RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 TMEM254Q8TBM7 123 aa12.93□□□□□ -0.34
PTP4A3-204ENST00000521578 H7BZZ5 65 aa12.93□□□□□ -0.34
PTP4A3-204ENST00000521578 SNURFQ9Y675 71 aa12.93□□□□□ -0.34
PTP4A3-204ENST00000521578 TNXBP22105 4242 aa12.92□□□□□ -0.34
PTP4A3-204ENST00000521578 J3QL48 77 aa12.91□□□□□ -0.34
PTP4A3-204ENST00000521578 MT1HL1P0DM35 61 aa12.91□□□□□ -0.34
PTP4A3-204ENST00000521578 NDUFC1O43677 76 aa12.9□□□□□ -0.34
PTP4A3-204ENST00000521578 KRTAP13-2Q52LG2 175 aa12.9□□□□□ -0.34
PTP4A3-204ENST00000521578 Q96NJ1 140 aa12.9□□□□□ -0.34
PTP4A3-204ENST00000521578 A0A0U1RQV1 116 aa12.89□□□□□ -0.35
PTP4A3-204ENST00000521578 KRTAP10-8P60410 259 aa12.89□□□□□ -0.35
PTP4A3-204ENST00000521578 DMBT1Q9UGM3 2413 aaPredicted RBP12.89□□□□□ -0.35
PTP4A3-204ENST00000521578 SSBP3-AS1Q7Z2R9 100 aa12.88□□□□□ -0.35
PTP4A3-204ENST00000521578 RPS28P62857 69 aaKnown RBP12.86□□□□□ -0.35
PTP4A3-204ENST00000521578 HRCT1Q6UXD1 115 aa12.86□□□□□ -0.35
PTP4A3-204ENST00000521578 TYMSOSQ8TAI1 123 aa12.85□□□□□ -0.35
PTP4A3-204ENST00000521578 WFDC13Q8IUB5 93 aa12.85□□□□□ -0.35
PTP4A3-204ENST00000521578 NDUFB1O75438 58 aa12.82□□□□□ -0.36
PTP4A3-204ENST00000521578 CASC2Q6XLA1 102 aa12.82□□□□□ -0.36
PTP4A3-204ENST00000521578 CD164Q04900 197 aa12.81□□□□□ -0.36
PTP4A3-204ENST00000521578 FAM236DA0A1B0GTK5 79 aa12.8□□□□□ -0.36
PTP4A3-204ENST00000521578 FAM236CP0DP71 79 aa12.8□□□□□ -0.36
PTP4A3-204ENST00000521578 C5orf47Q569G3 176 aa12.8□□□□□ -0.36
PTP4A3-204ENST00000521578 MMP24-AS1A0A0U1RRL7 71 aa12.77□□□□□ -0.36
PTP4A3-204ENST00000521578 ZCCHC13Q8WW36 166 aaKnown RBP12.74□□□□□ -0.37
PTP4A3-204ENST00000521578 ASB16-AS1Q495Z4 193 aa12.73□□□□□ -0.37
PTP4A3-204ENST00000521578 ATP5EP56381 51 aaPredicted RBP12.71□□□□□ -0.38
PTP4A3-204ENST00000521578 A0A1B0GVX0 72 aa12.7□□□□□ -0.38
PTP4A3-204ENST00000521578 LINC00304Q8N9R0 145 aa12.7□□□□□ -0.38
PTP4A3-204ENST00000521578 HERC1Q15751 4861 aa12.69□□□□□ -0.38
PTP4A3-204ENST00000521578 hDV103S1A0JD37 113 aa12.69□□□□□ -0.38
PTP4A3-204ENST00000521578 C4orf48Q5BLP8 95 aa12.69□□□□□ -0.38
PTP4A3-204ENST00000521578 C8orf17Q9NRJ1 99 aa12.68□□□□□ -0.38
PTP4A3-204ENST00000521578 MP68P56378 58 aa12.65□□□□□ -0.38
PTP4A3-204ENST00000521578 SERP1Q9Y6X1 66 aa12.65□□□□□ -0.38
PTP4A3-204ENST00000521578 SPAG11AQ6PDA7 123 aa12.64□□□□□ -0.39
PTP4A3-204ENST00000521578 IGHV6-1A0A0B4J1U7 121 aa12.62□□□□□ -0.39
PTP4A3-204ENST00000521578 H3BPC8 53 aa12.62□□□□□ -0.39
PTP4A3-204ENST00000521578 SPINK1P00995 79 aa12.62□□□□□ -0.39
PTP4A3-204ENST00000521578 Q5XG85 94 aa12.61□□□□□ -0.39
PTP4A3-204ENST00000521578 LIMD2Q9BT23 127 aa12.59□□□□□ -0.39
PTP4A3-204ENST00000521578 H0Y9P7 68 aa12.58□□□□□ -0.4
PTP4A3-204ENST00000521578 TP53AIP1Q9HCN2 124 aa12.58□□□□□ -0.4
PTP4A3-204ENST00000521578 RPS29P62273 56 aaKnown RBP12.56□□□□□ -0.4
PTP4A3-204ENST00000521578 LINC00208Q96KT6 92 aa12.55□□□□□ -0.4
PTP4A3-204ENST00000521578 MRPL34Q9BQ48 92 aaKnown RBP12.54□□□□□ -0.4
PTP4A3-204ENST00000521578 TRAV22A0A0B4J277 110 aa12.53□□□□□ -0.4
PTP4A3-204ENST00000521578 NOTCH2NLQ7Z3S9 236 aa12.53□□□□□ -0.4
PTP4A3-204ENST00000521578 C8orf87E5RJ46 101 aa12.48□□□□□ -0.41
PTP4A3-204ENST00000521578 C1orf195Q5TG92 126 aa12.48□□□□□ -0.41
PTP4A3-204ENST00000521578 C1orf64Q8NEQ6 169 aa12.48□□□□□ -0.41
PTP4A3-204ENST00000521578 RETNLBQ9BQ08 111 aa12.46□□□□□ -0.41
PTP4A3-204ENST00000521578 NDUFS5O43920 106 aa12.42□□□□□ -0.42
PTP4A3-204ENST00000521578 CYP4F30PQ9H0H9 118 aa12.42□□□□□ -0.42
PTP4A3-204ENST00000521578 SPANXA2-OT1Q8N9U9 137 aa12.4□□□□□ -0.43
PTP4A3-204ENST00000521578 SMIM26A0A096LP01 95 aa12.38□□□□□ -0.43
PTP4A3-204ENST00000521578 PRR4Q16378 134 aa12.37□□□□□ -0.43
PTP4A3-204ENST00000521578 LINC00313P59037 77 aa12.37□□□□□ -0.43
PTP4A3-204ENST00000521578 HMCN2Q8NDA2 5059 aa12.36□□□□□ -0.43
PTP4A3-204ENST00000521578 KRTAP13-3Q3SY46 172 aa12.3□□□□□ -0.44
PTP4A3-204ENST00000521578 Q8N9P0 234 aaPredicted RBP12.28□□□□□ -0.44
PTP4A3-204ENST00000521578 FP248Q71RG6 208 aaPredicted RBP12.28□□□□□ -0.44
PTP4A3-204ENST00000521578 Q5W150 140 aa12.27□□□□□ -0.45
PTP4A3-204ENST00000521578 IGLV7-46A0A075B6I9 117 aa12.25□□□□□ -0.45
PTP4A3-204ENST00000521578 KRTAP16-1A8MUX0 517 aa12.25□□□□□ -0.45
PTP4A3-204ENST00000521578 LOC101927531A0A1B0GV80 90 aa12.24□□□□□ -0.45
PTP4A3-204ENST00000521578 LPAP08519 4548 aa12.22□□□□□ -0.45
PTP4A3-204ENST00000521578 C4orf26Q17RF5 130 aa12.21□□□□□ -0.45
PTP4A3-204ENST00000521578 PCOTHQ58A44 107 aa12.2□□□□□ -0.46
PTP4A3-204ENST00000521578 LRP2P98164 4655 aa12.18□□□□□ -0.46
PTP4A3-204ENST00000521578 TPRXLQ17RH7 258 aa12.11□□□□□ -0.47
PTP4A3-204ENST00000521578 MPLKIPQ8TAP9 179 aa12.06□□□□□ -0.48
PTP4A3-204ENST00000521578 C9orf92A6NGG3 77 aa12.05□□□□□ -0.48
PTP4A3-204ENST00000521578 IGKV2-30P06310 120 aa12.04□□□□□ -0.48
PTP4A3-204ENST00000521578 Q1T7F1 81 aa12.04□□□□□ -0.48
PTP4A3-204ENST00000521578 COA5Q86WW8 74 aa12.02□□□□□ -0.49
PTP4A3-204ENST00000521578 HRES1P13985 223 aa11.94□□□□□ -0.5
PTP4A3-204ENST00000521578 V9GYY9 64 aa11.93□□□□□ -0.5
PTP4A3-204ENST00000521578 XP32Q5T750 250 aa11.92□□□□□ -0.5
PTP4A3-204ENST00000521578 UBR4Q5T4S7 5183 aa11.92□□□□□ -0.5
PTP4A3-204ENST00000521578 DMAC1Q96GE9 116 aa11.87□□□□□ -0.51
PTP4A3-204ENST00000521578 C20orf166-AS1Q96NR2 134 aa11.87□□□□□ -0.51
PTP4A3-204ENST00000521578 A8MUU9 505 aa11.86□□□□□ -0.51
PTP4A3-204ENST00000521578 IGKV2D-30A0A075B6S6 120 aa11.85□□□□□ -0.51
PTP4A3-204ENST00000521578 ACYP2P14621 99 aa11.85□□□□□ -0.51
PTP4A3-204ENST00000521578 SVIPQ8NHG7 77 aa11.83□□□□□ -0.52
PTP4A3-204ENST00000521578 Q75L30 129 aa11.77□□□□□ -0.52
PTP4A3-204ENST00000521578 C7orf65Q6ZTY9 151 aa11.77□□□□□ -0.53
PTP4A3-204ENST00000521578 PSPHP1O15172 72 aa11.76□□□□□ -0.53
PTP4A3-204ENST00000521578 A8MUN3 132 aa11.74□□□□□ -0.53
PTP4A3-204ENST00000521578 RPL37P61927 97 aaKnown RBP11.74□□□□□ -0.53
PTP4A3-204ENST00000521578 MUC17Q685J3 4493 aa11.73□□□□□ -0.53
PTP4A3-204ENST00000521578 SEC61BP60468 96 aaKnown RBP11.72□□□□□ -0.53
PTP4A3-204ENST00000521578 LINC01558Q9Y6Z2 57 aa11.71□□□□□ -0.54
PTP4A3-204ENST00000521578 Q5VV11 94 aa11.69□□□□□ -0.54
PTP4A3-204ENST00000521578 ATP11AUNQ6ZP68 121 aa11.67□□□□□ -0.54
PTP4A3-204ENST00000521578 RNF213Q63HN8 5207 aa11.67□□□□□ -0.54
PTP4A3-204ENST00000521578 PRR15LQ9BU68 103 aa11.66□□□□□ -0.54
PTP4A3-204ENST00000521578 CHKB-CPT1BH3BT56 60 aa11.65□□□□□ -0.54
PTP4A3-204ENST00000521578 PRO0628Q9UI54 55 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms