RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 ACYP1P07311 99 aa9.79□□□□□ -0.84
SNHG6-204ENST00000521127 PDE6GP18545 87 aa9.79□□□□□ -0.84
SNHG6-204ENST00000521127 C21orf62-AS1Q17RA5 79 aa9.79□□□□□ -0.84
SNHG6-204ENST00000521127 Q6ZQT0 140 aa9.79□□□□□ -0.84
SNHG6-204ENST00000521127 CCKP06307 115 aa9.78□□□□□ -0.84
SNHG6-204ENST00000521127 DSCR8Q96T75 97 aa9.75□□□□□ -0.85
SNHG6-204ENST00000521127 A0A1B0GV72 72 aa9.74□□□□□ -0.85
SNHG6-204ENST00000521127 SSPOA2VEC9 5147 aa9.73□□□□□ -0.85
SNHG6-204ENST00000521127 VPS25Q9BRG1 176 aa9.71□□□□□ -0.86
SNHG6-204ENST00000521127 USH2AO75445 5202 aa9.71□□□□□ -0.86
SNHG6-204ENST00000521127 Q6Q795 121 aa9.68□□□□□ -0.86
SNHG6-204ENST00000521127 F8WEM9 126 aa9.67□□□□□ -0.86
SNHG6-204ENST00000521127 LINC00846Q9NV44 126 aa9.67□□□□□ -0.86
SNHG6-204ENST00000521127 A0A1B0GW54 56 aa9.66□□□□□ -0.86
SNHG6-204ENST00000521127 KRTAP9-8Q9BYQ0 159 aa9.65□□□□□ -0.86
SNHG6-204ENST00000521127 A0A1W2PNM2 257 aa9.64□□□□□ -0.87
SNHG6-204ENST00000521127 Q6JHZ5 121 aa9.64□□□□□ -0.87
SNHG6-204ENST00000521127 IGFL1Q6UW32 110 aa9.63□□□□□ -0.87
SNHG6-204ENST00000521127 LINC00643Q86TS7 51 aa9.62□□□□□ -0.87
SNHG6-204ENST00000521127 SIGMAR1Q99720 223 aa9.59□□□□□ -0.87
SNHG6-204ENST00000521127 MT-ATP8P03928 68 aa9.58□□□□□ -0.88
SNHG6-204ENST00000521127 FCGBPQ9Y6R7 5405 aaPredicted RBP9.57□□□□□ -0.88
SNHG6-204ENST00000521127 ATP11AUNQ6ZP68 121 aa9.57□□□□□ -0.88
SNHG6-204ENST00000521127 Q75L30 129 aa9.56□□□□□ -0.88
SNHG6-204ENST00000521127 UBL5Q9BZL1 73 aa9.56□□□□□ -0.88
SNHG6-204ENST00000521127 TRBV7-7A0A0K0K1E9 115 aa9.55□□□□□ -0.88
SNHG6-204ENST00000521127 Q6ZVQ6 151 aa9.55□□□□□ -0.88
SNHG6-204ENST00000521127 ATP5EP2Q5VTU8 51 aa9.54□□□□□ -0.88
SNHG6-204ENST00000521127 IMUPQ9GZP8 106 aa9.5□□□□□ -0.89
SNHG6-204ENST00000521127 MT2AP02795 61 aa9.46□□□□□ -0.9
SNHG6-204ENST00000521127 CXCL6P80162 114 aa9.46□□□□□ -0.9
SNHG6-204ENST00000521127 KRTAP19-1Q8IUB9 90 aa9.46□□□□□ -0.9
SNHG6-204ENST00000521127 SCGB1A1P11684 91 aa9.45□□□□□ -0.9
SNHG6-204ENST00000521127 NREPQ16612 68 aa9.45□□□□□ -0.9
SNHG6-204ENST00000521127 A0A087WSZ3 146 aa9.44□□□□□ -0.9
SNHG6-204ENST00000521127 LCE2BO14633 110 aa9.44□□□□□ -0.9
SNHG6-204ENST00000521127 Q96NJ1 140 aa9.44□□□□□ -0.9
SNHG6-204ENST00000521127 IGKV3D-7A0A0C4DH55 119 aa9.43□□□□□ -0.9
SNHG6-204ENST00000521127 C20orf166-AS1Q96NR2 134 aa9.4□□□□□ -0.9
SNHG6-204ENST00000521127 MT1FP04733 61 aa9.39□□□□□ -0.91
SNHG6-204ENST00000521127 A8MUU9 505 aa9.38□□□□□ -0.91
SNHG6-204ENST00000521127 KRTAP9-3Q9BYQ3 159 aa9.37□□□□□ -0.91
SNHG6-204ENST00000521127 KRTAP3-3Q9BYR6 98 aa9.37□□□□□ -0.91
SNHG6-204ENST00000521127 KRTAP3-2Q9BYR7 98 aa9.37□□□□□ -0.91
SNHG6-204ENST00000521127 LINC00472Q9H8W2 130 aa9.37□□□□□ -0.91
SNHG6-204ENST00000521127 SS18L2Q9UHA2 77 aa9.37□□□□□ -0.91
SNHG6-204ENST00000521127 BPY2O14599 106 aa9.36□□□□□ -0.91
SNHG6-204ENST00000521127 DSCR10P59022 87 aa9.34□□□□□ -0.91
SNHG6-204ENST00000521127 HIST1H4AP62805 103 aaKnown RBP9.34□□□□□ -0.91
SNHG6-204ENST00000521127 IGKV4-1P06312 121 aa9.31□□□□□ -0.92
SNHG6-204ENST00000521127 A0A087WVE0 104 aa9.3□□□□□ -0.92
SNHG6-204ENST00000521127 KRTAP16-1A8MUX0 517 aa9.29□□□□□ -0.92
SNHG6-204ENST00000521127 J3KT08 172 aa9.29□□□□□ -0.92
SNHG6-204ENST00000521127 KRTAP10-10P60014 251 aa9.29□□□□□ -0.92
SNHG6-204ENST00000521127 FAM236AA0A1B0GUQ0 79 aa9.28□□□□□ -0.92
SNHG6-204ENST00000521127 FAM236BA0A1B0GV22 79 aa9.28□□□□□ -0.92
SNHG6-204ENST00000521127 Q8N9L7 120 aa9.26□□□□□ -0.93
SNHG6-204ENST00000521127 FAM236DA0A1B0GTK5 79 aa9.25□□□□□ -0.93
SNHG6-204ENST00000521127 K7EQZ3 153 aa9.25□□□□□ -0.93
SNHG6-204ENST00000521127 FAM236CP0DP71 79 aa9.25□□□□□ -0.93
SNHG6-204ENST00000521127 MACF1Q9UPN3 7388 aaKnown RBP9.25□□□□□ -0.93
SNHG6-204ENST00000521127 A8MWP4 228 aa9.24□□□□□ -0.93
SNHG6-204ENST00000521127 DEFB116Q30KQ4 102 aa9.23□□□□□ -0.93
SNHG6-204ENST00000521127 MPLKIPQ8TAP9 179 aa9.23□□□□□ -0.93
SNHG6-204ENST00000521127 SYNE2Q8WXH0 6885 aaKnown RBP9.23□□□□□ -0.93
SNHG6-204ENST00000521127 HRES1P13985 223 aa9.21□□□□□ -0.94
SNHG6-204ENST00000521127 PRR15Q8IV56 129 aa9.21□□□□□ -0.94
SNHG6-204ENST00000521127 ATOX1O00244 68 aa9.19□□□□□ -0.94
SNHG6-204ENST00000521127 PCP4P48539 62 aa9.16□□□□□ -0.94
SNHG6-204ENST00000521127 KRTAP19-6Q3LI70 58 aa9.16□□□□□ -0.94
SNHG6-204ENST00000521127 RBM12B-AS1Q9P1G2 102 aa9.15□□□□□ -0.94
SNHG6-204ENST00000521127 A0A1B0GVX0 72 aa9.14□□□□□ -0.95
SNHG6-204ENST00000521127 HCG22E2RYF7 251 aa9.14□□□□□ -0.95
SNHG6-204ENST00000521127 NDUFB1O75438 58 aa9.14□□□□□ -0.95
SNHG6-204ENST00000521127 MMP24-AS1A0A0U1RRL7 71 aa9.12□□□□□ -0.95
SNHG6-204ENST00000521127 NOTCH2NLQ7Z3S9 236 aa9.12□□□□□ -0.95
SNHG6-204ENST00000521127 ANAPC13Q9BS18 74 aa9.12□□□□□ -0.95
SNHG6-204ENST00000521127 LINC00313P59037 77 aa9.1□□□□□ -0.95
SNHG6-204ENST00000521127 SMIM20Q8N5G0 67 aa9.09□□□□□ -0.95
SNHG6-204ENST00000521127 C8orf17Q9NRJ1 99 aa9.08□□□□□ -0.96
SNHG6-204ENST00000521127 SERP2Q8N6R1 65 aa9.07□□□□□ -0.96
SNHG6-204ENST00000521127 OCR1Q9BZK8 76 aa9.06□□□□□ -0.96
SNHG6-204ENST00000521127 TRAV7A0A075B6U4 112 aa9.05□□□□□ -0.96
SNHG6-204ENST00000521127 C8orf87E5RJ46 101 aa9.05□□□□□ -0.96
SNHG6-204ENST00000521127 CASC2Q6XLA1 102 aa9.05□□□□□ -0.96
SNHG6-204ENST00000521127 IGHV6-1A0A0B4J1U7 121 aa9.04□□□□□ -0.96
SNHG6-204ENST00000521127 COX7CP15954 63 aa9.03□□□□□ -0.96
SNHG6-204ENST00000521127 WFDC13Q8IUB5 93 aa9.03□□□□□ -0.96
SNHG6-204ENST00000521127 KRTAP6-3Q3LI67 103 aa9.02□□□□□ -0.97
SNHG6-204ENST00000521127 hDV103S1A0JD37 113 aa9.01□□□□□ -0.97
SNHG6-204ENST00000521127 TMEM254Q8TBM7 123 aa9.01□□□□□ -0.97
SNHG6-204ENST00000521127 UQCRQO14949 82 aa9□□□□□ -0.97
SNHG6-204ENST00000521127 MRPL34Q9BQ48 92 aaKnown RBP8.97□□□□□ -0.97
SNHG6-204ENST00000521127 CCDC179H3BU77 68 aa8.96□□□□□ -0.98
SNHG6-204ENST00000521127 Q8N9P0 234 aaPredicted RBP8.9□□□□□ -0.98
SNHG6-204ENST00000521127 TP53AIP1Q9HCN2 124 aa8.9□□□□□ -0.98
SNHG6-204ENST00000521127 SPINK7P58062 85 aa8.89□□□□□ -0.99
SNHG6-204ENST00000521127 KLKP1Q107X0 134 aa8.87□□□□□ -0.99
SNHG6-204ENST00000521127 C5orf47Q569G3 176 aa8.87□□□□□ -0.99
SNHG6-204ENST00000521127 ZCCHC13Q8WW36 166 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms