RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 U3KQA8 63 aa0.96□□□□□ -2.26
SQLE-204ENST00000520493 UMAD1C9J7I0 102 aa0.95□□□□□ -2.26
SQLE-204ENST00000520493 PRH1P02810 166 aa0.95□□□□□ -2.26
SQLE-204ENST00000520493 SAA2P0DJI9 122 aaPredicted RBP0.95□□□□□ -2.26
SQLE-204ENST00000520493 SPINK7P58062 85 aa0.95□□□□□ -2.26
SQLE-204ENST00000520493 C6orf201Q7Z4U5 140 aa0.95□□□□□ -2.26
SQLE-204ENST00000520493 UBE2DNLQ8IWF7 75 aa0.95□□□□□ -2.26
SQLE-204ENST00000520493 TRGV9Q99603 122 aa0.95□□□□□ -2.26
SQLE-204ENST00000520493 NPVFQ9HCQ7 196 aa0.95□□□□□ -2.26
SQLE-204ENST00000520493 SMCO4Q9NRQ5 59 aa0.95□□□□□ -2.26
SQLE-204ENST00000520493 CACFD1Q9UGQ2 172 aa0.95□□□□□ -2.26
SQLE-204ENST00000520493 ARL2-SNX15V9GYD0 113 aa0.95□□□□□ -2.26
SQLE-204ENST00000520493 ALMS1Q8TCU4 4167 aa0.95□□□□□ -2.26
SQLE-204ENST00000520493 PKD1P98161 4303 aa0.95□□□□□ -2.26
SQLE-204ENST00000520493 KNL1Q8NG31 2342 aa0.94□□□□□ -2.26
SQLE-204ENST00000520493 DNAH9Q9NYC9 4486 aa0.94□□□□□ -2.26
SQLE-204ENST00000520493 DYNC1H1Q14204 4646 aaKnown RBP0.94□□□□□ -2.26
SQLE-204ENST00000520493 C7orf77A4D0Y5 90 aa0.94□□□□□ -2.26
SQLE-204ENST00000520493 SFTA3P0C7M3 94 aa0.94□□□□□ -2.26
SQLE-204ENST00000520493 IGLC1P0CG04 106 aa0.94□□□□□ -2.26
SQLE-204ENST00000520493 ASIPP42127 132 aa0.94□□□□□ -2.26
SQLE-204ENST00000520493 SERF2P84101 59 aa0.94□□□□□ -2.26
SQLE-204ENST00000520493 PIGYQ3MUY2 71 aa0.94□□□□□ -2.26
SQLE-204ENST00000520493 FAM223AQ8IWN6 122 aa0.94□□□□□ -2.26
SQLE-204ENST00000520493 SERP2Q8N6R1 65 aa0.94□□□□□ -2.26
SQLE-204ENST00000520493 SPRR4Q96PI1 79 aa0.94□□□□□ -2.26
SQLE-204ENST00000520493 PSENENQ9NZ42 101 aa0.94□□□□□ -2.26
SQLE-204ENST00000520493 CACNA1CQ13936 2221 aa0.93□□□□□ -2.26
SQLE-204ENST00000520493 A0A087WWC5 75 aa0.93□□□□□ -2.26
SQLE-204ENST00000520493 TRBV7-7A0A0K0K1E9 115 aa0.93□□□□□ -2.26
SQLE-204ENST00000520493 IQCF6A8MYZ5 107 aa0.93□□□□□ -2.26
SQLE-204ENST00000520493 NMSQ5H8A3 153 aa0.93□□□□□ -2.26
SQLE-204ENST00000520493 SPATA8Q6RVD6 105 aa0.93□□□□□ -2.26
SQLE-204ENST00000520493 CEBPZOSA8MTT3 80 aa0.92□□□□□ -2.26
SQLE-204ENST00000520493 IAPPP10997 89 aa0.92□□□□□ -2.26
SQLE-204ENST00000520493 DEFB109BQ30KR1 87 aa0.92□□□□□ -2.26
SQLE-204ENST00000520493 HEPN1Q6WQI6 88 aa0.92□□□□□ -2.26
SQLE-204ENST00000520493 GNG13Q9P2W3 67 aa0.92□□□□□ -2.26
SQLE-204ENST00000520493 FAM223BA6NKX1 122 aa0.91□□□□□ -2.26
SQLE-204ENST00000520493 DEFB108AA8MXU0 73 aa0.91□□□□□ -2.26
SQLE-204ENST00000520493 H7BZZ5 65 aa0.91□□□□□ -2.26
SQLE-204ENST00000520493 GYPAP02724 150 aa0.91□□□□□ -2.26
SQLE-204ENST00000520493 ADIRFQ15847 76 aa0.91□□□□□ -2.26
SQLE-204ENST00000520493 SFTA2Q6UW10 78 aa0.91□□□□□ -2.26
SQLE-204ENST00000520493 DEFB124Q8NES8 71 aa0.91□□□□□ -2.26
SQLE-204ENST00000520493 FDCSPQ8NFU4 85 aa0.91□□□□□ -2.26
SQLE-204ENST00000520493 TMEM167BQ9NRX6 74 aa0.91□□□□□ -2.26
SQLE-204ENST00000520493 PLECQ15149 4684 aaKnown RBP0.91□□□□□ -2.26
SQLE-204ENST00000520493 MYO7BQ6PIF6 2116 aa0.91□□□□□ -2.26
SQLE-204ENST00000520493 TRBV25-1A0A075B6N4 114 aa0.9□□□□□ -2.27
SQLE-204ENST00000520493 PRCDQ00LT1 54 aa0.9□□□□□ -2.27
SQLE-204ENST00000520493 TFF3Q07654 80 aa0.9□□□□□ -2.27
SQLE-204ENST00000520493 RPL39P5Q59GN2 51 aa0.9□□□□□ -2.27
SQLE-204ENST00000520493 C10orf113Q5VZT2 155 aa0.9□□□□□ -2.27
SQLE-204ENST00000520493 DEFB108BQ8NET1 73 aa0.9□□□□□ -2.27
SQLE-204ENST00000520493 TMEM167AQ8TBQ9 72 aa0.9□□□□□ -2.27
SQLE-204ENST00000520493 TMEM263Q8WUH6 116 aaKnown RBP0.9□□□□□ -2.27
SQLE-204ENST00000520493 GAFA1Q96PS6 74 aa0.9□□□□□ -2.27
SQLE-204ENST00000520493 KAAG1Q9UBP8 84 aa0.9□□□□□ -2.27
SQLE-204ENST00000520493 FAT2Q9NYQ8 4349 aa0.9□□□□□ -2.27
SQLE-204ENST00000520493 STARD9Q9P2P6 4700 aa0.89□□□□□ -2.27
SQLE-204ENST00000520493 LCE6AA0A183 80 aa0.89□□□□□ -2.27
SQLE-204ENST00000520493 SMIM27A0A1W2PRY6 76 aa0.89□□□□□ -2.27
SQLE-204ENST00000520493 ZNF815PA8K554 130 aa0.89□□□□□ -2.27
SQLE-204ENST00000520493 SYS1-DBNDD2H3BUS1 97 aa0.89□□□□□ -2.27
SQLE-204ENST00000520493 PMCHL1Q16048 86 aa0.89□□□□□ -2.27
SQLE-204ENST00000520493 PYY3Q5JQD4 70 aa0.89□□□□□ -2.27
SQLE-204ENST00000520493 Q6JHZ5 121 aa0.89□□□□□ -2.27
SQLE-204ENST00000520493 LEAP2Q969E1 77 aa0.89□□□□□ -2.27
SQLE-204ENST00000520493 PRO1933Q9H354 126 aa0.89□□□□□ -2.27
SQLE-204ENST00000520493 PLAC8Q9NZF1 115 aa0.89□□□□□ -2.27
SQLE-204ENST00000520493 DNAJC13O75165 2243 aa0.88□□□□□ -2.27
SQLE-204ENST00000520493 TRBV6-1A0A0K0K1D8 114 aa0.88□□□□□ -2.27
SQLE-204ENST00000520493 M0R1W7 72 aa0.88□□□□□ -2.27
SQLE-204ENST00000520493 SPINK4O60575 86 aa0.88□□□□□ -2.27
SQLE-204ENST00000520493 HAMPP81172 84 aa0.88□□□□□ -2.27
SQLE-204ENST00000520493 WT1-ASQ06250 92 aa0.88□□□□□ -2.27
SQLE-204ENST00000520493 PLGLAQ15195 96 aa0.88□□□□□ -2.27
SQLE-204ENST00000520493 PSMG4Q5JS54 123 aa0.88□□□□□ -2.27
SQLE-204ENST00000520493 SSBP3-AS1Q7Z2R9 100 aa0.88□□□□□ -2.27
SQLE-204ENST00000520493 LINC00846Q9NV44 126 aa0.88□□□□□ -2.27
SQLE-204ENST00000520493 USF3Q68DE3 2245 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 A0A1B0GUT8 65 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 LYNX1G3V0Z9 82 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 I3L2K1 104 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 M0R3E3 92 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 NDUFA3O95167 84 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 C3orf79P0CE67 100 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 IGLC2P0DOY2 106 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 COX6A2Q02221 97 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 MINOS1Q5TGZ0 78 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 C18orf32Q8TCD1 76 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 ST20Q9HBF5 79 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 RABAC1Q9UI14 185 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 HILPDAQ9Y5L2 63 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 FAT1Q14517 4588 aa0.87□□□□□ -2.27
SQLE-204ENST00000520493 URB1O60287 2271 aaKnown RBP0.87□□□□□ -2.27
SQLE-204ENST00000520493 ANK3Q12955 4377 aaKnown RBP0.87□□□□□ -2.27
SQLE-204ENST00000520493 K7EIM0 57 aa0.86□□□□□ -2.27
SQLE-204ENST00000520493 LEPROTL1O95214 131 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms