RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 HRCT1Q6UXD1 115 aa7.13□□□□□ -1.27
HDAC2-211ENST00000521233 TRBV7-4A0A0J9YYF1 115 aa7.12□□□□□ -1.27
HDAC2-211ENST00000521233 KRTAP4-7Q9BYR0 210 aa7.12□□□□□ -1.27
HDAC2-211ENST00000521233 UBL5Q9BZL1 73 aa7.12□□□□□ -1.27
HDAC2-211ENST00000521233 A0A1B0GW54 56 aa7.11□□□□□ -1.27
HDAC2-211ENST00000521233 Q5XG85 94 aa7.11□□□□□ -1.27
HDAC2-211ENST00000521233 IGFL1Q6UW32 110 aa7.11□□□□□ -1.27
HDAC2-211ENST00000521233 LINC00846Q9NV44 126 aa7.11□□□□□ -1.27
HDAC2-211ENST00000521233 IGLV7-46A0A075B6I9 117 aa7.09□□□□□ -1.27
HDAC2-211ENST00000521233 ANAPC13Q9BS18 74 aa7.09□□□□□ -1.27
HDAC2-211ENST00000521233 A0A0G2JQZ4 141 aa7.08□□□□□ -1.28
HDAC2-211ENST00000521233 TPRXLQ17RH7 258 aa7.07□□□□□ -1.28
HDAC2-211ENST00000521233 SS18L2Q9UHA2 77 aa7.05□□□□□ -1.28
HDAC2-211ENST00000521233 LRP2P98164 4655 aa7.04□□□□□ -1.28
HDAC2-211ENST00000521233 UBR4Q5T4S7 5183 aa7.04□□□□□ -1.28
HDAC2-211ENST00000521233 ASB16-AS1Q495Z4 193 aa7.03□□□□□ -1.28
HDAC2-211ENST00000521233 LCE1DQ5T752 114 aa7.03□□□□□ -1.28
HDAC2-211ENST00000521233 FAM236AA0A1B0GUQ0 79 aa7.02□□□□□ -1.29
HDAC2-211ENST00000521233 FAM236BA0A1B0GV22 79 aa7.02□□□□□ -1.29
HDAC2-211ENST00000521233 ATOX1O00244 68 aa7.02□□□□□ -1.29
HDAC2-211ENST00000521233 HIST1H4AP62805 103 aaKnown RBP7.02□□□□□ -1.29
HDAC2-211ENST00000521233 CXCL6P80162 114 aa7.02□□□□□ -1.29
HDAC2-211ENST00000521233 C1orf195Q5TG92 126 aa7□□□□□ -1.29
HDAC2-211ENST00000521233 Q6ZVQ6 151 aa7□□□□□ -1.29
HDAC2-211ENST00000521233 IGKV3D-7A0A0C4DH55 119 aa6.99□□□□□ -1.29
HDAC2-211ENST00000521233 KRTAP13-3Q3SY46 172 aa6.99□□□□□ -1.29
HDAC2-211ENST00000521233 A0A087WSZ3 146 aa6.98□□□□□ -1.29
HDAC2-211ENST00000521233 A0A1W2PNM2 257 aa6.98□□□□□ -1.29
HDAC2-211ENST00000521233 LPAP08519 4548 aa6.95□□□□□ -1.3
HDAC2-211ENST00000521233 UQCRQO14949 82 aa6.94□□□□□ -1.3
HDAC2-211ENST00000521233 NREPQ16612 68 aa6.94□□□□□ -1.3
HDAC2-211ENST00000521233 SMIM20Q8N5G0 67 aa6.94□□□□□ -1.3
HDAC2-211ENST00000521233 COX7CP15954 63 aa6.92□□□□□ -1.3
HDAC2-211ENST00000521233 SERP2Q8N6R1 65 aa6.9□□□□□ -1.3
HDAC2-211ENST00000521233 A0A087WVE0 104 aa6.88□□□□□ -1.31
HDAC2-211ENST00000521233 BPY2O14599 106 aa6.88□□□□□ -1.31
HDAC2-211ENST00000521233 KRTAP4-9Q9BYQ8 210 aa6.88□□□□□ -1.31
HDAC2-211ENST00000521233 C9orf92A6NGG3 77 aa6.87□□□□□ -1.31
HDAC2-211ENST00000521233 CCDC179H3BU77 68 aa6.87□□□□□ -1.31
HDAC2-211ENST00000521233 Q96NJ1 140 aa6.87□□□□□ -1.31
HDAC2-211ENST00000521233 RNF213Q63HN8 5207 aa6.86□□□□□ -1.31
HDAC2-211ENST00000521233 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
HDAC2-211ENST00000521233 KRTAP4-2Q9BYR5 136 aa6.84□□□□□ -1.31
HDAC2-211ENST00000521233 TRAV7A0A075B6U4 112 aa6.83□□□□□ -1.32
HDAC2-211ENST00000521233 IGKV4-1P06312 121 aa6.83□□□□□ -1.32
HDAC2-211ENST00000521233 LINC00472Q9H8W2 130 aa6.83□□□□□ -1.32
HDAC2-211ENST00000521233 J3KT08 172 aa6.82□□□□□ -1.32
HDAC2-211ENST00000521233 MUC17Q685J3 4493 aa6.78□□□□□ -1.32
HDAC2-211ENST00000521233 RPL37P61927 97 aaKnown RBP6.77□□□□□ -1.33
HDAC2-211ENST00000521233 DEFB116Q30KQ4 102 aa6.77□□□□□ -1.33
HDAC2-211ENST00000521233 NDUFB1O75438 58 aa6.75□□□□□ -1.33
HDAC2-211ENST00000521233 IGHV6-1A0A0B4J1U7 121 aa6.74□□□□□ -1.33
HDAC2-211ENST00000521233 A0A0U1RQV1 116 aa6.74□□□□□ -1.33
HDAC2-211ENST00000521233 A0A1B0GVX0 72 aa6.74□□□□□ -1.33
HDAC2-211ENST00000521233 C8orf87E5RJ46 101 aa6.74□□□□□ -1.33
HDAC2-211ENST00000521233 DSCR10P59022 87 aa6.74□□□□□ -1.33
HDAC2-211ENST00000521233 LINC00313P59037 77 aa6.74□□□□□ -1.33
HDAC2-211ENST00000521233 Q75L30 129 aa6.74□□□□□ -1.33
HDAC2-211ENST00000521233 TMEM258P61165 79 aa6.73□□□□□ -1.33
HDAC2-211ENST00000521233 NDUFC1O43677 76 aa6.72□□□□□ -1.33
HDAC2-211ENST00000521233 KLKP1Q107X0 134 aa6.72□□□□□ -1.33
HDAC2-211ENST00000521233 PCOTHQ58A44 107 aa6.72□□□□□ -1.33
HDAC2-211ENST00000521233 A8MWP4 228 aa6.71□□□□□ -1.34
HDAC2-211ENST00000521233 C20orf166-AS1Q96NR2 134 aa6.71□□□□□ -1.34
HDAC2-211ENST00000521233 HCG22E2RYF7 251 aa6.7□□□□□ -1.34
HDAC2-211ENST00000521233 Q8N9L7 120 aa6.7□□□□□ -1.34
HDAC2-211ENST00000521233 OCR1Q9BZK8 76 aa6.7□□□□□ -1.34
HDAC2-211ENST00000521233 A8MUU9 505 aa6.69□□□□□ -1.34
HDAC2-211ENST00000521233 K7EQZ3 153 aa6.69□□□□□ -1.34
HDAC2-211ENST00000521233 ATP11AUNQ6ZP68 121 aa6.69□□□□□ -1.34
HDAC2-211ENST00000521233 MUC2Q02817 5179 aa6.68□□□□□ -1.34
HDAC2-211ENST00000521233 C20orf197Q8N268 126 aa6.68□□□□□ -1.34
HDAC2-211ENST00000521233 PRR15Q8IV56 129 aa6.67□□□□□ -1.34
HDAC2-211ENST00000521233 KRTAP16-1A8MUX0 517 aa6.66□□□□□ -1.34
HDAC2-211ENST00000521233 NOTCH2NLQ7Z3S9 236 aa6.65□□□□□ -1.34
HDAC2-211ENST00000521233 C8orf17Q9NRJ1 99 aa6.65□□□□□ -1.34
HDAC2-211ENST00000521233 RPS28P62857 69 aaKnown RBP6.64□□□□□ -1.35
HDAC2-211ENST00000521233 C5orf47Q569G3 176 aa6.64□□□□□ -1.35
HDAC2-211ENST00000521233 TMEM254Q8TBM7 123 aa6.64□□□□□ -1.35
HDAC2-211ENST00000521233 ATP5EP56381 51 aaPredicted RBP6.63□□□□□ -1.35
HDAC2-211ENST00000521233 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
HDAC2-211ENST00000521233 H3BS24 57 aa6.61□□□□□ -1.35
HDAC2-211ENST00000521233 H7BZZ5 65 aa6.61□□□□□ -1.35
HDAC2-211ENST00000521233 H3BPC8 53 aa6.6□□□□□ -1.35
HDAC2-211ENST00000521233 CASC2Q6XLA1 102 aa6.6□□□□□ -1.35
HDAC2-211ENST00000521233 CYSTM1Q9H1C7 97 aa6.6□□□□□ -1.35
HDAC2-211ENST00000521233 MMP24-AS1A0A0U1RRL7 71 aa6.59□□□□□ -1.35
HDAC2-211ENST00000521233 KRTAP4-11Q9BYQ6 195 aa6.58□□□□□ -1.36
HDAC2-211ENST00000521233 FAM236DA0A1B0GTK5 79 aa6.57□□□□□ -1.36
HDAC2-211ENST00000521233 FAM236CP0DP71 79 aa6.57□□□□□ -1.36
HDAC2-211ENST00000521233 Q8N9P0 234 aaPredicted RBP6.57□□□□□ -1.36
HDAC2-211ENST00000521233 hDV103S1A0JD37 113 aa6.56□□□□□ -1.36
HDAC2-211ENST00000521233 MP68P56378 58 aa6.56□□□□□ -1.36
HDAC2-211ENST00000521233 WFDC13Q8IUB5 93 aa6.56□□□□□ -1.36
HDAC2-211ENST00000521233 TP53AIP1Q9HCN2 124 aa6.56□□□□□ -1.36
HDAC2-211ENST00000521233 SNURFQ9Y675 71 aa6.56□□□□□ -1.36
HDAC2-211ENST00000521233 MRPL34Q9BQ48 92 aaKnown RBP6.55□□□□□ -1.36
HDAC2-211ENST00000521233 ZCCHC13Q8WW36 166 aaKnown RBP6.54□□□□□ -1.36
HDAC2-211ENST00000521233 FAT4Q6V0I7 4981 aa6.54□□□□□ -1.36
HDAC2-211ENST00000521233 SERP1Q9Y6X1 66 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms