RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 FAT4Q6V0I7 4981 aa5.36□□□□□ -1.55
CTNNA1-221ENST00000520339 NDUFC1O43677 76 aa5.35□□□□□ -1.55
CTNNA1-221ENST00000520339 NCR3O14931 201 aa5.34□□□□□ -1.55
CTNNA1-221ENST00000520339 Q6JHZ5 121 aa5.34□□□□□ -1.55
CTNNA1-221ENST00000520339 RETNLBQ9BQ08 111 aa5.34□□□□□ -1.55
CTNNA1-221ENST00000520339 ATP5EP2Q5VTU8 51 aa5.33□□□□□ -1.56
CTNNA1-221ENST00000520339 IGLV7-46A0A075B6I9 117 aa5.32□□□□□ -1.56
CTNNA1-221ENST00000520339 S100A7L2Q5SY68 101 aa5.32□□□□□ -1.56
CTNNA1-221ENST00000520339 SMIM11BQ8TCY0 68 aa5.32□□□□□ -1.56
CTNNA1-221ENST00000520339 LST1O00453 97 aa5.31□□□□□ -1.56
CTNNA1-221ENST00000520339 TPRXLQ17RH7 258 aa5.31□□□□□ -1.56
CTNNA1-221ENST00000520339 SPRR4Q96PI1 79 aa5.31□□□□□ -1.56
CTNNA1-221ENST00000520339 HIGD2AQ9BW72 106 aa5.31□□□□□ -1.56
CTNNA1-221ENST00000520339 SPRR1AP35321 89 aa5.3□□□□□ -1.56
CTNNA1-221ENST00000520339 BRK1Q8WUW1 75 aa5.3□□□□□ -1.56
CTNNA1-221ENST00000520339 TRBV10-3A0A0K0K1G6 114 aa5.29□□□□□ -1.56
CTNNA1-221ENST00000520339 IGLV6-57P01721 117 aa5.29□□□□□ -1.56
CTNNA1-221ENST00000520339 SPAG11AQ6PDA7 123 aa5.29□□□□□ -1.56
CTNNA1-221ENST00000520339 CLEC2BQ92478 149 aa5.29□□□□□ -1.56
CTNNA1-221ENST00000520339 KCNQ1DNQ9H478 68 aa5.29□□□□□ -1.56
CTNNA1-221ENST00000520339 TRAV23DV6A0A075B6W5 121 aa5.28□□□□□ -1.56
CTNNA1-221ENST00000520339 KRTAP4-16G5E9R7 235 aaPredicted RBP5.28□□□□□ -1.56
CTNNA1-221ENST00000520339 KLKP1Q107X0 134 aa5.28□□□□□ -1.56
CTNNA1-221ENST00000520339 FP248Q71RG6 208 aaPredicted RBP5.28□□□□□ -1.56
CTNNA1-221ENST00000520339 H0YGX0 51 aa5.27□□□□□ -1.57
CTNNA1-221ENST00000520339 SMCR5Q8TEV8 140 aa5.27□□□□□ -1.57
CTNNA1-221ENST00000520339 ZNF706Q9Y5V0 76 aaPredicted RBP5.27□□□□□ -1.57
CTNNA1-221ENST00000520339 C6orf99Q4VX62 202 aa5.26□□□□□ -1.57
CTNNA1-221ENST00000520339 DNAL4O96015 105 aa5.25□□□□□ -1.57
CTNNA1-221ENST00000520339 LINC00483Q53H64 154 aa5.25□□□□□ -1.57
CTNNA1-221ENST00000520339 Q8NBF4 154 aa5.25□□□□□ -1.57
CTNNA1-221ENST00000520339 FAM218AQ96MZ4 157 aa5.25□□□□□ -1.57
CTNNA1-221ENST00000520339 CYSTM1Q9H1C7 97 aa5.25□□□□□ -1.57
CTNNA1-221ENST00000520339 ETDCA0A1B0GVM5 59 aa5.24□□□□□ -1.57
CTNNA1-221ENST00000520339 H7BZZ5 65 aa5.24□□□□□ -1.57
CTNNA1-221ENST00000520339 ZNF73O43830 326 aaPredicted RBP5.24□□□□□ -1.57
CTNNA1-221ENST00000520339 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
CTNNA1-221ENST00000520339 TRAV7A0A075B6U4 112 aa5.23□□□□□ -1.57
CTNNA1-221ENST00000520339 ERC2-IT1O76042 136 aa5.23□□□□□ -1.57
CTNNA1-221ENST00000520339 SPINK1P00995 79 aa5.23□□□□□ -1.57
CTNNA1-221ENST00000520339 CCKP06307 115 aa5.23□□□□□ -1.57
CTNNA1-221ENST00000520339 NDUFS5O43920 106 aa5.22□□□□□ -1.57
CTNNA1-221ENST00000520339 COX7BP24311 80 aa5.22□□□□□ -1.57
CTNNA1-221ENST00000520339 KRTAP13-3Q3SY46 172 aa5.22□□□□□ -1.57
CTNNA1-221ENST00000520339 ELOF1P60002 83 aaKnown RBP5.21□□□□□ -1.58
CTNNA1-221ENST00000520339 Q6ZVQ6 151 aa5.21□□□□□ -1.58
CTNNA1-221ENST00000520339 LINC00575Q6W349 94 aa5.2□□□□□ -1.58
CTNNA1-221ENST00000520339 SSBP3-AS1Q7Z2R9 100 aa5.2□□□□□ -1.58
CTNNA1-221ENST00000520339 NOTCH2NLQ7Z3S9 236 aa5.2□□□□□ -1.58
CTNNA1-221ENST00000520339 Q9BRP9 147 aa5.2□□□□□ -1.58
CTNNA1-221ENST00000520339 MOBPQ13875 183 aa5.19□□□□□ -1.58
CTNNA1-221ENST00000520339 ASB16-AS1Q495Z4 193 aa5.19□□□□□ -1.58
CTNNA1-221ENST00000520339 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
CTNNA1-221ENST00000520339 ORMDL1Q9P0S3 153 aa5.19□□□□□ -1.58
CTNNA1-221ENST00000520339 BAALC-AS2P0C853 105 aa5.18□□□□□ -1.58
CTNNA1-221ENST00000520339 RPS29P62273 56 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-221ENST00000520339 Q6ZRX8 168 aa5.18□□□□□ -1.58
CTNNA1-221ENST00000520339 Q8N377 158 aa5.18□□□□□ -1.58
CTNNA1-221ENST00000520339 RBM3P98179 157 aaKnown RBP5.17□□□□□ -1.58
CTNNA1-221ENST00000520339 OBSCN-AS1Q96MR7 158 aa5.17□□□□□ -1.58
CTNNA1-221ENST00000520339 KRTAP4-1Q9BYQ7 146 aa5.17□□□□□ -1.58
CTNNA1-221ENST00000520339 H3BQ85 93 aa5.16□□□□□ -1.58
CTNNA1-221ENST00000520339 Q1T7F1 81 aa5.16□□□□□ -1.58
CTNNA1-221ENST00000520339 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.16□□□□□ -1.58
CTNNA1-221ENST00000520339 C20orf197Q8N268 126 aa5.16□□□□□ -1.58
CTNNA1-221ENST00000520339 DHRS4-AS1Q9P1J3 65 aa5.16□□□□□ -1.58
CTNNA1-221ENST00000520339 TMEM256-PLSCR3K7ERE1 68 aa5.15□□□□□ -1.59
CTNNA1-221ENST00000520339 Q6ZQY7 126 aa5.15□□□□□ -1.59
CTNNA1-221ENST00000520339 ST20-AS1Q8NBB2 130 aa5.14□□□□□ -1.59
CTNNA1-221ENST00000520339 RBM12B-AS1Q9P1G2 102 aa5.14□□□□□ -1.59
CTNNA1-221ENST00000520339 JMJD7-PLA2G4BH0Y9G9 81 aa5.11□□□□□ -1.59
CTNNA1-221ENST00000520339 SPRR1BP22528 89 aa5.11□□□□□ -1.59
CTNNA1-221ENST00000520339 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
CTNNA1-221ENST00000520339 F8WEM9 126 aa5.1□□□□□ -1.59
CTNNA1-221ENST00000520339 IGLV5-48A0A075B6I7 105 aa5.08□□□□□ -1.6
CTNNA1-221ENST00000520339 IGKV3D-7A0A0C4DH55 119 aa5.08□□□□□ -1.6
CTNNA1-221ENST00000520339 C14orf132Q9NPU4 83 aa5.08□□□□□ -1.6
CTNNA1-221ENST00000520339 LINC00846Q9NV44 126 aa5.08□□□□□ -1.6
CTNNA1-221ENST00000520339 DEFB105AQ8NG35 78 aa5.07□□□□□ -1.6
CTNNA1-221ENST00000520339 A0A087WVE0 104 aa5.06□□□□□ -1.6
CTNNA1-221ENST00000520339 UBL5Q9BZL1 73 aa5.06□□□□□ -1.6
CTNNA1-221ENST00000520339 LOC110117498A0A087WWA1 95 aa5.05□□□□□ -1.6
CTNNA1-221ENST00000520339 TRBV7-4A0A0J9YYF1 115 aa5.05□□□□□ -1.6
CTNNA1-221ENST00000520339 CXCL6P80162 114 aa5.05□□□□□ -1.6
CTNNA1-221ENST00000520339 ATP11AUNQ6ZP68 121 aa5.05□□□□□ -1.6
CTNNA1-221ENST00000520339 LCA10Q71F78 164 aa5.05□□□□□ -1.6
CTNNA1-221ENST00000520339 C8orf87E5RJ46 101 aa5.04□□□□□ -1.6
CTNNA1-221ENST00000520339 PDE6GP18545 87 aa5.04□□□□□ -1.6
CTNNA1-221ENST00000520339 KRTAP19-2Q3LHN2 52 aa5.04□□□□□ -1.6
CTNNA1-221ENST00000520339 LIMD2Q9BT23 127 aa5.04□□□□□ -1.6
CTNNA1-221ENST00000520339 PCOTHQ58A44 107 aa5.03□□□□□ -1.6
CTNNA1-221ENST00000520339 Q6ZQT0 140 aa5.02□□□□□ -1.61
CTNNA1-221ENST00000520339 CYP4F30PQ9H0H9 118 aa5.02□□□□□ -1.61
CTNNA1-221ENST00000520339 hDV103S1A0JD37 113 aa5.01□□□□□ -1.61
CTNNA1-221ENST00000520339 C9orf92A6NGG3 77 aa5.01□□□□□ -1.61
CTNNA1-221ENST00000520339 C7orf65Q6ZTY9 151 aa5.01□□□□□ -1.61
CTNNA1-221ENST00000520339 IGLV8-61A0A075B6I0 122 aa5□□□□□ -1.61
CTNNA1-221ENST00000520339 TMEM254Q8TBM7 123 aa5□□□□□ -1.61
CTNNA1-221ENST00000520339 FSIP2Q5CZC0 6907 aa5□□□□□ -1.61
CTNNA1-221ENST00000520339 MT1HP80294 61 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms