RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 UBE2D1P51668 147 aa1.17□□□□□ -2.22
HMGB1P1-201ENST00000522557 FAM74A4Q5TZK3 123 aa1.17□□□□□ -2.22
HMGB1P1-201ENST00000522557 TOMM5Q8N4H5 51 aa1.17□□□□□ -2.22
HMGB1P1-201ENST00000522557 DSCR8Q96T75 97 aa1.17□□□□□ -2.22
HMGB1P1-201ENST00000522557 MGST2Q99735 147 aa1.17□□□□□ -2.22
HMGB1P1-201ENST00000522557 MRPL35Q9NZE8 188 aaKnown RBP1.17□□□□□ -2.22
HMGB1P1-201ENST00000522557 PKHD1L1Q86WI1 4243 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 TRBV25-1A0A075B6N4 114 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 TRBV10-1A0A0K0K1A3 114 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 UBE2L3P68036 154 aaKnown RBP1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 C9orf116Q5BN46 136 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 CLPSL2Q6UWE3 100 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 SMIM4Q8WVI0 70 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 IFI27L1Q96BM0 104 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 DMAC1Q96GE9 116 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 FAM167A-AS1Q96KT0 104 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 HMCN2Q8NDA2 5059 aa1.16□□□□□ -2.22
HMGB1P1-201ENST00000522557 UBE2L5PA0A1B0GUS4 154 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 NAP1L6A6NFF2 107 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 ARMS2P0C7Q2 107 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 UBE2D3P61077 147 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 UBE2D2P62837 147 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 ZNF56Q15929 161 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 COL5A1-AS1Q5SY13 56 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 Q8N8P6 123 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 AQP10Q96PS8 301 aa1.15□□□□□ -2.23
HMGB1P1-201ENST00000522557 A0A096LNI7 61 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 TRBV6-1A0A0K0K1D8 114 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 TRBV10-3A0A0K0K1G6 114 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 H3BVH4 76 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 CCKP06307 115 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 SPATA45Q537H7 98 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 C5orf38Q86SI9 138 aa1.14□□□□□ -2.23
HMGB1P1-201ENST00000522557 LRP2P98164 4655 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 TRAV13-2A0A0B4J235 113 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 HIGD1CA8MV81 97 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 MPC2O95563 127 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 MGPP08493 103 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 PDE6GP18545 87 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 TMEM167BQ9NRX6 74 aa1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 LRP1Q07954 4544 aaKnown RBP1.13□□□□□ -2.23
HMGB1P1-201ENST00000522557 GVQW2A0A096LPI5 108 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P1-201ENST00000522557 GCHFRP30047 84 aa1.12□□□□□ -2.23
HMGB1P1-201ENST00000522557 ATP5EP56381 51 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P1-201ENST00000522557 SNHG12Q9BXW3 62 aa1.12□□□□□ -2.23
HMGB1P1-201ENST00000522557 ARL2-SNX15V9GYD0 113 aa1.12□□□□□ -2.23
HMGB1P1-201ENST00000522557 LINC00959A0A1B0GUT2 108 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 LOC101927531A0A1B0GV80 90 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 HCG22E2RYF7 251 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 F2Z2F3 143 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 M0QY20 66 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 M0R2T5 61 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 SIX6O95475 246 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 CRIP1P50238 77 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 SERF2P84101 59 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 BAGE2Q86Y30 109 aa1.11□□□□□ -2.23
HMGB1P1-201ENST00000522557 DNAH8Q96JB1 4490 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 NDUFA1O15239 70 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 SPAG11AQ6PDA7 123 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 C20orf197Q8N268 126 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 VAMP8Q9BV40 100 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 TNXBP22105 4242 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 FAT3Q8TDW7 4589 aa1.1□□□□□ -2.23
HMGB1P1-201ENST00000522557 TEX49A0A1B0GTD5 131 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 CTXND1A0A1B0GTU2 59 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 I3L3M4 83 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 FCER1GP30273 86 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 SPAG11BQ08648 103 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 Q86TA4 180 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 PPP1R1CQ8WVI7 109 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 ST20Q9HBF5 79 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 CDC42SE2Q9NRR3 84 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 UBE2D4Q9Y2X8 147 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 V9GYH0 126 aa1.09□□□□□ -2.23
HMGB1P1-201ENST00000522557 FAT4Q6V0I7 4981 aa1.09□□□□□ -2.24
HMGB1P1-201ENST00000522557 BCE1O60756 84 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 PPP1R17O96001 155 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 MT-ATP8P03928 68 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 COX6B2Q6YFQ2 88 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 Q6ZQY7 126 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 C9orf62Q8N4C0 152 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 CYP4F30PQ9H0H9 118 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 LINC00846Q9NV44 126 aa1.08□□□□□ -2.24
HMGB1P1-201ENST00000522557 TRBV30A0A0K0K1B3 111 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 C7orf77A4D0Y5 90 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 KRTDAPP60985 99 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 FAM213BQ8TBF2 198 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 COX7B2Q8TF08 81 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 RPL39LQ96EH5 51 aaKnown RBP1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 LINC00208Q96KT6 92 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 PMCHL2Q9BQD1 86 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 MANBALQ9NQG1 85 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 TOMM7Q9P0U1 55 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 C6orf48Q9UBA6 75 aa1.07□□□□□ -2.24
HMGB1P1-201ENST00000522557 A0A1W2PPM0 123 aa1.06□□□□□ -2.24
HMGB1P1-201ENST00000522557 hADV29S1A0JD25 119 aa1.06□□□□□ -2.24
HMGB1P1-201ENST00000522557 NCR3O14931 201 aa1.06□□□□□ -2.24
HMGB1P1-201ENST00000522557 SPINK1P00995 79 aa1.06□□□□□ -2.24
HMGB1P1-201ENST00000522557 POLR2KP53803 58 aaKnown RBP1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms