RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 Q5W150 140 aa5.4□□□□□ -1.55
CSMD1-212ENST00000523387 SPACA4Q8TDM5 124 aa5.39□□□□□ -1.55
CSMD1-212ENST00000523387 NBPF19A0A087WUL8 3843 aa5.38□□□□□ -1.55
CSMD1-212ENST00000523387 ADM2Q7Z4H4 148 aa5.38□□□□□ -1.55
CSMD1-212ENST00000523387 SRRM2Q9UQ35 2752 aaKnown RBP5.37□□□□□ -1.55
CSMD1-212ENST00000523387 A0A087WTM6 91 aa5.37□□□□□ -1.55
CSMD1-212ENST00000523387 SSBP3-AS1Q7Z2R9 100 aa5.35□□□□□ -1.55
CSMD1-212ENST00000523387 TENM4Q6N022 2769 aa5.35□□□□□ -1.55
CSMD1-212ENST00000523387 K7ERS5 55 aa5.35□□□□□ -1.55
CSMD1-212ENST00000523387 DMAC1Q96GE9 116 aa5.35□□□□□ -1.55
CSMD1-212ENST00000523387 OTOGQ6ZRI0 2925 aa5.35□□□□□ -1.55
CSMD1-212ENST00000523387 LINC00483Q53H64 154 aa5.34□□□□□ -1.55
CSMD1-212ENST00000523387 IGLV7-43P04211 117 aa5.34□□□□□ -1.55
CSMD1-212ENST00000523387 KRTAP13-1Q8IUC0 172 aa5.34□□□□□ -1.56
CSMD1-212ENST00000523387 PLAC8Q9NZF1 115 aa5.33□□□□□ -1.56
CSMD1-212ENST00000523387 ZNF469Q96JG9 3925 aaPredicted RBP5.33□□□□□ -1.56
CSMD1-212ENST00000523387 CSAG1Q6PB30 78 aa5.33□□□□□ -1.56
CSMD1-212ENST00000523387 KMT2BQ9UMN6 2715 aaPredicted RBP5.33□□□□□ -1.56
CSMD1-212ENST00000523387 C1orf134Q5TEV5 83 aa5.33□□□□□ -1.56
CSMD1-212ENST00000523387 FBN1P35555 2871 aaKnown RBP5.33□□□□□ -1.56
CSMD1-212ENST00000523387 LY6G6CO95867 125 aa5.32□□□□□ -1.56
CSMD1-212ENST00000523387 AKAP9Q99996 3911 aa5.32□□□□□ -1.56
CSMD1-212ENST00000523387 ASB16-AS1Q495Z4 193 aa5.32□□□□□ -1.56
CSMD1-212ENST00000523387 H3BS24 57 aa5.31□□□□□ -1.56
CSMD1-212ENST00000523387 PLA2G1BP04054 148 aaKnown RBP5.31□□□□□ -1.56
CSMD1-212ENST00000523387 Q8N1X5 172 aa5.31□□□□□ -1.56
CSMD1-212ENST00000523387 TRRAPQ9Y4A5 3859 aa5.3□□□□□ -1.56
CSMD1-212ENST00000523387 SPATA8Q6RVD6 105 aa5.3□□□□□ -1.56
CSMD1-212ENST00000523387 ANK3Q12955 4377 aaKnown RBP5.27□□□□□ -1.57
CSMD1-212ENST00000523387 TYMSOSQ8TAI1 123 aa5.23□□□□□ -1.57
CSMD1-212ENST00000523387 Q6ZRN7 208 aaPredicted RBP5.22□□□□□ -1.57
CSMD1-212ENST00000523387 TENM2Q9NT68 2774 aa5.22□□□□□ -1.57
CSMD1-212ENST00000523387 FLG2Q5D862 2391 aaPredicted RBP5.21□□□□□ -1.58
CSMD1-212ENST00000523387 A0A1B0GU33 70 aa5.17□□□□□ -1.58
CSMD1-212ENST00000523387 DMBT1Q9UGM3 2413 aaPredicted RBP5.16□□□□□ -1.58
CSMD1-212ENST00000523387 COL7A1Q02388 2944 aa5.16□□□□□ -1.58
CSMD1-212ENST00000523387 KRTAP13-3Q3SY46 172 aa5.15□□□□□ -1.58
CSMD1-212ENST00000523387 CRIPTQ9P021 101 aa5.15□□□□□ -1.59
CSMD1-212ENST00000523387 TGP01266 2768 aa5.15□□□□□ -1.59
CSMD1-212ENST00000523387 C9orf92A6NGG3 77 aa5.14□□□□□ -1.59
CSMD1-212ENST00000523387 SPINT4Q6UDR6 99 aa5.12□□□□□ -1.59
CSMD1-212ENST00000523387 LINC00304Q8N9R0 145 aa5.12□□□□□ -1.59
CSMD1-212ENST00000523387 KRTAP13-2Q52LG2 175 aa5.1□□□□□ -1.59
CSMD1-212ENST00000523387 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
CSMD1-212ENST00000523387 KRTAP10-2P60368 255 aa5.07□□□□□ -1.6
CSMD1-212ENST00000523387 A0A0D9SG42 100 aa5.06□□□□□ -1.6
CSMD1-212ENST00000523387 CSMD3Q7Z407 3707 aa5.06□□□□□ -1.6
CSMD1-212ENST00000523387 H1FX-AS1Q4G0G2 97 aa5.06□□□□□ -1.6
CSMD1-212ENST00000523387 Q6ZSA8 131 aa5.03□□□□□ -1.6
CSMD1-212ENST00000523387 KRTAP16-1A8MUX0 517 aa5.03□□□□□ -1.6
CSMD1-212ENST00000523387 KRTAP10-1P60331 282 aa5.02□□□□□ -1.61
CSMD1-212ENST00000523387 FBN3Q75N90 2809 aa5.01□□□□□ -1.61
CSMD1-212ENST00000523387 H0YAA0 97 aa5.01□□□□□ -1.61
CSMD1-212ENST00000523387 ROMO1P60602 79 aa5.01□□□□□ -1.61
CSMD1-212ENST00000523387 SMR3BP02814 79 aaPredicted RBP5□□□□□ -1.61
CSMD1-212ENST00000523387 A8MUU9 505 aa5□□□□□ -1.61
CSMD1-212ENST00000523387 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
CSMD1-212ENST00000523387 KRTAP1-4P0C5Y4 121 aa4.92□□□□□ -1.62
CSMD1-212ENST00000523387 COX6B2Q6YFQ2 88 aa4.92□□□□□ -1.62
CSMD1-212ENST00000523387 MEGF8Q7Z7M0 2845 aa4.92□□□□□ -1.62
CSMD1-212ENST00000523387 DNAH10Q8IVF4 4471 aa4.91□□□□□ -1.62
CSMD1-212ENST00000523387 HUWE1Q7Z6Z7 4374 aaKnown RBP4.87□□□□□ -1.63
CSMD1-212ENST00000523387 C20orf166-AS1Q96NR2 134 aa4.84□□□□□ -1.64
CSMD1-212ENST00000523387 RPS29P62273 56 aaKnown RBP4.83□□□□□ -1.64
CSMD1-212ENST00000523387 S4R3F8 94 aa4.82□□□□□ -1.64
CSMD1-212ENST00000523387 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
CSMD1-212ENST00000523387 KRTAP21-3Q3LHN1 58 aa4.8□□□□□ -1.64
CSMD1-212ENST00000523387 C10orf95Q9H7T3 257 aa4.8□□□□□ -1.64
CSMD1-212ENST00000523387 ANK2Q01484 3957 aa4.78□□□□□ -1.64
CSMD1-212ENST00000523387 KRTAP3-1Q9BYR8 98 aa4.78□□□□□ -1.64
CSMD1-212ENST00000523387 DNAH9Q9NYC9 4486 aa4.72□□□□□ -1.65
CSMD1-212ENST00000523387 P0C880 135 aa4.72□□□□□ -1.65
CSMD1-212ENST00000523387 PLECQ15149 4684 aaKnown RBP4.71□□□□□ -1.66
CSMD1-212ENST00000523387 ALMS1Q8TCU4 4167 aa4.7□□□□□ -1.66
CSMD1-212ENST00000523387 DNAH1Q9P2D7 4330 aa4.7□□□□□ -1.66
CSMD1-212ENST00000523387 TPRXLQ17RH7 258 aa4.69□□□□□ -1.66
CSMD1-212ENST00000523387 LYSTQ99698 3801 aa4.69□□□□□ -1.66
CSMD1-212ENST00000523387 DNAH8Q96JB1 4490 aa4.68□□□□□ -1.66
CSMD1-212ENST00000523387 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
CSMD1-212ENST00000523387 KRTAP10-6P60371 365 aaPredicted RBP4.62□□□□□ -1.67
CSMD1-212ENST00000523387 M0QZ58 72 aa4.62□□□□□ -1.67
CSMD1-212ENST00000523387 FRAS1Q86XX4 4008 aa4.61□□□□□ -1.67
CSMD1-212ENST00000523387 R4GN34 69 aa4.61□□□□□ -1.67
CSMD1-212ENST00000523387 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
CSMD1-212ENST00000523387 DNAH3Q8TD57 4116 aa4.59□□□□□ -1.67
CSMD1-212ENST00000523387 KRTAP12-2P59991 146 aa4.59□□□□□ -1.67
CSMD1-212ENST00000523387 DNAH11Q96DT5 4516 aa4.58□□□□□ -1.68
CSMD1-212ENST00000523387 DNAH17Q9UFH2 4485 aa4.57□□□□□ -1.68
CSMD1-212ENST00000523387 STARD9Q9P2P6 4700 aa4.57□□□□□ -1.68
CSMD1-212ENST00000523387 CMYA5Q8N3K9 4069 aa4.57□□□□□ -1.68
CSMD1-212ENST00000523387 VPS13DQ5THJ4 4388 aa4.56□□□□□ -1.68
CSMD1-212ENST00000523387 DNAH7Q8WXX0 4024 aa4.55□□□□□ -1.68
CSMD1-212ENST00000523387 XP32Q5T750 250 aa4.55□□□□□ -1.68
CSMD1-212ENST00000523387 Q5VSD8 79 aa4.55□□□□□ -1.68
CSMD1-212ENST00000523387 CAMK2N1Q7Z7J9 78 aa4.53□□□□□ -1.68
CSMD1-212ENST00000523387 KRTAP10-8P60410 259 aa4.53□□□□□ -1.68
CSMD1-212ENST00000523387 KRTAP3-3Q9BYR6 98 aa4.53□□□□□ -1.68
CSMD1-212ENST00000523387 KRTAP3-2Q9BYR7 98 aa4.53□□□□□ -1.68
CSMD1-212ENST00000523387 KRTAP12-1P59990 96 aa4.52□□□□□ -1.69
CSMD1-212ENST00000523387 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms