RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 CD164Q04900 197 aa15.08■□□□□ 0
COL13A1-213ENST00000520267 A0A087X002 238 aa15.07■□□□□ 0
COL13A1-213ENST00000520267 NOTCH2NLQ7Z3S9 236 aa15.07■□□□□ 0
COL13A1-213ENST00000520267 SPINK6Q6UWN8 80 aa15.06■□□□□ 0
COL13A1-213ENST00000520267 PRR4Q16378 134 aa15.04■□□□□ -0
COL13A1-213ENST00000520267 C1orf64Q8NEQ6 169 aa15.04■□□□□ -0
COL13A1-213ENST00000520267 KRTAP13-2Q52LG2 175 aa15.03■□□□□ -0
COL13A1-213ENST00000520267 TP53AIP1Q9HCN2 124 aa15.01□□□□□ -0.01
COL13A1-213ENST00000520267 MRPL34Q9BQ48 92 aaKnown RBP15□□□□□ -0.01
COL13A1-213ENST00000520267 CYP4F30PQ9H0H9 118 aa14.99□□□□□ -0.01
COL13A1-213ENST00000520267 NDUFS5O43920 106 aa14.98□□□□□ -0.01
COL13A1-213ENST00000520267 SACSQ9NZJ4 4579 aa14.94□□□□□ -0.02
COL13A1-213ENST00000520267 BRK1Q8WUW1 75 aa14.94□□□□□ -0.02
COL13A1-213ENST00000520267 KRTAP1-4P0C5Y4 121 aa14.93□□□□□ -0.02
COL13A1-213ENST00000520267 VPS13BQ7Z7G8 4022 aa14.93□□□□□ -0.02
COL13A1-213ENST00000520267 SPANXA2-OT1Q8N9U9 137 aa14.9□□□□□ -0.02
COL13A1-213ENST00000520267 MPLKIPQ8TAP9 179 aa14.89□□□□□ -0.03
COL13A1-213ENST00000520267 PKHD1P08F94 4074 aa14.83□□□□□ -0.03
COL13A1-213ENST00000520267 C1orf195Q5TG92 126 aa14.82□□□□□ -0.04
COL13A1-213ENST00000520267 PCOTHQ58A44 107 aa14.81□□□□□ -0.04
COL13A1-213ENST00000520267 C8orf87E5RJ46 101 aa14.79□□□□□ -0.04
COL13A1-213ENST00000520267 PLA2G1BP04054 148 aaKnown RBP14.77□□□□□ -0.04
COL13A1-213ENST00000520267 Q5W150 140 aa14.75□□□□□ -0.05
COL13A1-213ENST00000520267 IGLV7-46A0A075B6I9 117 aa14.75□□□□□ -0.05
COL13A1-213ENST00000520267 LINC00313P59037 77 aa14.73□□□□□ -0.05
COL13A1-213ENST00000520267 KRTAP13-3Q3SY46 172 aa14.71□□□□□ -0.05
COL13A1-213ENST00000520267 TYMSOSQ8TAI1 123 aa14.71□□□□□ -0.06
COL13A1-213ENST00000520267 LIMD2Q9BT23 127 aa14.69□□□□□ -0.06
COL13A1-213ENST00000520267 DYNC1H1Q14204 4646 aaKnown RBP14.69□□□□□ -0.06
COL13A1-213ENST00000520267 Q1T7F1 81 aa14.68□□□□□ -0.06
COL13A1-213ENST00000520267 V9GYY9 64 aa14.67□□□□□ -0.06
COL13A1-213ENST00000520267 A0A1B0GVY2 172 aa14.66□□□□□ -0.06
COL13A1-213ENST00000520267 SMR3BP02814 79 aaPredicted RBP14.65□□□□□ -0.06
COL13A1-213ENST00000520267 C4orf48Q5BLP8 95 aa14.64□□□□□ -0.07
COL13A1-213ENST00000520267 LOC101927531A0A1B0GV80 90 aa14.63□□□□□ -0.07
COL13A1-213ENST00000520267 Q8N9P0 234 aaPredicted RBP14.61□□□□□ -0.07
COL13A1-213ENST00000520267 PRR26Q8N8Z3 221 aa14.59□□□□□ -0.07
COL13A1-213ENST00000520267 KRTAP16-1A8MUX0 517 aa14.59□□□□□ -0.07
COL13A1-213ENST00000520267 SPINK1P00995 79 aa14.58□□□□□ -0.08
COL13A1-213ENST00000520267 COA5Q86WW8 74 aa14.58□□□□□ -0.08
COL13A1-213ENST00000520267 RETNLBQ9BQ08 111 aa14.54□□□□□ -0.08
COL13A1-213ENST00000520267 SEC61GP60059 68 aa14.53□□□□□ -0.08
COL13A1-213ENST00000520267 APOBP04114 4563 aaKnown RBP14.52□□□□□ -0.08
COL13A1-213ENST00000520267 RYR2Q92736 4967 aa14.52□□□□□ -0.09
COL13A1-213ENST00000520267 FAM229AH3BQW9 127 aa14.52□□□□□ -0.09
COL13A1-213ENST00000520267 LINC00304Q8N9R0 145 aa14.5□□□□□ -0.09
COL13A1-213ENST00000520267 KRTAP10-4P60372 401 aaPredicted RBP14.48□□□□□ -0.09
COL13A1-213ENST00000520267 PSPHP1O15172 72 aa14.47□□□□□ -0.09
COL13A1-213ENST00000520267 FAT1Q14517 4588 aa14.46□□□□□ -0.1
COL13A1-213ENST00000520267 HRES1P13985 223 aa14.43□□□□□ -0.1
COL13A1-213ENST00000520267 PMAIP1Q13794 54 aa14.42□□□□□ -0.1
COL13A1-213ENST00000520267 RPS29P62273 56 aaKnown RBP14.41□□□□□ -0.1
COL13A1-213ENST00000520267 SPAG11AQ6PDA7 123 aa14.4□□□□□ -0.1
COL13A1-213ENST00000520267 A8MUN3 132 aa14.39□□□□□ -0.11
COL13A1-213ENST00000520267 IGKV2-30P06310 120 aa14.39□□□□□ -0.11
COL13A1-213ENST00000520267 KMT2CQ8NEZ4 4911 aaKnown RBP14.36□□□□□ -0.11
COL13A1-213ENST00000520267 PKHD1L1Q86WI1 4243 aa14.33□□□□□ -0.12
COL13A1-213ENST00000520267 Q5VV11 94 aa14.29□□□□□ -0.12
COL13A1-213ENST00000520267 PRR15LQ9BU68 103 aa14.26□□□□□ -0.13
COL13A1-213ENST00000520267 IGKV2D-30A0A075B6S6 120 aa14.24□□□□□ -0.13
COL13A1-213ENST00000520267 ACYP2P14621 99 aa14.24□□□□□ -0.13
COL13A1-213ENST00000520267 DMAC1Q96GE9 116 aa14.24□□□□□ -0.13
COL13A1-213ENST00000520267 A8MU10 97 aa14.19□□□□□ -0.14
COL13A1-213ENST00000520267 LINC01558Q9Y6Z2 57 aa14.17□□□□□ -0.14
COL13A1-213ENST00000520267 C9orf92A6NGG3 77 aa14.13□□□□□ -0.15
COL13A1-213ENST00000520267 CHKB-CPT1BH3BT56 60 aa14.13□□□□□ -0.15
COL13A1-213ENST00000520267 Q75L30 129 aa14.1□□□□□ -0.15
COL13A1-213ENST00000520267 C7orf65Q6ZTY9 151 aa14.03□□□□□ -0.16
COL13A1-213ENST00000520267 C20orf166-AS1Q96NR2 134 aa14.03□□□□□ -0.16
COL13A1-213ENST00000520267 A8MUU9 505 aa14.02□□□□□ -0.16
COL13A1-213ENST00000520267 RYR3Q15413 4870 aa13.98□□□□□ -0.17
COL13A1-213ENST00000520267 LCA10Q71F78 164 aa13.98□□□□□ -0.17
COL13A1-213ENST00000520267 HSPG2P98160 4391 aa13.98□□□□□ -0.17
COL13A1-213ENST00000520267 KTN1-AS1Q86SY8 53 aa13.97□□□□□ -0.17
COL13A1-213ENST00000520267 FLG2Q5D862 2391 aaPredicted RBP13.97□□□□□ -0.17
COL13A1-213ENST00000520267 ATP11AUNQ6ZP68 121 aa13.97□□□□□ -0.17
COL13A1-213ENST00000520267 Q8N1X5 172 aa13.97□□□□□ -0.17
COL13A1-213ENST00000520267 Q5VSD8 79 aa13.95□□□□□ -0.18
COL13A1-213ENST00000520267 A6NED7 52 aa13.94□□□□□ -0.18
COL13A1-213ENST00000520267 TNXBP22105 4242 aa13.92□□□□□ -0.18
COL13A1-213ENST00000520267 LRP1Q07954 4544 aaKnown RBP13.92□□□□□ -0.18
COL13A1-213ENST00000520267 KRTAP10-8P60410 259 aa13.9□□□□□ -0.18
COL13A1-213ENST00000520267 SPTSSBQ8NFR3 76 aa13.89□□□□□ -0.19
COL13A1-213ENST00000520267 A6NN06 94 aa13.86□□□□□ -0.19
COL13A1-213ENST00000520267 CDC42SE1Q9NRR8 79 aa13.86□□□□□ -0.19
COL13A1-213ENST00000520267 FAT3Q8TDW7 4589 aa13.85□□□□□ -0.19
COL13A1-213ENST00000520267 SPINK7P58062 85 aa13.85□□□□□ -0.19
COL13A1-213ENST00000520267 KRTAP17-1Q9BYP8 105 aa13.84□□□□□ -0.19
COL13A1-213ENST00000520267 RYR1P21817 5038 aa13.83□□□□□ -0.2
COL13A1-213ENST00000520267 RBM12B-AS1Q9P1G2 102 aa13.8□□□□□ -0.2
COL13A1-213ENST00000520267 A0A1B0GU69 56 aa13.74□□□□□ -0.21
COL13A1-213ENST00000520267 KRTAP3-1Q9BYR8 98 aa13.66□□□□□ -0.22
COL13A1-213ENST00000520267 KIAA1109Q2LD37 5005 aa13.64□□□□□ -0.23
COL13A1-213ENST00000520267 DMBT1Q9UGM3 2413 aaPredicted RBP13.59□□□□□ -0.23
COL13A1-213ENST00000520267 MT1HL1P0DM35 61 aa13.55□□□□□ -0.24
COL13A1-213ENST00000520267 RPL37P61927 97 aaKnown RBP13.51□□□□□ -0.25
COL13A1-213ENST00000520267 XP32Q5T750 250 aa13.5□□□□□ -0.25
COL13A1-213ENST00000520267 MYCBP2O75592 4640 aa13.48□□□□□ -0.25
COL13A1-213ENST00000520267 EPPK1P58107 5090 aaKnown RBP13.48□□□□□ -0.25
COL13A1-213ENST00000520267 COX6B2Q6YFQ2 88 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms