□□□ -1.6
CSMD1-213ENST00000523488 TENM3Q9P273 2699 aa5.03□□□□□ -1.6
CSMD1-213ENST00000523488 PKD1L1Q8TDX9 2849 aa5.02□□□□□ -1.61
CSMD1-213ENST00000523488 K7EIL1 84 aa5.01□□□□□ -1.61
CSMD1-213ENST00000523488 HUWE1Q7Z6Z7 4374 aaKnown RBP5.01□□□□□ -1.61
CSMD1-213ENST00000523488 LY6G6CO95867 125 aa4.98□□□□□ -1.61
CSMD1-213ENST00000523488 Q5W150 140 aa4.96□□□□□ -1.62
CSMD1-213ENST00000523488 NOTCH2NLQ7Z3S9 236 aa4.95□□□□□ -1.62
CSMD1-213ENST00000523488 KRTAP11-1Q8IUC1 163 aa4.95□□□□□ -1.62
CSMD1-213ENST00000523488 SRRM2Q9UQ35 2752 aaKnown RBP4.94□□□□□ -1.62
CSMD1-213ENST00000523488 ZNF861PO60384 105 aa4.93□□□□□ -1.62
CSMD1-213ENST00000523488 SPINK1P00995 79 aa4.93□□□□□ -1.62
CSMD1-213ENST00000523488 C14orf177Q52M58 125 aa4.92□□□□□ -1.62
CSMD1-213ENST00000523488 FAM229AH3BQW9 127 aa4.9□□□□□ -1.63
CSMD1-213ENST00000523488 ROMO1P60602 79 aa4.9□□□□□ -1.63
CSMD1-213ENST00000523488 IGKV2D-30A0A075B6S6 120 aa4.88□□□□□ -1.63
CSMD1-213ENST00000523488 IGKV2-30P06310 120 aa4.88□□□□□ -1.63
CSMD1-213ENST00000523488 DNAH2Q9P225 4427 aa4.88□□□□□ -1.63
CSMD1-213ENST00000523488 ANAPC11Q9NYG5 84 aa4.87□□□□□ -1.63
CSMD1-213ENST00000523488 TGP01266 2768 aa4.87□□□□□ -1.63
CSMD1-213ENST00000523488 FLG2Q5D862 2391 aaPredicted RBP4.87□□□□□ -1.63
CSMD1-213ENST00000523488 KRTAP25-1Q3LHN0 102 aa4.87□□□□□ -1.63
CSMD1-213ENST00000523488 CIRBP-AS1Q8TBR5 109 aa4.87□□□□□ -1.63
CSMD1-213ENST00000523488 IGLV7-43P04211 117 aa4.86□□□□□ -1.63
CSMD1-213ENST00000523488 WWC2-AS2Q96NR7 200 aa4.86□□□□□ -1.63
CSMD1-213ENST00000523488 SACSQ9NZJ4 4579 aa4.85□□□□□ -1.63
CSMD1-213ENST00000523488 A8MUU9 505 aa4.85□□□□□ -1.63
CSMD1-213ENST00000523488 KRTAP16-1A8MUX0 517 aa4.85□□□□□ -1.63
CSMD1-213ENST00000523488 K7ERS5 55 aa4.84□□□□□ -1.64
CSMD1-213ENST00000523488 SSBP3-AS1Q7Z2R9 100 aa4.82□□□□□ -1.64
CSMD1-213ENST00000523488 CRIPTQ9P021 101 aa4.82□□□□□ -1.64
CSMD1-213ENST00000523488 NUPR2A6NF83 97 aa4.81□□□□□ -1.64
CSMD1-213ENST00000523488 PKHD1L1Q86WI1 4243 aa4.81□□□□□ -1.64
CSMD1-213ENST00000523488 IGLV5-52A0A0A0MRZ9 124 aa4.8□□□□□ -1.64
CSMD1-213ENST00000523488 SPINT4Q6UDR6 99 aa4.79□□□□□ -1.64
CSMD1-213ENST00000523488 KRTAP1-5Q9BYS1 174 aa4.78□□□□□ -1.64
CSMD1-213ENST00000523488 NBDYA0A0U1RRE5 68 aa4.77□□□□□ -1.65
CSMD1-213ENST00000523488 LINC00304Q8N9R0 145 aa4.77□□□□□ -1.65
CSMD1-213ENST00000523488 PANO1I0J062 215 aa4.77□□□□□ -1.65
CSMD1-213ENST00000523488 SPACA4Q8TDM5 124 aa4.76□□□□□ -1.65
CSMD1-213ENST00000523488 KMT2AQ03164 3969 aa4.76□□□□□ -1.65
CSMD1-213ENST00000523488 PKHD1P08F94 4074 aa4.76□□□□□ -1.65
CSMD1-213ENST00000523488 DNAH11Q96DT5 4516 aa4.76□□□□□ -1.65
CSMD1-213ENST00000523488 Q8N1X5 172 aa4.76□□□□□ -1.65
CSMD1-213ENST00000523488 Q6ZRN7 208 aaPredicted RBP4.75□□□□□ -1.65
CSMD1-213ENST00000523488 PSORS1C2Q9UIG4 136 aa4.75□□□□□ -1.65
CSMD1-213ENST00000523488 A0A1B0GU33 70 aa4.74□□□□□ -1.65
CSMD1-213ENST00000523488 PLECQ15149 4684 aaKnown RBP4.74□□□□□ -1.65
CSMD1-213ENST00000523488 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.74□□□□□ -1.65
CSMD1-213ENST00000523488 DMBT1Q9UGM3 2413 aaPredicted RBP4.72□□□□□ -1.65
CSMD1-213ENST00000523488 Q6ZSA8 131 aa4.72□□□□□ -1.65
CSMD1-213ENST00000523488 COL7A1Q02388 2944 aa4.71□□□□□ -1.65
CSMD1-213ENST00000523488 H0YAA0 97 aa4.71□□□□□ -1.65
CSMD1-213ENST00000523488 DNAH5Q8TE73 4624 aa4.71□□□□□ -1.66
CSMD1-213ENST00000523488 PKD1P98161 4303 aa4.7□□□□□ -1.66
CSMD1-213ENST00000523488 APLNQ9ULZ1 77 aa4.7□□□□□ -1.66
CSMD1-213ENST00000523488 FBN3Q75N90 2809 aa4.69□□□□□ -1.66
CSMD1-213ENST00000523488 P0C880 135 aa4.69□□□□□ -1.66
CSMD1-213ENST00000523488 SMR3BP02814 79 aaPredicted RBP4.67□□□□□ -1.66
CSMD1-213ENST00000523488 H1FX-AS1Q4G0G2 97 aa4.66□□□□□ -1.66
CSMD1-213ENST00000523488 A0A087WTM6 91 aa4.66□□□□□ -1.66
CSMD1-213ENST00000523488 NDUFAF8A1L188 74 aa4.66□□□□□ -1.66
CSMD1-213ENST00000523488 TYMSOSQ8TAI1 123 aa4.64□□□□□ -1.67
CSMD1-213ENST00000523488 TNXBP22105 4242 aa4.63□□□□□ -1.67
CSMD1-213ENST00000523488 VPS13BQ7Z7G8 4022 aa4.62□□□□□ -1.67
CSMD1-213ENST00000523488 HSPG2P98160 4391 aa4.62□□□□□ -1.67
CSMD1-213ENST00000523488 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
CSMD1-213ENST00000523488 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
CSMD1-213ENST00000523488 C20orf166-AS1Q96NR2 134 aa4.6□□□□□ -1.67
CSMD1-213ENST00000523488 FAT2Q9NYQ8 4349 aa4.6□□□□□ -1.67
CSMD1-213ENST00000523488 STARD9Q9P2P6 4700 aa4.58□□□□□ -1.68
CSMD1-213ENST00000523488 RPS29P62273 56 aaKnown RBP4.57□□□□□ -1.68
CSMD1-213ENST00000523488 A0A0D9SG42 100 aa4.56□□□□□ -1.68
CSMD1-213ENST00000523488 MEGF8Q7Z7M0 2845 aa4.56□□□□□ -1.68
CSMD1-213ENST00000523488 MYCBP2O75592 4640 aa4.55□□□□□ -1.68
CSMD1-213ENST00000523488 KRTAP3-1Q9BYR8 98 aa4.55□□□□□ -1.68
CSMD1-213ENST00000523488 RPL37P61927 97 aaKnown RBP4.55□□□□□ -1.68
CSMD1-213ENST00000523488 APOBP04114 4563 aaKnown RBP4.54□□□□□ -1.68
CSMD1-213ENST00000523488 COX6B2Q6YFQ2 88 aa4.53□□□□□ -1.68
CSMD1-213ENST00000523488 KRTAP10-2P60368 255 aa4.52□□□□□ -1.69
CSMD1-213ENST00000523488 KRTAP13-2Q52LG2 175 aa4.52□□□□□ -1.69
CSMD1-213ENST00000523488 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
CSMD1-213ENST00000523488 TPRXLQ17RH7 258 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms